LOCUS AL354614 3363 bp mRNA linear HUM 14-NOV-2006
DEFINITION Novel human gene mapping to chomosome 1.
ACCESSION AL354614
VERSION AL354614.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3363)
AUTHORS Rhodes S., Huckle E.
JOURNAL Submitted (27-APR-2000) to the INSDC. E-mail contact:
humquery@sanger.ac.uk
COMMENT This cDNA sequence was assembled from public domain ESTs and single
pass sequencing reads from expressed DNA templates, aligned to the
genomic DNA sequence from the bacterial clones 117P20 (AL021940)
and
97P20 (AL031297);
The EST sequences listed match this sequence with an identity
of at least 95% between the coordinates shown.
Further information can be found at
http://www.sanger.ac.uk/HGP/Chr1/
Experimentally determined gene.
Sanger Centre name : dJ117P20.C1.5
FEATURES Location/Qualifiers
source 1..3363
/db_xref="H-InvDB:HIT000250332"
/organism="Homo sapiens"
/chromosome="1"
/map="1q24"
/mol_type="mRNA"
/db_xref="taxon:9606"
exon 1..575
/number=1
exon 576..677
/number=2
exon 678..766
/number=3
CDS 701..3262
/product="hypothetical protein"
/db_xref="H-InvDB:HIT000250332.13"
/db_xref="HGNC:HGNC:25565"
/db_xref="InterPro:IPR027902"
/db_xref="UniProtKB/Swiss-Prot:Q9NSG2"
/protein_id="CAB89727.1"
/translation="MFLPHMNHLTLEQTFFSQVLPKTVKLFDDMMYELTSQARGLSSQ
NLEIQTTLRNILQTMVQLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFVH
CKNSESVYSGCLHLVSDLLQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIV
IHSLLDICSVISSMDHAFHANTWKFIIKQSLKHQSIIKSQLKHKDIITSLCEDILFSF
HSCLQLAEQMTQSDAQDNADYRLFQKTLKLCRFFANSLLHYAKEFLPFLSDSCCTLHQ
LYLQIHSKFPPSLYATRISKAHQEEIAGAFLVTLDPLISQLLTFQPFMQVVLDSKLDL
PCELQFPQCLLLVVVMDKLPSQPKEVQTLWCTDSQVSETTTRISLLKAVFYSFEQCSG
ELSLPVHLQGLKSKGKAEVAVTLYQHVCVHLCTFITSFHPSLFAELDAALLNAVLSAN
MITSLLAMDAWCFLARYGTAELCAHHVTIVAHLIKSCPGECYQLINLSILLKRLFFFM
APPHQLEFIQKFSPKEAENLPLWQHISFQALPPELREQTVHEVTTVGTAECRKWLSRS
RTLGELESLNTVLSALLAVCNSAGEALDTGKQTAIIEVVSQLWAFLNIKQVADQPYVQ
QTFSLLLPLLGFFIQTLDPKLILQAVTLQTSLLKLELPDYVRLAMLDFVSSLGKLFIP
EAIQDRILPNLSCMFALLLADRSWLLEQHTLEAFTQFAEGTNHEEIVPQCLSSEETKN
KVVSFLEKTGFVDETEAAKVERVKQEKGIFWEPFANVTVEEAKRSSLQPYAKRARQEF
PWEEEYRSALHTIAGALEATESLLQKGPAPAWLSMEMEALQERMDKLKRYIHTLG"
exon 767..871
/number=4
exon 872..1012
/number=5
exon 1013..1178
/number=6
exon 1179..1263
/number=7
exon 1264..1402
/number=8
exon 1403..1483
/number=9
exon 1484..1548
/number=10
exon 1549..1697
/number=11
exon 1698..1827
/number=12
exon 1828..2014
/number=13
exon 2015..2097
/number=14
misc_feature 2055..2281
/note="matches EST AA372264"
exon 2098..2149
/number=15
exon 2150..2239
/number=16
exon 2240..2425
/number=17
exon 2426..2548
/number=18
misc_feature 2517..3021
/note="matches EST AA045214 from clone IMAGE:376624"
exon 2549..2644
/number=19
misc_feature 2634..3091
