LOCUS AL354612 4599 bp mRNA linear HUM 15-OCT-2008 DEFINITION Novel human gene mapping to chomosome 1. ACCESSION AL354612 VERSION AL354612.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4599) AUTHORS Rhodes S., Huckle E. JOURNAL Submitted (27-APR-2000) to the INSDC. E-mail contact: humquery@sanger.ac.uk COMMENT This cDNA sequence was assembled from public domain ESTs and single pass sequencing reads from expressed DNA templates, aligned to the genomic DNA sequence from the bacterial clone 654H19 (AL049745). The EST sequences listed match this sequence with an identity of at least 95% between the coordinates shown. Further information can be found at http://www.sanger.ac.uk/HGP/Chr1/ Experimentally determined gene with isoform of dJ654H19.C1.1 Sanger Centre name : dJ654H19.C1.1.1 FEATURES Location/Qualifiers source 1..4599 /db_xref="H-InvDB:HIT000250330" /organism="Homo sapiens" /chromosome="1" /map="1p31.1-33" /mol_type="mRNA" /db_xref="taxon:9606" exon 1..231 /number=1 misc_feature join(109..140,141..185,209..380,381..497) /note="matches EST AA147472 from clone IMAGE:591718" CDS 175..1803 /product="hypothetical protein" /db_xref="GOA:Q9BTX1" /db_xref="H-InvDB:HIT000250330.14" /db_xref="HGNC:HGNC:25525" /db_xref="InterPro:IPR019049" /db_xref="UniProtKB/Swiss-Prot:Q9BTX1" /protein_id="CAB89725.1" /translation="MATAVSRPCAGRSRDILWRVLGWRIVASIVWSVLFLPICTTVFI IFSRIDLFHPIQWLSDSFSDLYSSYVIFYFLLLSVVIIIISIFNVEFYAVVPSIPCSR LALIGKIIHPQQLMHSFIHAAMGMVMAWCAAVITQGQYSFLVVPCTGTNSFGSPAAQT CLNEYHLFFLLTGAFMGYSYSLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCV ESLFLVRNFCILYYFLGYIPKAWISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHVWLC GVFLLTTWYVSWILFKIYATEAHVFPVQPPFAEGSDECLPKVLNSNPPPIIKYLALQD LMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNGMTQKLILYQEAAATNGR VSSSYPVEPKKLNSPEETAFQTPKSSQMPRPSVPPLVKTSLFSSKLSTPDVVSPFGTP FGSSVMNRMAGIFDVNTCYGSPQSPQLIRRGPRLWTSASDQQMTEFSNPSPSTSISAE APRGLHSGCFFRCPNAYLGIRRSVALSSSIIYRG" exon 232..352 /number=2 exon 353..454 /number=3 misc_feature 362..648 /note="matches EST AA490803 from clone IMAGE:824126" exon 455..629 /number=4 exon 630..768 /number=5 exon 769..877 /number=6 misc_feature join(791..971,999..1079) /note="matches EST AA085574 from clone IMAGE:550325" misc_feature 826..1280 /note="matches EST AW503392 from clone IMAGE:3078513" exon 878..929 /number=7 exon 930..1065 /number=8 misc_feature complement(997..1231) /note="matches EST AI239866 from clone IMAGE:1846456" exon 1066..1158 /number=9 exon 1159..1240 /number=10 misc_feature 1160..1308 /note="matches EST AA299910" exon 1241..1396 /number=11 misc_feature 1344..1699 /note="matches EST AW500735 from clone IMAGE:3077635" exon 1397..1642 /number=12 exon 1643..1699 /number=13 exon 1700..1763 /number=14 exon 1764..1864 /number=15 misc_feature complement(1829..2344) /note="matches EST AW206280 from clone IMAGE:2721558" misc_feature 1853..1997 /note="matches EST AA251270 from clone IMAGE:684041" exon 1865..2025 /number=16 misc_feature complement(1884..2338) /note="matches EST AI627886 from clone IMAGE:2279628" misc_feature join(1901..2186,2183..2264) /note="matches EST AA303599" misc_feature complement(1933..2347) /note="matches