LOCUS AL354612 4599 bp mRNA linear HUM 15-OCT-2008
DEFINITION Novel human gene mapping to chomosome 1.
ACCESSION AL354612
VERSION AL354612.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4599)
AUTHORS Rhodes S., Huckle E.
JOURNAL Submitted (27-APR-2000) to the INSDC. E-mail contact:
humquery@sanger.ac.uk
COMMENT This cDNA sequence was assembled from public domain ESTs and single
pass sequencing reads from expressed DNA templates, aligned to the
genomic DNA sequence from the bacterial clone 654H19 (AL049745).
The EST sequences listed match this sequence with an identity
of at least 95% between the coordinates shown.
Further information can be found at
http://www.sanger.ac.uk/HGP/Chr1/
Experimentally determined gene with isoform of dJ654H19.C1.1
Sanger Centre name : dJ654H19.C1.1.1
FEATURES Location/Qualifiers
source 1..4599
/db_xref="H-InvDB:HIT000250330"
/organism="Homo sapiens"
/chromosome="1"
/map="1p31.1-33"
/mol_type="mRNA"
/db_xref="taxon:9606"
exon 1..231
/number=1
misc_feature join(109..140,141..185,209..380,381..497)
/note="matches EST AA147472 from clone IMAGE:591718"
CDS 175..1803
/product="hypothetical protein"
/db_xref="GOA:Q9BTX1"
/db_xref="H-InvDB:HIT000250330.14"
/db_xref="HGNC:HGNC:25525"
/db_xref="InterPro:IPR019049"
/db_xref="UniProtKB/Swiss-Prot:Q9BTX1"
/protein_id="CAB89725.1"
/translation="MATAVSRPCAGRSRDILWRVLGWRIVASIVWSVLFLPICTTVFI
IFSRIDLFHPIQWLSDSFSDLYSSYVIFYFLLLSVVIIIISIFNVEFYAVVPSIPCSR
LALIGKIIHPQQLMHSFIHAAMGMVMAWCAAVITQGQYSFLVVPCTGTNSFGSPAAQT
CLNEYHLFFLLTGAFMGYSYSLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCV
ESLFLVRNFCILYYFLGYIPKAWISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHVWLC
GVFLLTTWYVSWILFKIYATEAHVFPVQPPFAEGSDECLPKVLNSNPPPIIKYLALQD
LMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNGMTQKLILYQEAAATNGR
VSSSYPVEPKKLNSPEETAFQTPKSSQMPRPSVPPLVKTSLFSSKLSTPDVVSPFGTP
FGSSVMNRMAGIFDVNTCYGSPQSPQLIRRGPRLWTSASDQQMTEFSNPSPSTSISAE
APRGLHSGCFFRCPNAYLGIRRSVALSSSIIYRG"
exon 232..352
/number=2
exon 353..454
/number=3
misc_feature 362..648
/note="matches EST AA490803 from clone IMAGE:824126"
exon 455..629
/number=4
exon 630..768
/number=5
exon 769..877
/number=6
misc_feature join(791..971,999..1079)
/note="matches EST AA085574 from clone IMAGE:550325"
misc_feature 826..1280
/note="matches EST AW503392 from clone IMAGE:3078513"
exon 878..929
/number=7
exon 930..1065
/number=8
misc_feature complement(997..1231)
/note="matches EST AI239866 from clone IMAGE:1846456"
exon 1066..1158
/number=9
exon 1159..1240
/number=10
misc_feature 1160..1308
/note="matches EST AA299910"
exon 1241..1396
/number=11
misc_feature 1344..1699
/note="matches EST AW500735 from clone IMAGE:3077635"
exon 1397..1642
/number=12
exon 1643..1699
/number=13
exon 1700..1763
/number=14
exon 1764..1864
/number=15
misc_feature complement(1829..2344)
/note="matches EST AW206280 from clone IMAGE:2721558"
misc_feature 1853..1997
/note="matches EST AA251270 from clone IMAGE:684041"
exon 1865..2025
/number=16
misc_feature complement(1884..2338)
/note="matches EST AI627886 from clone IMAGE:2279628"
misc_feature join(1901..2186,2183..2264)
/note="matches EST AA303599"
misc_feature complement(1933..2347)
