LOCUS AL713696 4539 bp mRNA linear HTC 21-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp547C058 (from clone DKFZp547C058).
ACCESSION AL713696
VERSION AL713696.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4539)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp547C058) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp547C058
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4539
/db_xref="H-InvDB:HIT000026621"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="547 (synonym: hfbr1). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp547C058"
/tissue_type="brain"
/note="bromodomain and PHD finger-containing protein 1"
/db_xref="taxon:9606"
CDS 230..3871
/codon_start=1
/gene="DKFZp547C058"
/product="hypothetical protein"
/db_xref="GOA:P55201"
/db_xref="H-InvDB:HIT000026621.17"
/db_xref="HGNC:HGNC:14255"
/db_xref="InterPro:IPR000313"
/db_xref="InterPro:IPR001487"
/db_xref="InterPro:IPR001965"
/db_xref="InterPro:IPR011011"
/db_xref="InterPro:IPR013083"
/db_xref="InterPro:IPR013087"
/db_xref="InterPro:IPR018359"
/db_xref="InterPro:IPR019542"
/db_xref="InterPro:IPR019786"
/db_xref="InterPro:IPR019787"
/db_xref="InterPro:IPR034732"
/db_xref="InterPro:IPR035502"
/db_xref="InterPro:IPR036427"
/db_xref="InterPro:IPR042008"
/db_xref="InterPro:IPR042061"
/db_xref="PDB:2D9E"
/db_xref="PDB:2RS9"
/db_xref="PDB:2X35"
/db_xref="PDB:2X4W"
/db_xref="PDB:2X4X"
/db_xref="PDB:2X4Y"
/db_xref="PDB:3L42"
/db_xref="PDB:3MO8"
/db_xref="PDB:4LC2"
/db_xref="PDB:4QYD"
/db_xref="PDB:4QYL"
/db_xref="PDB:4UYE"
/db_xref="PDB:5C6S"
/db_xref="PDB:5C7N"
/db_xref="PDB:5C85"
/db_xref="PDB:5C87"
/db_xref="PDB:5C89"
/db_xref="PDB:5D7X"
/db_xref="PDB:5DY7"
/db_xref="PDB:5DYA"
/db_xref="PDB:5DYC"
/db_xref="PDB:5E3D"
/db_xref="PDB:5E3G"
/db_xref="PDB:5EM3"
/db_xref="PDB:5EPR"
/db_xref="PDB:5EPS"
/db_xref="PDB:5EQ1"
/db_xref="PDB:5ERC"
/db_xref="PDB:5ETB"
/db_xref="PDB:5ETD"
/db_xref="PDB:5EV9"
/db_xref="PDB:5EVA"
/db_xref="PDB:5EWC"
/db_xref="PDB:5EWD"
/db_xref="PDB:5EWH"
/db_xref="PDB:5EWV"
/db_xref="PDB:5EWW"
/db_xref="PDB:5FFV"
/db_xref="PDB:5FFW"
/db_xref="PDB:5FFY"
/db_xref="PDB:5FG4"
/db_xref="PDB:5FG5"
/db_xref="PDB:5G4R"
/db_xref="PDB:5G4S"
/db_xref="PDB:5MWG"
/db_xref="PDB:5MWH"
/db_xref="PDB:5MWZ"
/db_xref="PDB:5MYG"
/db_xref="PDB:5O4S"
/db_xref="PDB:5O4T"
/db_xref="PDB:5O55"
/db_xref="PDB:5O5A"
/db_xref="PDB:5O5F"
/db_xref="PDB:5O5H"
/db_xref="PDB:5OV8"
/db_xref="PDB:5OWA"
/db_xref="PDB:5OWB"
/db_xref="PDB:5OWE"
/db_xref="PDB:5T4U"
/db_xref="PDB:5T4V"
/db_xref="PDB:6EKQ"
/db_xref="UniProtKB/Swiss-Prot:P55201"
/protein_id="CAD28495.1"
/translation="MGVDFDVKTFCHNLRATKPPYECPVETCRKVYKSYSGIEYHLYH
YDHDNPPPPQQTPLRKHKKKGRQSRPANKQSPSPSEVSQSPGREVMSYAQAQRMVEVD
LHGRVHRISIFDNLDVVSEDEEAPEEAPENGSNKENTETPAATPKSGKHKNKEKRKDS
NHHHHHNVSASTTPKLPEVVYRELEQDTPDAPPRPTSYYRYIEKSAEELDEEVEYDMD
EEDYIWLDIMNERRKTEGVSPIPQEIFEYLMDRLEKESYFESHNKGDPNALVDEDAVC
CICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRCLQSPSRAVDCALCP
NKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQR
GSGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETGANGTSFSVRKTAYCDIHTPP
