LOCUS AL832326 5280 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp451E015 (from clone DKFZp451E015);
complete cds.
ACCESSION AL832326
VERSION AL832326.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5280)
AUTHORS Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (13-MAY-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by BMFZ (Biomedical Research Center at the
Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
sequencing consortium of the German Genome Project.
This clone (DKFZp451E015) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..5280
/db_xref="H-InvDB:HIT000027238"
/organism="Homo sapiens"
/map="240.2 cR from top of Chr14 linkage group"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="451 (synonym: hlcc1). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp451E015"
/tissue_type="human skeletal muscle"
/db_xref="taxon:9606"
CDS 372..2399
/codon_start=1
/gene="DKFZp451E015"
/product="hypothetical protein"
/note="similar to PALS1 (Mus musculus)"
/db_xref="GOA:Q8N3R9"
/db_xref="H-InvDB:HIT000027238.17"
/db_xref="HGNC:HGNC:18669"
/db_xref="InterPro:IPR001452"
/db_xref="InterPro:IPR001478"
/db_xref="InterPro:IPR004172"
/db_xref="InterPro:IPR008144"
/db_xref="InterPro:IPR008145"
/db_xref="InterPro:IPR014775"
/db_xref="InterPro:IPR015145"
/db_xref="InterPro:IPR020590"
/db_xref="InterPro:IPR027417"
/db_xref="InterPro:IPR031185"
/db_xref="InterPro:IPR035601"
/db_xref="InterPro:IPR036028"
/db_xref="InterPro:IPR036034"
/db_xref="InterPro:IPR036892"
/db_xref="PDB:1Y76"
/db_xref="PDB:3UIT"
/db_xref="PDB:4UU5"
/db_xref="PDB:4UU6"
/db_xref="PDB:4WSI"
/db_xref="UniProtKB/Swiss-Prot:Q8N3R9"
/protein_id="CAD38620.1"
/translation="MTTSHMNGHVTEESDSEVKNVDLASPEEHQKHREMAVDCPGDLG
TRMMPIRRSAQLERIRQQQEDMRRRREEEGKKQELDLNSSMRLKKLAQIPPKTGIGNP
MFDTEEGIVLESPHYAVKILEIEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNKDFQ
NAFKIHNAITVHMNKASPPFPLISNAQDLAQEVQTVLKPVHHKEGQELTALLNTPHIQ
ALLLAHDKVAEQEMQLEPITDERVYESIGQYGGETVKIVRIEKARDIPLGATVRNEMD
SVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIP
SQQIKPPPAKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQA
YREGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKVLY
NANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQRLMNKEKDRFA
SAVPHTTRSRRDQEVAGRDYHFVSRQAFEADIAAGKFIEHGEFEKNLYGTSIDSVRQV
INSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEVKNPKPEELREI
IEKTREMEQSNGHYFDTAIVNSDLDKAYQELLRLINKLDTEPQWVPSTWLR"
regulatory 5225..5230
/regulatory_class="polyA_signal_sequence"
polyA_site 5261
BASE COUNT 1687 a 901 c 1110 g 1582 t
ORIGIN
1 actaaggatt ctgaggtggg gagtcgggag tttctggatt ctttatccgg aatttcaagg
61 gccgccggag ggctgtcgct tctgcagtgc gtaggagcgg ccggggcggg aggctccgcg
121 gagccgaggc gtggagaata agaaagcctt gagttttgtg aaaaaccgga gaagagaaac
181 taaaaggaca gtagaaaagg cttttccagt ttgcataata tttccttcat ggatactttt
241 tcatagcatt attatgtgat gtgagaagtt ttttttttga agtaacatgg attttatact