/note="matches EST AA147473 from clone IMAGE:591718"
misc_feature complement(1970..2344)
/note="matches EST AA490611 from clone IMAGE:824126"
misc_feature complement(2014..2344)
/note="matches EST AA715039 from clone IMAGE:1269900"
exon 2026..4599
/number=17
misc_feature complement(2033..2339)
/note="matches EST AI661156 from clone IMAGE:721652"
misc_feature 2044..2322
/note="matches EST AA260874 from clone IMAGE:721652"
misc_feature complement(2047..2338)
/note="matches EST AW590447 from clone IMAGE:2947646"
/note="matches EST AW590866 from clone IMAGE:2949070"
misc_feature complement(2066..2344)
/note="matches EST AI864512 from clone IMAGE:2410389"
misc_feature join(2074..2363,2359..2500)
/note="matches EST AA204731 from clone IMAGE:645507"
misc_feature 2081..2344
/note="matches EST AA894490 from clone IMAGE:1252530"
misc_feature complement(2153..2338)
/note="matches EST AA612785 from clone IMAGE:1145113"
misc_feature complement(2281..2765)
/note="matches EST AA237035 from clone IMAGE:683945"
misc_feature 2445..2628
/note="matches EST AA149960 from clone IMAGE:566568"
misc_feature 2712..2985
/note="matches EST Z44257 from clone c-1wa10"
misc_feature join(3047..3228,3287..3315)
/note="matches EST R12986 from clone IMAGE:27569"
misc_feature 3084..3520
/note="matches EST AA448446 from clone IMAGE:784862"
misc_feature 3094..3537
/note="matches EST AI734041 from clone IMAGE:755238"
misc_feature 3109..3681
/note="matches EST AA422167 from clone IMAGE:755238"
misc_feature 3469..3757
/note="matches EST R66041 from clone IMAGE:140494"
misc_feature 3556..3737
/note="matches EST R32927 from clone IMAGE:135192"
misc_feature join(3557..3752,3746..3792)
/note="matches EST R32942 from clone IMAGE:135216"
misc_feature 3626..4132
/note="matches EST AA258773 from clone IMAGE:687095"
misc_feature complement(3630..3733)
/note="matches EST AW386142"
misc_feature 3716..3808
/note="matches EST AA262911 from clone IMAGE:686255"
misc_feature 3772..4034
/note="matches EST R53730 from clone IMAGE:138096"
misc_feature 3781..4033
/note="matches EST AA094074"
misc_feature 3897..4282
/note="matches EST N54624 from clone IMAGE:282421"
misc_feature 3928..4407
/note="matches EST AA253485 from clone IMAGE:669390"
misc_feature complement(3997..4574)
/note="matches EST AW614348 from clone IMAGE:2952516"
misc_feature complement(4045..4586)
/note="matches EST AI654838 from clone IMAGE:2309581"
misc_feature complement(4049..4287)
/note="matches EST AA779793 from clone IMAGE:1034559"
misc_feature complement(4052..4586)
/note="matches EST AW237213 from clone IMAGE:2689347"
misc_feature complement(4066..4595)
/note="matches EST AI186812 from clone IMAGE:1745441"
misc_feature complement(4070..4584)
/note="matches EST H98989 from clone IMAGE:261445"
misc_feature complement(join(4078..4101,4101..4454,4453..4588))
/note="matches EST AA947479 from clone IMAGE:1508419"
misc_feature complement(4083..4591)
/note="matches EST AI859480 from clone IMAGE:2435713"
misc_feature complement(4115..4588)
/note="matches EST AI628445 from clone IMAGE:2284779"
misc_feature complement(4118..4574)
/note="matches EST AW270990 from clone IMAGE:2768944"
misc_feature complement(4126..4575)
