LOCUS AL355192 2043 bp mRNA linear HUM 15-OCT-2008
DEFINITION Novel human gene mapping to chomosome 22.
ACCESSION AL355192
VERSION AL355192.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2043)
AUTHORS Goward M.E., Huckle E.J.
JOURNAL Submitted (25-APR-2000) to the INSDC. E-mail contact:
humquery@sanger.ac.uk
COMMENT This cDNA sequence was assembled from public domain ESTs and single
pass sequencing reads from expressed DNA templates, aligned to the
genomic DNA sequence from the bacterial clones 181C9 (Z98743),
116F5
(Z93244) and 127B20 (Z83838) .
The EST sequences listed match this sequence with an identity
of at least 95% between the coordinates shown.
Further information can be found at
http://www.sanger.ac.uk/HGP/Chr22/
Sanger Centre name : ARHGAP8
FEATURES Location/Qualifiers
source 1..2043
/db_xref="H-InvDB:HIT000250335"
/organism="Homo sapiens"
/chromosome="22"
/mol_type="mRNA"
/db_xref="taxon:9606"
exon 1..134
/number=1
misc_feature join(1..74,80..146)
/note="matches EST AA073534 from clone IMAGE:535166"
CDS 1..1932
/product="hypothetical protein"
/db_xref="H-InvDB:HIT000250335.14"
/protein_id="CAB90248.1"
/translation="MRTLRRLKFMSSPSLSDLGKREPAAAADERGTQQRRACANATWN
SIHNGVIAVFQRKGLPDQELFSLNEGVRQLLKTELGSFFTEYLQNQLLTKGMVILRDK
IRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNAITLSV
KLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTYGLH
SSEGPFTHSCILELQRDKAAAAAVLGAVRKRPSVVPMAGQDPALSTSHPFYDVARHGI
LQVAGDDRFGRRVVTFSCCRMPPSHELDHQRLLEYKKNLKALYVVHPTSFIKVLWNIL
KPLISHKFGKKVIYFNYLSELHEHLKYDQLVIPPEVLRYDEKLQSLHEGRTPPPTKTP
PPRPPLPTQQFGVSLQYLKDKNQGELIPPVLRFTVTYLREKGLRTEGLFRRSASVQTV
REIQRLYNQGKPVNFDDYGDIHIPAVILKTFLRELPQPLLTFQAYEQILGITCVESSL
RVTGCRQILRSLPEHNYVVLRYLMGFLHAVSRESIFNKMNSSNLACVFGLNLIWPSQG
VSSLSALVPLNMFTELLIEYYEKIFSTPEAPGEHGLAPWEQGSRAAPLQEAVPRTQAT
GLTKPTLPPSPLMAARRRL"
exon 135..215
/number=2
exon 216..264
/number=3
misc_feature 216..322
/note="matches EST H55372 from clone C22_392"
exon 265..322
/number=4
misc_feature complement(322..406)
/note="matches EST AI907607"
exon 323..414
/number=5
misc_feature join(323..473,470..514)
/note="matches EST H55227 from clone C22_209"
exon 415..555
/number=6
exon 556..691
/number=7
misc_feature 691..921
/note="matches EST H61325 from clone IMAGE:236184"
misc_feature 691..842
/note="matches EST AW673087 from clone IMAGE:2900625"
exon 692..841
/number=8
misc_feature 726..757
/note="matches EST AW062317"
misc_feature complement(811..901)
/note="matches EST AA594317 from clone IMAGE:1058180"
exon 842..929
/number=9
exon 930..1016
/number=10
misc_feature join(937..1265,1269..1306,1556..1573,1573..1598)
/note="matches EST W52941 from clone IMAGE:321271"
exon 1017..1115
/number=11
exon 1116..1226
/number=12
misc_feature 1116..1226
/note="matches EST H55390 from clone C22_421"
exon 1227..1300
/number=13
exon 1301..1378
/number=14
misc_feature join(1301..1443,1440..1505)
/note="matches EST H55220 from clone C22_201"
exon 1379..1507
/number=15
exon 1508..1611
/number=16
misc_feature complement(join(1508..1535,1537..1668))
/note="matches EST AA508035 from clone IMAGE:942252"
misc_feature 1508..1800
/note="matches EST AI380836 from clone IMAGE:2108992"
misc_feature complement(1518..1611)
/note="matches EST AI743003 from clone IMAGE:2371071"
misc_feature complement(1524..2042)
/note="matches EST AW673723 from clone IMAGE:2900625"
misc_feature complement(1548..2042)
/note="matches EST AI188551 from clone IMAGE:1723268"
misc_feature complement(1551..1960)