EST AA147473 from clone IMAGE:591718" misc_feature complement(1970..2344) /note="matches EST AA490611 from clone IMAGE:824126" misc_feature complement(2014..2344) /note="matches EST AA715039 from clone IMAGE:1269900" exon 2026..4599 /number=17 misc_feature complement(2033..2339) /note="matches EST AI661156 from clone IMAGE:721652" misc_feature 2044..2322 /note="matches EST AA260874 from clone IMAGE:721652" misc_feature complement(2047..2338) /note="matches EST AW590447 from clone IMAGE:2947646" /note="matches EST AW590866 from clone IMAGE:2949070" misc_feature complement(2066..2344) /note="matches EST AI864512 from clone IMAGE:2410389" misc_feature join(2074..2363,2359..2500) /note="matches EST AA204731 from clone IMAGE:645507" misc_feature 2081..2344 /note="matches EST AA894490 from clone IMAGE:1252530" misc_feature complement(2153..2338) /note="matches EST AA612785 from clone IMAGE:1145113" misc_feature complement(2281..2765) /note="matches EST AA237035 from clone IMAGE:683945" misc_feature 2445..2628 /note="matches EST AA149960 from clone IMAGE:566568" misc_feature 2712..2985 /note="matches EST Z44257 from clone c-1wa10" misc_feature join(3047..3228,3287..3315) /note="matches EST R12986 from clone IMAGE:27569" misc_feature 3084..3520 /note="matches EST AA448446 from clone IMAGE:784862" misc_feature 3094..3537 /note="matches EST AI734041 from clone IMAGE:755238" misc_feature 3109..3681 /note="matches EST AA422167 from clone IMAGE:755238" misc_feature 3469..3757 /note="matches EST R66041 from clone IMAGE:140494" misc_feature 3556..3737 /note="matches EST R32927 from clone IMAGE:135192" misc_feature join(3557..3752,3746..3792) /note="matches EST R32942 from clone IMAGE:135216" misc_feature 3626..4132 /note="matches EST AA258773 from clone IMAGE:687095" misc_feature complement(3630..3733) /note="matches EST AW386142" misc_feature 3716..3808 /note="matches EST AA262911 from clone IMAGE:686255" misc_feature 3772..4034 /note="matches EST R53730 from clone IMAGE:138096" misc_feature 3781..4033 /note="matches EST AA094074" misc_feature 3897..4282 /note="matches EST N54624 from clone IMAGE:282421" misc_feature 3928..4407 /note="matches EST AA253485 from clone IMAGE:669390" misc_feature complement(3997..4574) /note="matches EST AW614348 from clone IMAGE:2952516" misc_feature complement(4045..4586) /note="matches EST AI654838 from clone IMAGE:2309581" misc_feature complement(4049..4287) /note="matches EST AA779793 from clone IMAGE:1034559" misc_feature complement(4052..4586) /note="matches EST AW237213 from clone IMAGE:2689347" misc_feature complement(4066..4595) /note="matches EST AI186812 from clone IMAGE:1745441" misc_feature complement(4070..4584) /note="matches EST H98989 from clone IMAGE:261445" misc_feature complement(join(4078..4101,4101..4454,4453..4588)) /note="matches EST AA947479 from clone IMAGE:1508419" misc_feature complement(4083..4591) /note="matches EST AI859480 from clone IMAGE:2435713" misc_feature complement(4115..4588) /note="matches EST AI628445 from clone IMAGE:2284779" misc_feature complement(4118..4574) /note="matches EST AW270990 from clone IMAGE:2768944" misc_feature