301 acagaatcaa gagaattggc ttataggaaa aattgattta taaaaagtgg tacaggtttt
361 catagataac catgacaaca tcccatatga atgggcatgt tacagaggaa tcagacagcg
421 aagtaaaaaa tgttgatctt gcatcaccag aggaacatca gaagcaccga gagatggctg
481 ttgactgccc tggagatttg ggcaccagga tgatgccaat acgtcgaagt gcacagttgg
541 agcgtattcg gcaacaacag gaggacatga ggcgtaggag agaggaagaa gggaaaaagc
601 aagaacttga ccttaattct tccatgagac ttaagaaact agcccaaatt cctccaaaga
661 ccggaatagg taaccctatg tttgatacag aggaaggaat tgtcttagaa agtcctcatt
721 atgctgtgaa aatattagaa atagaagact tgttttcttc acttaaacat atccaacata
781 ctttggtaga ttctcagagc caggaggata tttcactgct tttacaactt gttcaaaata
841 aggatttcca gaatgcattt aagatacaca atgccatcac agtacacatg aacaaggcca
901 gtcctccatt tcctcttatc tccaacgcac aagatcttgc tcaagaggta caaactgttt
961 tgaagccagt tcatcataag gaaggacaag aactaactgc tttgctgaat actccacata
1021 ttcaggcact tttactggcc cacgataagg ttgctgagca ggaaatgcag ctagagccca
1081 ttacagatga gagagtttat gaaagtatcg gccagtatgg aggagaaact gtaaaaatag
1141 ttcgtataga aaaggctcgt gatattccgt tgggtgctac agttcgtaat gaaatggact
1201 ctgtcatcat tagccggata gtaaaagggg gtgctgcaga gaaaagtggt ctgttgcatg
1261 aaggagatga agttctagag attaatggca ttgaaattcg ggggaaagat gtcaatgagg
1321 tttttgactt gttgtctgat atgcatggta ctttgacttt tgtcctgatt cccagtcaac
1381 agatcaagcc gcctcctgcc aaggaaacag taatccatgt aaaagctcat tttgactatg
1441 acccctcaga tgacccttat gttccatgtc gagagttagg tctgtctttt caaaaaggtg
1501 atatacttca tgtgatcagt caagaagatc caaactggtg gcaggcctac agggaagggg
1561 acgaagataa tcaacctcta gccgggcttg ttccagggaa aagctttcag cagcaaaggg
1621 aagccatgaa acaaaccata gaagaagata aggagccaga aaaatcagga aaactgtggt
1681 gtgcaaagaa gaataaaaag aagaggaaaa aggttttata taatgccaat aaaaatgatg
1741 attatgacaa cgaggagatc ttaacctatg aggaaatgtc actttatcat cagccagcaa
1801 ataggaagag acctatcatc ttgattggtc cacagaactg tggccagaat gaattgcgtc
1861 agaggctcat gaacaaagaa aaggaccgct ttgcatctgc agttcctcat acaacccgga
1921 gtaggcgaga ccaagaagta gccggtagag attaccactt tgtttcgcgg caagcattcg
1981 aggcagacat agcagctgga aagttcattg agcatggtga atttgagaag aatttgtatg
2041 gaactagcat agattctgta cggcaagtga tcaactctgg caaaatatgt cttttaagtc
2101 ttcgtacaca gtcattgaag actctccgga attcagattt gaaaccatat attatcttca
2161 tcgcaccccc ttcacaagaa agacttcggg cattattggc caaagaagtc aagaatccaa
2221 agcctgaaga gttgagagaa atcattgaga agacaagaga gatggagcag agcaatggcc
2281 actactttga tacggcaatt gtgaattccg atcttgataa agcctatcag gaattgctta
2341 ggttaattaa caaacttgat actgaacctc agtgggtacc atccacttgg ctgaggtgaa
2401 agaaacatcc attctgtggc atgttggact tgatctggca aaaactgcca ataggaggac
2461 tgcccgacac tgcagcaaga ttgaggataa gatggaaggc agcagtataa gctgtagatc
2521 tgttcttaga tctcttgaat tagtgagacg acagttccct taggcagttt gtgcatggca
2581 tcctttattc tctatacatg gctttagcgg ttcttgcctc attttgggat tctaaatgga
2641 agctttcaac agagcattcc attttgtcct gttaaaacct tttgttttca cctaaaccct
2701 ttctgcttag ttgtatctct gtgaaaaact tgtatacaca agcgtccatg tctcacacaa
2761 atattgatgt gattattctt aagtgttaaa tcattaacac ttaaatgact tcattgggaa