GSARRLPALSHSEGEEDEDEEEDEGKGWSSEKVKKAKAKSRIKMKKARKILAEKRAAA
PVVSVPCIPPHRLSKITNRLTIQRKSQFMQRLHSYWTLKRQSRNGVPLLRRLQTHLQS
QRNCDQVGRDSEDKNWALKEQLKSWQRLRHDLERARLLVELIRKREKLKRETIKVQQI
AMEMQLTPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNL
EAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQGGAVLRQARRQAEKMG
IDFETGMHIPHSLAGDEATHHTEDAEEERLVLLENQKHLPVEEQLKLLLERLDEVNAS
KQSVGRSRRAKMIKKEMTALRRKLAHQRETGRDGPERHGPSSRGSLTPHPAACDKDGQ
TDSAAEESSSQETSKGLGPNMSSTPAHEVGRRTSVLFSKKNPKTAGPPKRPGRPPKNR
ESQMTPSHGGSPVGPPQLPIMSSLRQRKRGRSPRPSSSSDSDSDKSTEDPPMDLPANG
FSGGNQPVKKSFLVYRNDCSLPRSSSDSESSSSSSSSAASDRTSTTPSKQGRGKPSFS
RGTFPEDSSEDTSGTENEAYSVGTGRGVGHSMVRKSLGRGAGWLSEDEDSPLDALDLV
WAKCRGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLF
FDNKRTWQWLPRTKLVPLGVNQDLDKEKMLEGRKSNIRKSVQIAYHRALQHRSKVQGE
QSSETSDSD"
BASE COUNT 1134 a 1295 c 1308 g 802 t
ORIGIN
1 cccagggcgc cggcgggacc aggagcggca ggggtcagct caggaatccc ggggagccgg
61 gaccaaagcg tggggcggca gggggccggg gtggcgaggt ctacggtctc cggagttggg
121 gctccccctt cccggcccga ctttccccgc cgacctcccc aagtggggtc ggagccccgg
181 cgggcgcccc cggcgatgag cccggactcg aggtggccga tgtgacagca tgggggtgga
241 ctttgatgtg aagactttct gccacaactt gcgggcgact aagccaccat acgagtgccc
301 ggtggagacc tgccgaaagg tctacaagag ttacagtggt attgagtacc acctgtacca
361 ctatgaccac gacaacccac cacccccaca acaaactcca ctccgcaagc acaagaaaaa
421 ggggcgccag tcacgcccag ccaacaagca gtcacccagc ccctcagagg tctcacagtc
481 accaggccgt gaggtgatga gctatgcaca ggcccagcgc atggtggagg tggacttgca
541 tggccgcgtc caccgcatca gcatctttga caacctggat gtggtgtcag aggatgagga
601 agcccccgag gaggcccctg agaatggcag caacaaggag aacactgaga caccagctgc
661 tactcccaag tcaggcaaac ataagaacaa ggagaagcgc aaggactcca accatcacca
721 ccaccacaat gtttctgcga gcaccactcc caagctgcca gaggtggtct atcgggagct
781 ggaacaggac acccctgatg ccccaccccg gccaacttcc tattaccggt acatcgagaa
841 gtctgcagag gagctggacg aggaagtaga gtatgacatg gacgaggagg actacatctg
901 gctggatatc atgaatgagc gtcggaagac agagggtgta agtcccatcc cgcaggagat
961 ctttgagtac ctaatggacc gactggagaa ggagtcgtac tttgagagtc ataataaagg
1021 cgaccctaat gcgctagtgg acgaggatgc tgtttgctgt atctgcaatg atggtgagtg
1081 ccagaacagc aatgtcatcc tcttctgtga catgtgcaac ctggccgtgc accaggagtg
1141 ctacggtgtc ccctatatcc ctgagggcca gtggctgtgc cgccgttgcc tgcagtcacc
1201 ctctcgtgct gtggattgtg ccctgtgccc caacaagggc ggtgccttca agcagacaga
1261 tgacgggcgc tgggcccatg tggtgtgtgc cttgtggatc cctgaggtct gcttcgccaa
1321 cacggtcttc ctagagccta ttgacagcat tgagcacatc ccaccagctc gctggaagct
1381 cacctgctac atttgcaaac aacggggctc aggggcctgc atccagtgcc acaaggccaa
1441 ctgttacaca gctttccatg tgacatgcgc ccagcaggct ggcctttaca tgaagatgga
1501 gcctgtgcgg gagacaggcg ccaacggcac ctctttcagt gtccgcaaga cagcctactg
1561 cgacatccac acgcctccag gttcagcacg ccgactgcct gccctgtccc acagcgaggg
1621 tgaggaggat gaagatgagg aggaggatga gggtaagggc tggagctcag agaaagtcaa
1681 gaaggccaag gccaagtccc ggatcaaaat gaagaaggca cggaagatcc tggcagagaa
1741 gcgggcagca gcacctgtgg tgtcagtgcc ctgcatccca ccacacaggc ttagtaaaat
1801 caccaaccgc ctgaccatcc aaaggaagag ccagttcatg cagaggctgc acagctactg
1861 gacactgaag cggcagtcac ggaatggggt cccattgcta cgtcgcctgc agacacacct