complement(4126..4575) /note="matches EST AA778165 from clone IMAGE:379878" misc_feature complement(4129..4581) /note="matches EST AI650728 from clone IMAGE:2298508" misc_feature 4143..4574 /note="matches EST AA481351 from clone IMAGE:756484" misc_feature complement(4153..4599) /note="matches EST AA903407 from clone IMAGE:1518529" misc_feature complement(4157..4598) /note="matches EST AI688930 from clone IMAGE:2269984" misc_feature complement(4180..4599) /note="matches EST AA257971 from clone IMAGE:687095" misc_feature complement(4214..4599) /note="matches EST AA687117 from clone IMAGE:1234444" misc_feature complement(4229..4596) /note="matches EST AI281547 from clone IMAGE:1968408" misc_feature complement(4241..4599) /note="matches EST AI244536 from clone IMAGE:1868951" misc_feature complement(4429..4585) /note="matches EST N52010 from clone IMAGE:282421" BASE COUNT 1267 a 886 c 943 g 1503 t ORIGIN 1 gagcttgtcc agacgaagcc tcgcagggat gggttggagc ctgggccggg cttcgctcag 61 gcagcgtttg aggcagaccc agcagggtcc tcctggggcc ttcctgcctt tgaactgcgg 121 tggcgggcgg gcgcacggtc tcctgtacgc cctagactag gggccgccat ctccatggcc 181 acggccgtga gccggccctg cgccggcagg tcgcgggaca tactgtggcg cgttttgggc 241 tggaggatag ttgcaagtat tgtttggtca gtgctatttc tacccatctg caccacagta 301 tttataattt tcagcaggat tgatttgttt catcctatac agtggctgtc tgattctttc 361 agtgacctgt atagttccta tgtaatcttt tacttcctgc tgctgtcagt ggtaataata 421 ataataagta ttttcaatgt ggagttctat gcagttgtgc cttctattcc ttgctccaga 481 ctagctctga tagggaagat cattcatcct cagcaactca tgcactcatt tattcatgct 541 gcaatgggaa tggtgatggc ctggtgtgct gcagtgataa cccagggcca gtacagcttt 601 cttgtggttc cctgcactgg tactaacagc tttggtagcc ctgctgcgca aacctgctta 661 aatgaatatc atcttttttt cctactgact ggagcattta tgggctatag ctatagcctc 721 ctgtattttg ttaacaacat gaactatctt ccatttccca tcatacagca atacaagttc 781 ttgcgtttta ggagatctct gctcttatta gttaaacaca gttgtgtgga atcactgttc 841 ctggttagaa atttctgcat tttatattat tttcttggct atattcccaa agcttggatt 901 agcactgcta tgaaccttca catagatgag caggttcata ggccacttga cacagtgagt 961 ggcctcttaa atctctcgtt actctaccat gtctggctgt gtggtgtctt tctcctgacg 1021 acttggtatg tctcatggat actcttcaaa atctatgcca cagaggctca tgtgtttcct 1081 gttcaaccac catttgcaga agggtcagat gagtgccttc caaaagtgtt aaatagcaat 1141 cctcccccca tcataaagta tttagccttg caggacctga tgttgctttc tcaatattct 1201 ccttcacgaa gacaagaagt tttcagcctc agccaaccag gtggacatcc ccacaattgg 1261 acagccattt caagggagtg tttgaatctt ttaaatggta tgactcagaa actgattctc 1321 tatcaagaag ctgctgctac gaatgggaga gtgtcttcat cttacccagt ggaacctaag 1381 aaattaaatt ctccagaaga aactgctttt cagacaccaa aatctagcca gatgcctcgg 1441 ccttcagtgc caccattagt taaaacatca ctgttttctt caaaattatc tacacctgat 1501 gttgtgagcc catttgggac cccatttggc tctagtgtaa tgaatcggat ggctggaatt 1561 tttgatgtaa acacctgcta tgggtcaccg caaagtcctc agctaataag aagggggcca 1621 agattgtgga catcagcttc tgatcagcaa atgactgaat tttctaatcc ttctccatct 1681 acctctatta gtgctgaggc acccagaggc ctccattcag gctgtttttt cagatgccca 1741 aatgcatatt tgggcattag aaggtctgtc gcacttagta gcagcatcat ttacagagga 1801 tagatttgga gttgtccaga cgacactacc agctatcctt aatactttgt tgacactgca 1861 agaggcagtc gacaagtact ttaagcttcc tcatgcttcc agtaaaccac cccggatttc 1921 