LOCUS AL138578 2805 bp mRNA linear HUM 15-OCT-2008
DEFINITION Novel human gene mapping to chomosome 22.
ACCESSION AL138578
VERSION AL138578.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2805)
AUTHORS Collins J., Goward M.E., Huckle E.J.
JOURNAL Submitted (31-OCT-2001) to the INSDC. E-mail contact:
humquery@sanger.ac.uk
COMMENT This cDNA sequence was assembled from public domain ESTs and single
pass sequencing reads from expressed DNA templates, aligned to the
genomic DNA sequence from the bacterial clone 549K18 (AL023654).
The EST sequences listed match this sequence with an identity
of at least 95% between the coordinates shown.
Further information can be found at
http://www.sanger.ac.uk/HGP/Chr22/
Sanger Centre name : dJ549K18.C22.1
FEATURES Location/Qualifiers
source 1..2805
/db_xref="H-InvDB:HIT000250315"
/organism="Homo sapiens"
/chromosome="22"
/mol_type="mRNA"
/db_xref="taxon:9606"
exon 1..360
/number=1
CDS 174..1619
/product="hypothetical protein"
/db_xref="GOA:Q9NST1"
/db_xref="H-InvDB:HIT000250315.15"
/db_xref="HGNC:HGNC:18590"
/db_xref="InterPro:IPR002641"
/db_xref="InterPro:IPR016035"
/db_xref="InterPro:IPR033562"
/db_xref="InterPro:IPR039185"
/db_xref="UniProtKB/Swiss-Prot:Q9NST1"
/protein_id="CAB71238.2"
/translation="MYDAERGWSLSFAGCGFLGFYHVGATRCLSEHAPHLLRDARMLF
GASAGALHCVGVLSGIPLEQTLQVLSDLVRKARSRNIGIFHPSFNLSKFLRQGLCKCL
PANVHQLISGKIGISLTRVSDGENVLVSDFRSKDEVVDALVCSCFIPFYSGLIPPSFR
GVRYVDGGVSDNVPFIDAKTTITVSPFYGEYDICPKVKSTNFLHVDITKLSLRLCTGN
LYLLSRAFVPPDLKVLGEICLRGYLDAFRFLEEKGICNRPQPGLKSSSEGMDPEVAMP
SWANMSLDSSPESAALAVRLEGDELLDHLRLSILPWDESILDTLSPRLATALSEEMKD
KGGYMSKICNLLPIRIMSYVMLPCTLPVESAIAIVQRLVTWLPDMPDDVLWLQWVTSQ
VFTRVLMCLLPASRSQMPVSSQQASPCTPEQDWPCWTPCSPKGCPAETKAEATPRSIL
RSSLNFFLGNKVPAGAEGLSTFPSFSLEKSL"
exon 361..593
/number=2
exon 594..659
/number=3
exon 660..869
/number=4
misc_feature 679..895
/note="matches EST T81609 from clone IMAGE:109748"
misc_feature complement(789..1171)
/note="matches EST AI623320 from clone IMAGE:2237571"
exon 870..930
/number=5
misc_feature complement(930..1152)
/note="matches EST BF325951"
exon 931..1152
/number=6
misc_feature complement(1094..1572)
/note="matches EST AW771336 from clone IMAGE:3032421"
misc_feature complement(1113..1573)
/note="matches EST AW300718 from clone IMAGE:2665782"
exon 1153..1285
/number=7
misc_feature complement(1268..1604)
/note="matches EST AI262313 from clone IMAGE:1870841"
exon 1286..1390
/number=8
exon 1391..2805
/number=9
misc_feature complement(join(2251..2340,2341..2596))
/note="matches EST AW516390 from clone IMAGE:2791510"
BASE COUNT 640 a 753 c 763 g 649 t
ORIGIN
1 atggtccgag gggggcgggg ctgacgtcgc gctgggaatg ccctggccga gacactgagg
61 cagggtagag agcgcttgcg ggcgccgggc ggagctgctg cggatcagga cccgagccga
121 ttcccgatcc cgacccagat cctaacccgc gcccccgccc cgccgccgcc gccatgtacg
181 acgcagagcg cggctggagc ttgtccttcg cgggctgcgg cttcctgggc ttctaccacg
241 tcggggcgac ccgctgcctg agcgagcacg ccccgcacct cctccgcgac gcgcgcatgt