1921 gcaatctcag aggaactgtg accaagttgg gagagattct gaggataaga actgggccct
1981 taaagaacag ctcaagtcct ggcagcggct ccggcatgac ttggagcgag ctcggctgct
2041 cgtggaattg atccgcaagc gggaaaaact caaaagggag acgatcaagg ttcagcagat
2101 tgccatggag atgcagctga ctcctttcct catcctcctt cgcaaaacct tggagcagct
2161 ccaagagaag gacacaggca acatcttcag cgagccggtc cctctgtctg aggtacctga
2221 ctacctagac cacatcaaaa agcccatgga ctttttcacc atgaagcaga acttggaggc
2281 ttaccgctac ctgaattttg atgattttga ggaggacttc aacctcatcg tcagcaactg
2341 cctcaagtat aacgccaagg acaccatctt ctaccgggca gcagtgcggc ttcgtgagca
2401 gggtggtgct gtgctccgcc aggcccggcg ccaggcagaa aaaatgggca ttgactttga
2461 gacgggcatg catatccccc acagcctggc tggagatgag gccacacacc acactgaaga
2521 tgccgaggaa gagcggctgg tcttgctgga gaaccagaag cacctgccag tggaagaaca
2581 gctaaagctg cttctggagc ggctggacga agtgaatgcc agcaagcaga gtgtgggccg
2641 ctcacggcgt gcaaagatga tcaagaaaga gatgacggca ctgcggcgga agcttgccca
2701 tcagcgagag acgggacgtg atggccctga gcggcatggc ccctcgagcc ggggtagtct
2761 gacaccccac ccggcagcct gtgacaagga tgggcagaca gatagtgcgg cagaggagag
2821 cagcagccag gagacaagca aaggcctggg tcccaacatg tcctcaaccc ccgcacatga
2881 ggtgggcagg agaacctcag ttctgttctc caaaaagaac ccgaagacag ctggaccgcc
2941 caagaggccg ggccggcccc ccaaaaaccg ggagagccag atgaccccca gccacggagg
3001 cagtcctgtg gggccccccc agctccccat catgagttcc ctgcgtcagc gcaagcgggg
3061 taggagcccc cggcccagtt cgagctcaga cagcgacagt gataagtcca cagaagaccc
3121 cccaatggac ttaccagcca atggcttcag cggtggaaac caaccagtga agaagagttt
3181 cttggtatac cgtaatgact gcagccttcc ccggagcagc tcagactctg agtccagcag
3241 cagtagcagt agcagcgctg cttcagaccg gaccagcaca acgccctcaa aacaaggccg
3301 gggcaaaccc tccttctctc ggggcacttt cccagaggac agcagtgagg atacctcagg
3361 cactgagaat gaggcctact ccgtgggcac tggccgcggc gtgggccaca gcatggtaag
3421 gaagagtctg ggccggggag ctggctggct gtcagaggat gaggactccc cgctggatgc
3481 tctggacctc gtgtgggcca aatgccgagg ctatccatca tacccagctc tgatcattga
3541 tccaaagatg ccccgagaag gtatgttcca ccatggggtt cccatccctg tgcccccact
3601 ggaggtgctg aaacttgggg agcagatgac ccaggaagcc cgagagcatc tctacctcgt
3661 cctcttcttt gacaacaaac gaacctggca gtggctgccc aggaccaagc tggttcctct
3721 gggtgtgaac caggacctag acaaggagaa gatgctggag ggccgcaagt ccaacatccg
3781 caagtcagta cagatcgcct accacagggc tctgcagcac cgcagcaagg tgcaaggcga
3841 gcagagcagt gagaccagcg atagtgattg atactgctca acacagccca acctatagtg
3901 ccctgtgact tctctcctcc cctttgctca ctgtcctgga gtggcaccgg cctctgcact
3961 gactcatttc tggtcttggg gccagtctca ggggaagctg ggtgggggag gtccctcctg
4021 ccctaagtgc agctggactg tacagaacac tccaagggcc aatggcagtt cagcgcaagg
4081 agagggaggg cccacaggtc agaaaaagct ccagagacct cacagcattg tagggcgggg
4141 tggtgggcca aagttaggac actgcgtaaa acaggccatc ccaccacctc tacctgctca
4201 tgccaggaga atccataact gcctagaggc ctggggcccc taccggtcgt gaggtgagtg
4261 ggcatctgtc cagcctggaa gaggggcact aggtgactcc ctcccctgct gttgtaaata
4321 ctgtaattat cggagaattt aaattattct catttgtaac tgcgtttccg ggtcgcgcca
4381 gagtcatttg gtactaaaaa aaaaaaaaaa aaaagactgg gggctgtccc catttccctt
4441 ctctttccca tagattcccc cacctttcaa actggtttgt atttatttca aaggaagaaa
4501 atatattgat tcttagaaaa tgaaaaaaaa aaaaaaaaa
//