/note="matches EST AA778165 from clone IMAGE:379878"
misc_feature complement(4129..4581)
/note="matches EST AI650728 from clone IMAGE:2298508"
misc_feature 4143..4574
/note="matches EST AA481351 from clone IMAGE:756484"
misc_feature complement(4153..4599)
/note="matches EST AA903407 from clone IMAGE:1518529"
misc_feature complement(4157..4598)
/note="matches EST AI688930 from clone IMAGE:2269984"
misc_feature complement(4180..4599)
/note="matches EST AA257971 from clone IMAGE:687095"
misc_feature complement(4214..4599)
/note="matches EST AA687117 from clone IMAGE:1234444"
misc_feature complement(4229..4596)
/note="matches EST AI281547 from clone IMAGE:1968408"
misc_feature complement(4241..4599)
/note="matches EST AI244536 from clone IMAGE:1868951"
misc_feature complement(4429..4585)
/note="matches EST N52010 from clone IMAGE:282421"
BASE COUNT 1267 a 886 c 943 g 1503 t
ORIGIN
1 gagcttgtcc agacgaagcc tcgcagggat gggttggagc ctgggccggg cttcgctcag
61 gcagcgtttg aggcagaccc agcagggtcc tcctggggcc ttcctgcctt tgaactgcgg
121 tggcgggcgg gcgcacggtc tcctgtacgc cctagactag gggccgccat ctccatggcc
181 acggccgtga gccggccctg cgccggcagg tcgcgggaca tactgtggcg cgttttgggc
241 tggaggatag ttgcaagtat tgtttggtca gtgctatttc tacccatctg caccacagta
301 tttataattt tcagcaggat tgatttgttt catcctatac agtggctgtc tgattctttc
361 agtgacctgt atagttccta tgtaatcttt tacttcctgc tgctgtcagt ggtaataata
421 ataataagta ttttcaatgt ggagttctat gcagttgtgc cttctattcc ttgctccaga
481 ctagctctga tagggaagat cattcatcct cagcaactca tgcactcatt tattcatgct
541 gcaatgggaa tggtgatggc ctggtgtgct gcagtgataa cccagggcca gtacagcttt
601 cttgtggttc cctgcactgg tactaacagc tttggtagcc ctgctgcgca aacctgctta
661 aatgaatatc atcttttttt cctactgact ggagcattta tgggctatag ctatagcctc
721 ctgtattttg ttaacaacat gaactatctt ccatttccca tcatacagca atacaagttc
781 ttgcgtttta ggagatctct gctcttatta gttaaacaca gttgtgtgga atcactgttc
841 ctggttagaa atttctgcat tttatattat tttcttggct atattcccaa agcttggatt
901 agcactgcta tgaaccttca catagatgag caggttcata ggccacttga cacagtgagt
961 ggcctcttaa atctctcgtt actctaccat gtctggctgt gtggtgtctt tctcctgacg
1021 acttggtatg tctcatggat actcttcaaa atctatgcca cagaggctca tgtgtttcct
1081 gttcaaccac catttgcaga agggtcagat gagtgccttc caaaagtgtt aaatagcaat
1141 cctcccccca tcataaagta tttagccttg caggacctga tgttgctttc tcaatattct
1201 ccttcacgaa gacaagaagt tttcagcctc agccaaccag gtggacatcc ccacaattgg
1261 acagccattt caagggagtg tttgaatctt ttaaatggta tgactcagaa actgattctc
1321 tatcaagaag ctgctgctac gaatgggaga gtgtcttcat cttacccagt ggaacctaag
1381 aaattaaatt ctccagaaga aactgctttt cagacaccaa aatctagcca gatgcctcgg
1441 ccttcagtgc caccattagt taaaacatca ctgttttctt caaaattatc tacacctgat
1501 gttgtgagcc catttgggac cccatttggc tctagtgtaa tgaatcggat ggctggaatt
1561 tttgatgtaa acacctgcta tgggtcaccg caaagtcctc agctaataag aagggggcca
1621 agattgtgga catcagcttc tgatcagcaa atgactgaat tttctaatcc ttctccatct
1681 acctctatta gtgctgaggc acccagaggc ctccattcag gctgtttttt cagatgccca
1741 aatgcatatt tgggcattag aaggtctgtc gcacttagta gcagcatcat ttacagagga
1801 tagatttgga gttgtccaga cgacactacc agctatcctt aatactttgt tgacactgca
1861 agaggcagtc gacaagtact ttaagcttcc tcatgcttcc agtaaaccac cccggatttc