/note="matches EST AA491378 from clone IMAGE:825821"
exon 2645..2758
/number=20
misc_feature 2694..2760
/note="matches EST W20092 from clone IMAGE:305970"
exon 2759..2863
/number=21
misc_feature 2781..3198
/note="matches EST AA255801 from clone IMAGE:682325"
misc_feature complement(2843..3360)
/note="matches EST AI677860 from clone IMAGE:2330028"
exon 2864..2944
/number=22
misc_feature complement(2871..3363)
/note="matches EST AI636820 from clone IMAGE:2232951"
/note="matches EST AI143214 from clone IMAGE:1705654"
misc_feature complement(join(2875..2911,2911..3363))
/note="matches EST AA045249 from clone IMAGE:376624"
exon 2945..3064
/number=23
misc_feature complement(2945..3363)
/note="matches EST AA505146 from clone IMAGE:825821"
misc_feature complement(2990..3363)
/note="matches EST AA978262 from clone IMAGE:1579851"
misc_feature complement(join(3012..3117,3117..3363))
/note="matches EST R42858 from clone IMAGE:31462"
misc_feature complement(3050..3363)
/note="matches EST AA844031 from clone IMAGE:1388232"
exon 3065..3363
/number=24
misc_feature complement(3065..3363)
/note="matches EST AI221282 from clone IMAGE:1842585"
misc_feature complement(3092..3362)
/note="matches EST AA535882 from clone IMAGE:927171"
misc_feature complement(3135..3363)
/note="matches EST AA256694 from clone IMAGE:682325"
misc_feature 3138..3281
/note="matches EST AI630082 from clone ad01d11"
misc_feature complement(3165..3363)
/note="matches EST AI625350 from clone IMAGE:2230748"
BASE COUNT 903 a 699 c 697 g 1064 t
ORIGIN
1 ggctttggcc ctggaaagcc tcgcggacgt gttctgaccc aaggttttag cagtggatgt
61 ggcgttttct tccattcctt ctttcagttt ttctgtactc gttgcttgca attaagtgta
121 aatacttttg ctagtggata atgggggagg caaggactga gacctgcggt atgacgatag
181 ctctggctct taatagtttg aggtaaagcg agatactctg agcttttgtc tcccgtaaaa
241 agggtggtga atatgaataa gggctttctt agcgttataa gaattaaagg gcatagttct
301 gtggtgtgaa atctttaaaa gatgttcagt aaataaaaat gattttcctc cttcccctct
361 cagacctctt tttcttcttt ctttcttttt ttttgacaag ttctcactcc tctcacccag
421 gctggagtct ttctgaaaga gttcttccgc ttgttgttgg ctttcaactg ttggatttga
481 ggcgcttagc gccttcttcg tccgggtgca gcacattctt gattggtctc atgcctttgt
541 ggttgtaaat gtgcctggaa tcctagcctt tcatggtttg ttctgagtaa tgaataccct
601 attactatga tactagtatc ttccttaatt atcctactca ttgtctcaac attctgacag
661 ttggattgag catattcaaa ttttgaaaat tattgtagaa atgtttttac ctcatatgaa
721 ccacctgaca ttggaacaga ctttcttttc acaagtgtta ccaaagactg tgaaattatt
781 cgatgacatg atgtatgaat taaccagtca agccagagga ctgtcaagcc aaaatttgga
841 aatccagacc actctaagga atattttaca aacaatggtg cagctcttag gagctctcac
901 aggatgtgtt cagcatatct gtgccacaca ggaatccatc attttggaaa atattcagag
961 tctcccctcc tcagtccttc atataattaa aagcacattt gtgcattgta agaatagtga
1021 atctgtgtat tctgggtgtt tacacctagt ttcagacctt ctccaggctc ttttcaagga