/note="matches EST AI635875 from clone IMAGE:2289870"
misc_feature complement(1573..2019)
/note="matches EST AI825280 from clone IMAGE:2303876"
misc_feature complement(1578..2039)
/note="matches EST AA916728 from clone IMAGE:1473690"
misc_feature complement(1611..2036)
/note="matches EST AA514271 from clone IMAGE:924368"
exon 1612..2043
/number=17
misc_feature complement(1634..2042)
/note="matches EST AI284954 from clone IMAGE:1874214"
misc_feature complement(1645..2042)
/note="matches EST AA857992 from clone IMAGE:1434971"
misc_feature complement(1657..2042)
/note="matches EST AI346478 from clone IMAGE:1925967"
misc_feature complement(1676..2042)
/note="matches EST AA536082 from clone IMAGE:927690"
misc_feature complement(1685..2042)
/note="matches EST AA535608 from clone IMAGE:926900"
misc_feature complement(1692..2042)
/note="matches EST AA657736 from clone IMAGE:1207184"
misc_feature complement(1709..2042)
/note="matches EST AA658030 from clone IMAGE:1208085"
misc_feature complement(1737..2042)
/note="matches EST AW379081"
BASE COUNT 431 a 639 c 584 g 389 t
ORIGIN
1 atgaggactc tccgcaggtt gaagttcatg agttcgccca gcctcagtga cctgggcaag
61 agagagccgg ccgccgccgc ggacgagcgg ggcacgcagc agcgccgggc ctgcgccaac
121 gccacctgga acagcatcca caacggggtg atcgccgtct tccagcgcaa ggggctgccc
181 gaccaggagc tcttcagcct caacgagggc gtccggcagc tgttgaagac agagctgggg
241 tccttcttca cggagtacct gcagaaccag ctgctgacaa aaggcatggt gatccttcgg
301 gacaagattc gcttctatga gggacagaag ctgctggact cactggcaga gacctgggac
361 ttcttcttca gtgacgtgct gcccatgctg caggccatct tctacccggt gcagggcaag
421 gagccatcgg tgcgccagct ggccctgctg cacttccgga atgccatcac cctcagtgtg
481 aagctagagg atgcgctggc ccgggcccat gcccgtgtgc cccctgccat cgtgcagatg
541 ctgctggtgc tgcagggggt acatgagtcc aggggcgtga ctgaggacta cctgcgcctg
601 gagacgctgg tccagaaggt ggtgtcgcca tacctgggca cctacggcct ccactccagc
661 gaggggccct tcacccattc ctgcatcctg gagctgcaga gagacaaggc ggcggcggct
721 gctgtgctgg gtgcagtgag gaagaggccc tcggtggtgc ccatggctgg ccaggatcct
781 gcgctgagca cgagtcaccc gttctacgac gtggccagac atggcattct gcaggtggca
841 ggggatgacc gctttggaag acgtgttgtc acgttcagct gctgccggat gccaccctcc
901 cacgagctgg accaccagcg gctgctggag tacaagaaga acttgaaggc cctctacgtg
961 gtgcacccca ccagcttcat caaggtcctg tggaacatct tgaagcccct catcagtcac
1021 aagtttggga agaaagtcat ctatttcaac tacctgagtg agctccacga acaccttaaa
1081 tacgaccagc tggtcatccc tcccgaagtt ttgcggtacg atgagaagct ccagagcctg
1141 cacgagggcc ggacgccgcc tcccaccaag acaccaccgc cgcggccccc gctgcccaca
1201 cagcagtttg gcgtcagtct gcaatacctc aaagacaaaa atcaaggcga actcatcccc
1261 cctgtgctga ggttcacagt gacgtacctg agagagaaag gcctgcgcac cgagggcctg
1321 ttccggagat ccgccagcgt gcagaccgtc cgcgagatcc agaggctcta caaccaaggg
1381 aagcccgtga actttgacga ctacggggac attcacatcc ctgccgtgat cctgaagacc
1441 ttcctgcgag agctgcccca gccgcttctg accttccagg cctacgagca gattctcggg
1501 atcacctgtg tggagagcag cctgcgtgtc actggctgcc gccagatctt acggagcctc
1561 ccagagcaca actacgtcgt cctccgctac ctcatgggct tcctgcatgc ggtgtcccgg
1621 gagagcatct tcaacaaaat gaacagctct aacctggcct gtgtcttcgg gctgaatttg
1681 atctggccat cccagggggt ctcctccctg agtgcccttg tgcccctgaa catgttcact
1741 gaactgctga tcgagtacta tgaaaagatc ttcagcaccc cggaggcacc tggggagcac
1801 ggcctggcac catgggaaca ggggagcagg gcagcccctt tgcaggaggc tgtgccacgg
1861 acacaagcca cgggcctcac caagcctacc ctacctccga gtcccctgat ggcagccaga
1921 agacgtctct agtgttgcga acactctgta tatttcgagc tacctcccac acctgtctgt
1981 gcacttgtat gttttgtaaa cttggcatct gtaaaaataa ccagccatta gatgaattca
2041 gaa
//