2821 tattgagcag agggactgtg cttctatgca ctgggcaagg cagtatttgc ttaggaaact
2881 aatttagtca tcagagatac tttcctaaaa aggaaaaata aaaaacaaaa tggtgccact
2941 ttgggttgaa gctactttgt taggcttgaa ttcatttata tgtcttttga ttcttaaaaa
3001 aacaaaaaac attccattag aagcaccagt ttttttgctc agactttgtg gatcagactc
3061 tacactcaac acactctaat ctacttaaag gtatacaaaa tatgctgatc ttttttaaat
3121 tatgatttcc tgaatttttt tcttaagtcg tctcaactga tttactcact tagcttccct
3181 tccctcatca gcatagtata atagaatgta tgttacattt ttatgaatgg caggtgttca
3241 ttataatctg tattgactta aaaagtttct tcctcatgat gctaatagtt ttttgtatac
3301 atgggaggat agcacatttg acagtttttg catttttatg tatgagcaca gtatcctatg
3361 actgtgctac gtatatatag gtaataaact ggaattctgt tgatgaatat agctgctgta
3421 ctgtatatta atatttaata gatcaacaaa tggtcattga aaacacttgt ttagcattag
3481 aataaaatta tatatgtcct tgggaaatat tatgacagtt gactttaaga tcaaaaggaa
3541 gggaagacct gaaagtcatt tgaacatttt aggaaaagaa tattggagag aaaaaggtat
3601 taaatatata gaaataggtt tttaacctaa caaggtctgc ctcttatgac gagaatgcaa
3661 cagcttggta aatcataaaa gaaacattta agctaatagg attttcgtac tgtctctata
3721 gctgtagctt taaaattcaa cgtatataat tggcatggaa acttaatttg cagtcttttc
3781 aagcctttag gatagtgtga tgtgtaacaa acaacctcaa atgtgaatgc cttgatttta
3841 tttttatggt gactttagct acagcatttc ctatacccag agctaaacac tggaataata
3901 ctgacatcat ttaatttaac ataagcaatt atgtttaagg agtaatttgt gtcatgtaca
3961 tatttgattg attttttttc ttctacataa ttttatttga acaaatgtag acagtttata
4021 tgtcgccttt ttctgttcaa atttgcatgg cctattaagt tggctggaga gtgttttatg
4081 tggaaatatt ttcaagataa tgttccttag gaagaaaata acattcttgg gttgagggaa
4141 ggaatgccat acactactgt ctcttcagat ctgaaatact ccagtttaga gccaggaaat
4201 ttcacaggtc acaccgattt ttagcattaa aaactaagga atatacttag cacttactta
4261 atcttttcag ttttccagtt tacgtctcag gaatgaagtg tagtctatgg ttgacaatgg
4321 agttttgtga tcctgcttat tgtaactgac aactgttttc aactccaaga gctaaactat
4381 tggcagttca tgttaagtta gagtgagggt gtaggtagtg tcagtgagtg gctcttgtgc
4441 ctgctgtaga cattaggcct gcactagggc catgtgctgt caagattcag gaacatggct
4501 ttaacaagca gatcttgtat caaggcagag gtgatgccat gccatacttt taggaagtct
4561 gagatgataa atatttcaag gtcagtgaag tctatcaatc attctcccct tcctcatcag
4621 caatggtaga tagaaatgtc ctaaactttt ctaaatccta gtgatgagga tgtgctgata
4681 ttcaacatag tccttaaagt gaaaactgag ttgttgctga cctccacaaa agaatatgga
4741 aaaaagcctt gctgtacacc tagttgtaca gccactctgg ccaattccat ttcctgtccc
4801 tctgtggttc tgactggaga ccccagtgtg ggggaggtct taccatttaa tatagaaatg
4861 atatcaataa ctaatgctat gtacttggaa aatccaaata aggaagtttt aggttggtgc
4921 ataactttgt ttctcaaatt ttcgttgtca gaacaaatgg aaggagaata ttatttagac
4981 taatccagat ttgctttcta tgaaaatcta atgtctggat tatcttcctt ttctcatggc
5041 ctaagaaata aggatcaata aggaatgatt tgaatgtaat tttgtgaatg tgtggaaaat
5101 ataaagcagg gatttagcct taataaaggt aaccttctga catctgttgt taatccccct
5161 ttgtactctt ttcctgtatc tgcactgtta ttttgagatg tcatactgta cactgtattg
5221 taaaaataaa aagtaaaatt atatttcaaa ttttaaaagc caaaaaaaaa aaaaaaaaaa
//