1081 ggcctattct cttcaaaagc agttaatgga actgctggac atggtttgca tggacccttt
1141 agtagatgac aatgatgata ttttgaatat ggtaatagtt attcattctt tattggatat
1201 ctgctctgtt atttccagta tggaccatgc atttcatgcc aatacttgga agtttataat
1261 taagcagagc cttaagcacc agtccataat aaaaagccag ttgaaacaca aagatataat
1321 tactagcttg tgtgaagaca ttcttttctc cttccattct tgtttacagt tagctgagca
1381 gatgacacag tcagatgcac aggataatgc tgactacaga ttatttcaga aaacactcaa
1441 attgtgtcgt ttttttgcca actccctttt gcactacgct aaggaatttc ttcctttcct
1501 ctctgattct tgctgtactt tgcaccaact gtatcttcag atacacagca agtttcctcc
1561 aagcctttat gctaccagga tttctaaagc acaccaagag gaaatagcag gtgctttcct
1621 agtgacactg gatccactta tcagtcagct gctcacattt cagcctttca tgcaggtggt
1681 tttggacagt aaattagacc tgccatgtga actgcagttt ccacaatgtc ttcttctggt
1741 tgttgtcatg gataagctgc catctcagcc taaggaagtg caaaccctgt ggtgcacaga
1801 cagccaggtc tcagaaacga caaccaggat atctctactc aaagccgttt tctacagttt
1861 tgagcagtgt tctggtgaac tctctctacc tgttcattta cagggattaa agagtaaggg
1921 gaaagctgag gtggctgtca ccttgtatca gcatgtttgt gttcatctgt gtacatttat
1981 tacttccttt catccctcac tgtttgctga actggatgct gctctgctga atgctgtact
2041 tagtgctaat atgatcacct ctttgttagc tatggatgca tggtgcttcc ttgctcgata
2101 tgggactgct gaactgtgtg cacaccatgt caccatagtg gctcatctga taaagtcatg
2161 ccctggagaa tgttatcaac tcatcaacct atcaatactg ttgaagcgtc tctttttctt
2221 catggcacca ccccatcagc tggagtttat ccagaaattt tccccaaaag aagcagaaaa
2281 tctgcctctg tggcaacata tttccttcca ggcgttacct cctgagctta gggaacaaac
2341 tgtccatgag gtcaccacag taggcactgc agaatgcagg aaatggctga gcaggagtcg
2401 tactttggga gaactagaat ctctgaacac agtactgtct gctttgcttg cagtatgtaa
2461 ttctgctggt gaagctttgg atacaggaaa acaaactgca attatcgaag ttgtgagtca
2521 gctttgggct tttttaaaca ttaaacaggt agcagatcaa ccttatgttc aacagacatt
2581 cagcctttta cttccactgt tgggattttt cattcaaact ctagatccta aactgatact
2641 tcaggcagta actttgcaga cctcgctact taaattagag cttcctgact atgttcgttt
2701 ggcaatgttg gattttgtat cttctttagg aaaacttttt atacctgaag ctatccagga
2761 cagaattctg cccaacctgt cctgtatgtt tgccttactg ctagctgaca ggagttggct
2821 gctagaacaa cataccttgg aggcgtttac tcagttcgct gagggaacaa atcatgaaga
2881 gatagttcca cagtgtctca gttctgaaga aactaagaac aaagttgtat cctttctgga
2941 gaagactggg tttgtagatg aaactgaagc tgccaaagtg gaacgtgtga aacaggaaaa
3001 aggtattttc tgggaaccct ttgctaatgt gactgtagaa gaagcaaaga ggtcatcttt
3061 acagccttat gcaaaaagag ctcgtcagga gttcccctgg gaagaagagt acaggtcagc
3121 gctgcataca atagcagggg ctttggaagc aactgagtca ctactccaaa agggtcctgc
3181 tccagcctgg ctttcaatgg aaatggaggc gctccaagaa aggatggata agctaaaacg
3241 ttacatacat actctagggt gaaacttatc actaggcaga actgggtttg atgctttgtc
3301 aactgaaaat acttatgtct gtacattttc taacagatat aaaacaaatt ttgtaaagtt
3361 gaa
//