1921 aggaagcctt gtggacactt catataaaac attaagattt gcattcagag catcactgaa
1981 aactgccatc tatcgaataa ctactacatt tggtgaacat ctgaatgctg tgcaagcatc
2041 tgcagaacat cagaaaagac ttcaacagtt cttggagttc aaagaatagt taagtaatat
2101 aaactgtgtt cattacactg ctgatacaac tacagatggg acagtaaatg ttcagcattc
2161 ttggatcaga agaaaacgga ctaattagat gcttcctttg tcgtggtggt tgctttgaaa
2221 actatacttt aatgggagaa atcatggaaa gaaattctca acagaataac tgaaaactgc
2281 cttttctgta ccgattgctt tttgtgtgtg tggtataata aaatctttat tcaattttac
2341 agaagcattg atggcagtcg aaatgtctct agctcatata acttaatagt aataactaaa
2401 aaacttttag aatttacttt tgaaaggagg gaagccagtt ctgaaatgag tataggttga
2461 tttcatagtc ttcttaatta agagtttagc tctttgtaaa ctcaaaatac ataaactttt
2521 taagtgtagt ttcatttact gaaggataaa aatggtaaca gtgcagcaat attcacaaaa
2581 aatattgtct aacggacata ttttgttaat ctgttaggtt gggtttttgt ttccagggac
2641 aaattaaatt tgtatgatta cccaaaaaag ggtctcagtt tacagatgct aactctatat
2701 aaaggaatgt ggaaaaactc agttcttaag ttacaagatt aaaaattcac atttggtctt
2761 taagaaacaa ttgactgaca tctatgaatt tattttgtat catgctagta aacacgaagt
2821 attaatgtat gggtattttc ccagctagtt ttgctttctt tttctggagc aaaacattaa
2881 gtgattgcag agtttttcaa gcaagagaaa aaggtttgca aaaaaaccca ggaaatgttc
2941 ccttttttcc ccaccattca tcttcattag atcaaattct gtgaaacttg tctggtctct
3001 caaagggagc agcctctgta gtgttaaatg gctaattaaa ataggaagat ctttatagcc
3061 agaaacaact tagtcatcaa atagcaagtg aaaccaaaac gtcagaggga ttactgtact
3121 tggaagtatg ttgtgtgtcc caaatgtgaa cgaagtattg ttagaattta ttagatcagc
3181 ttctttggag atcaaagatt ggaaatccta gtcatagata ttcactggac tggctttgga
3241 ctgaaatgct cctttgtaat tcttttccta ttgtcttttc cttctagtgt cccaaaatat
3301 tttctttaaa gtcagcacag tactgtatat gaatctttaa tgtggtatca tatatgtcta
3361 cttttgtctg attcatcgat gtattatatc tttataattg aatattttag ctccgggtcc
3421 tgttgcccct tcaagcagta catgccaaat tataaatagg tgctactggc cttgagcata
3481 tcactgtggg acagttcccc aattgtcaag tgtttagata tgtagactat tgccatttgt
3541 ttttttgttt tggttttgct ttgtgtctga agctgaattg atttcttttt tttgaatgtg
3601 aaagttgaat ttcaaacgta gtcatttctt acagatggcc aagacagaaa attgtggcta
3661 ggttgactga gaactgttgt cttccatgta ttaacacaat taagcttttt atattccact
3721 ctctgtgctg accctggctg aggcattttg ggagacaagg actctgaatc ttctgcttcc
3781 attaaagaag aactgtgata ttcaacattg gatttctgag aataaagata ggatgattcc
3841 tttgaacttt gacttacttg tataaaatgt ccagctaggt taggtttttg ccatttccta
3901 tatactttgg gtaaagctac atttgatgag caatgtgaat gtttctgaga atgttcattc
3961 ctgttttctc ttaagagaat gtgctgtgta ctaaatacag gccacatagt gtctgcctgt
4021 tgaagatctg gaaactgcct ccccagatct gtattgtatt tggtaggtaa gggggtcagt
4081 ttctttttct cattgtgtgt tgataatcta cacaccatct gttggaacca gggtgttatt
4141 atggggaact cctcctgtgt actaggagga ggaccttagg gagaccaaga ggagagaagc
4201 atttcctttg atgaagtcac atcctgtcta tgagcccact aatgctgtaa cattggcctg
4261 aaagagagtg ttctttaaaa gcctttctcg gctgttagta taaaaacatg atggtatcag
4321 ctcttagcat gtttgcttga cccttatgga aggtataaat ccacagaact tccttcccag
4381 agaactggga aattgtccta gaaataaacc ttgtacagtt gagtggacat ggataagcaa
4441 caatttgtta ctttgcagga tttgttcctt ggtaattgtt tggtgtgtca tcctgtaaat
4501 attcatgata gtctgtttat atccttttgt atatcgttga tactggattg ggtagaaaaa
4561 taaattggca atttaaaaaa atggaacagt taattgaaa
//