aggaagcctt gtggacactt catataaaac attaagattt gcattcagag catcactgaa 1981 aactgccatc tatcgaataa ctactacatt tggtgaacat ctgaatgctg tgcaagcatc 2041 tgcagaacat cagaaaagac ttcaacagtt cttggagttc aaagaatagt taagtaatat 2101 aaactgtgtt cattacactg ctgatacaac tacagatggg acagtaaatg ttcagcattc 2161 ttggatcaga agaaaacgga ctaattagat gcttcctttg tcgtggtggt tgctttgaaa 2221 actatacttt aatgggagaa atcatggaaa gaaattctca acagaataac tgaaaactgc 2281 cttttctgta ccgattgctt tttgtgtgtg tggtataata aaatctttat tcaattttac 2341 agaagcattg atggcagtcg aaatgtctct agctcatata acttaatagt aataactaaa 2401 aaacttttag aatttacttt tgaaaggagg gaagccagtt ctgaaatgag tataggttga 2461 tttcatagtc ttcttaatta agagtttagc tctttgtaaa ctcaaaatac ataaactttt 2521 taagtgtagt ttcatttact gaaggataaa aatggtaaca gtgcagcaat attcacaaaa 2581 aatattgtct aacggacata ttttgttaat ctgttaggtt gggtttttgt ttccagggac 2641 aaattaaatt tgtatgatta cccaaaaaag ggtctcagtt tacagatgct aactctatat 2701 aaaggaatgt ggaaaaactc agttcttaag ttacaagatt aaaaattcac atttggtctt 2761 taagaaacaa ttgactgaca tctatgaatt tattttgtat catgctagta aacacgaagt 2821 attaatgtat gggtattttc ccagctagtt ttgctttctt tttctggagc aaaacattaa 2881 gtgattgcag agtttttcaa gcaagagaaa aaggtttgca aaaaaaccca ggaaatgttc 2941 ccttttttcc ccaccattca tcttcattag atcaaattct gtgaaacttg tctggtctct 3001 caaagggagc agcctctgta gtgttaaatg gctaattaaa ataggaagat ctttatagcc 3061 agaaacaact tagtcatcaa atagcaagtg aaaccaaaac gtcagaggga ttactgtact 3121 tggaagtatg ttgtgtgtcc caaatgtgaa cgaagtattg ttagaattta ttagatcagc 3181 ttctttggag atcaaagatt ggaaatccta gtcatagata ttcactggac tggctttgga 3241 ctgaaatgct cctttgtaat tcttttccta ttgtcttttc cttctagtgt cccaaaatat 3301 tttctttaaa gtcagcacag tactgtatat gaatctttaa tgtggtatca tatatgtcta 3361 cttttgtctg attcatcgat gtattatatc tttataattg aatattttag ctccgggtcc 3421 tgttgcccct tcaagcagta catgccaaat tataaatagg tgctactggc cttgagcata 3481 tcactgtggg acagttcccc aattgtcaag tgtttagata tgtagactat tgccatttgt 3541 ttttttgttt tggttttgct ttgtgtctga agctgaattg atttcttttt tttgaatgtg 3601 aaagttgaat ttcaaacgta gtcatttctt acagatggcc aagacagaaa attgtggcta 3661 ggttgactga gaactgttgt cttccatgta ttaacacaat taagcttttt atattccact 3721 ctctgtgctg accctggctg aggcattttg ggagacaagg actctgaatc ttctgcttcc 3781 attaaagaag aactgtgata ttcaacattg gatttctgag aataaagata ggatgattcc 3841 tttgaacttt gacttacttg tataaaatgt ccagctaggt taggtttttg ccatttccta 3901 tatactttgg gtaaagctac atttgatgag caatgtgaat gtttctgaga atgttcattc 3961 ctgttttctc ttaagagaat gtgctgtgta ctaaatacag gccacatagt gtctgcctgt 4021 tgaagatctg gaaactgcct ccccagatct gtattgtatt tggtaggtaa gggggtcagt 4081 ttctttttct cattgtgtgt tgataatcta cacaccatct gttggaacca gggtgttatt 4141 atggggaact cctcctgtgt actaggagga ggaccttagg gagaccaaga ggagagaagc 4201 atttcctttg atgaagtcac atcctgtcta tgagcccact aatgctgtaa cattggcctg 4261 aaagagagtg ttctttaaaa gcctttctcg gctgttagta taaaaacatg atggtatcag 4321 ctcttagcat gtttgcttga cccttatgga aggtataaat ccacagaact tccttcccag 4381 agaactggga aattgtccta gaaataaacc ttgtacagtt gagtggacat ggataagcaa 4441 caatttgtta ctttgcagga tttgttcctt ggtaattgtt tggtgtgtca tcctgtaaat 4501 attcatgata gtctgtttat atccttttgt atatcgttga tactggattg ggtagaaaaa 4561 taaattggca atttaaaaaa atggaacagt taattgaaa //