301 tgttcggcgc ttcggccggg gcgttgcact gcgtcggcgt cctctccggt atcccgctgg
361 agcagactct gcaggtcctc tcagatcttg tgcggaaggc caggagtcgg aacattggca
421 tcttccatcc atccttcaac ttaagcaagt tcctccgaca gggtctctgc aaatgcctcc
481 cggccaatgt ccaccagctc atctccggca aaataggcat ctctcttacc agagtgtctg
541 atggggaaaa cgttctggtg tctgactttc ggtccaaaga cgaagtcgtg gatgccttgg
601 tatgttcctg cttcatcccc ttctacagtg gccttatccc tccttccttc agaggcgtgc
661 gatatgtgga tggaggagtg agtgacaacg tacccttcat tgatgccaaa acaaccatca
721 ccgtgtcccc cttctatggg gagtacgaca tctgccctaa agtcaagtcc acgaactttc
781 ttcatgtgga catcaccaag ctcagtctac gcctctgcac agggaacctc taccttctct
841 cgagagcttt tgtccccccg gatctcaagg tgctgggaga gatatgcctt cgaggatatt
901 tggatgcatt caggttcttg gaagagaagg gcatctgcaa caggccccag ccaggcctga
961 agtcatcctc agaagggatg gatcctgagg tcgccatgcc cagctgggca aacatgagtc
1021 tggattcttc cccggagtcg gctgccttgg ctgtgaggct ggagggagat gagctgctag
1081 accacctgcg tctcagcatc ctgccctggg atgagagcat cctggacacc ctctcgccca
1141 ggctcgctac agcactgagt gaagaaatga aagacaaagg tggatacatg agcaagattt
1201 gcaacttgct acccattagg ataatgtctt atgtaatgct gccctgtacc ctgcctgtgg
1261 aatctgccat tgcgattgtc cagagactgg tgacatggct tccagatatg cccgacgatg
1321 tcctgtggtt gcagtgggtg acctcacagg tgttcactcg agtgctgatg tgtctgctcc
1381 ccgcctccag gtcccaaatg ccagtgagca gccaacaggc ctccccatgc acacctgagc
1441 aggactggcc ctgctggact ccctgctccc ccaagggctg tccagcagag accaaagcag
1501 aggccacccc gcggtccatc ctcaggtcca gcctgaactt cttcttgggc aataaagtac
1561 ctgctggtgc tgaggggctc tccacctttc ccagtttttc actagagaag agtctgtgag
1621 tcacttgagg aggcgagtct agcagattct ttcagaggtg ctaaagtttc ccatctttgt
1681 gcagctacct ccgcattgct gtgtagtgac ccctgcctgt gacgtggagg atcccagcct
1741 ctgagctgag ttggttttat gaaaagctag gaagcaacct ttcgcctgtg cagcggtcca
1801 gcacttaact ctaatacatc agcatgcgtt aattcagctg gttgggaaat gacaccagga
1861 agcccagtgc agagggtccc ttactgactg tttcgtggcc ctattaatgg tcagactgtt
1921 ccagcatgag gttcttagaa tgacaggtgt ttggatgggt gggggccttg tgatgggggg
1981 taggctggcc catgtgtgat cttgtggggt ggagggaaga gaatagcatg atcccacttc
2041 cccatgctgt gggaaggggt gcagttcgtc cccaagaacg acactgcctg tcaggtggtc
2101 tgcaaagatg ataaccttga ctactaaaaa cgtctccatg gcgggggtaa caagatgata
2161 atctacttaa ttttagaaca cctttttcac ctaactaaaa taatgtttaa agagttttgt
2221 ataaaaatgt aaggaagcgt tgttacctgt tgaattttgt attatgtgaa tcagtgagat
2281 gttagtagaa taagccttaa aaaaaaaaaa atcggttggg tgcagtggca cacggctgta
2341 atcccagcac tttgggaggc caaggttggc agatcacctg aggtcaggag ttcaagacca
2401 gtctggccaa catagcaaaa ccctgtctct actaaaaata caaaaattat ctgggcatgg
2461 tggtgcatgc ctgtaatccc agctattcgg aaggctgagg caggagaatc acttgaaccc
2521 aggaggcgga ggttgcggtg agctgagatt gcaccatttc attccagcct gggcaacatg
2581 agtgaaagtc tgactcaaaa aaaaaaaatt taaaaaacaa aataatctag tgtgcagggc
2641 attcacctca gccccccagg caggagccaa gcacagcagg agcttccgcc tcctctccac
2701 tggagcacac aacttgaacc tggcttattt tctgcaggga ccagccccac atggtcagtg
2761 agtttctccc catgtgtggc gatgagagag tgtagaaata aagac
//