LOCUS AL137703 4069 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp564P1772 (from clone DKFZp564P1772).
ACCESSION AL137703
VERSION AL137703.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4069)
AUTHORS Blum H., Bauersachs S., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (20-JAN-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by LMU (Ludwig Maximilians University, Munich/Germany)
within
the cDNA sequencing consortium of the German Genome Project.
This clone (DKFZp564P1772) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp564P1772
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4069
/db_xref="H-InvDB:HIT000025991"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="564 (synonym: hfbr2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp564P1772"
/tissue_type="brain"
/note="protein kinase C binding protein 1, alternative
start, C-terminus truncated, differentially spliced"
/db_xref="taxon:9606"
CDS join(35..1165,1165..2838)
/codon_start=1
/gene="DKFZp564P1772"
/product="hypothetical protein"
/db_xref="GOA:Q5JV90"
/db_xref="H-InvDB:HIT000025991.16"
/db_xref="InterPro:IPR000313"
/db_xref="InterPro:IPR001487"
/db_xref="InterPro:IPR001965"
/db_xref="InterPro:IPR011011"
/db_xref="InterPro:IPR013083"
/db_xref="InterPro:IPR019786"
/db_xref="InterPro:IPR019787"
/db_xref="InterPro:IPR021931"
/db_xref="InterPro:IPR035505"
/db_xref="InterPro:IPR036427"
/db_xref="InterPro:IPR037967"
/db_xref="UniProtKB/TrEMBL:Q5JV90"
/protein_id="CAI46211.1"
/translation="MSAVGEPLFSFEQERLGPLSSRTFSVADPGSAERTAQKRKFPSP
PHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLCCELCPR
VYHAKCLRLTSEPEGDWFCPECEKITVAGCIETQSKAMTMLTIEQSSYLLKFAIQKMK
QPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNC
IIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVW
AKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFN
SAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVK
LNFDMTSSPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATS
SHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGS
ILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLG
INEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPS
AVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKD
KLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKT
PPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRP
LLPKETAPAVQRVVWNSSSKFQTSSQKWHMQKMQRQQQQQQQQNQQQQPQSSQGTRYQ
TRQAVKGTEPPLLFSVAPAPILPHRQEKVIALLFFFFSSRLFPGHCILKALHIPFGII
FKNCFATCFFTFKKFFLFIL"
BASE COUNT 1152 a 991 c 964 g 962 t
ORIGIN
1 cgggagagag gccgctgagg atccggaagc aggaatgtct gctgtgggtg agcctctgtt
61 ctcttttgaa caagagaggc taggccctct gagcagccgc actttctcag tggcagatcc
121 tggctctgca gagagaacag cccagaaaag aaagttcccc agccctccac attcttccaa
181 tggccactcg ccgcaggaca catcaacaag ccccattaaa aagaaaaaga aacctggctt
241 actgaacagt aacaataagg agcaggatgg acggaatgat ttctactgct gggtttgtca
301 ccgggaaggc caagtccttt gctgtgagct ctgtccccgg gtttatcacg ctaagtgtct
361 gagactgaca tcggaaccag agggggactg gttttgtcct gaatgtgaga aaattacagt
421 agcaggatgc atcgagaccc agagtaaagc catgacaatg ctcaccattg aacagtcatc
481 ctacctgctc aagtttgcca ttcagaaaat gaaacagcca gggacagatg cattccagaa
541 gcccgttcca ttggaacagc accctgacta tgcggaatac atcttccatc caatggacct
601 ttgtacattg gaaaagaatg cgaaaaagaa aatgtatggc tgcacagaag ccttcctggc
661 tgatgcaaag tggattttgc acaactgcat catttataat gggggaaatc acaaattgac
721 gcaaatagcg aaagtagtca tcaaaatctg tgaacatgag atgaatgaaa tcgaagtatg
781 tccagaatgt tatctagctg cttgccaaaa acgagataac tggttttgtg agccttgtag
841 caatccacat cctttggtct gggccaaact gaaggggttt ccattctggc ctgcaaaagc
901 tctaagggat aaagacgggc aggtcgatgc ccgattcttt ggacaacatg acagggcctg
961 ggttccaata aataattgct acctcatgtc taaagaaatt cctttttctg tgaaaaagac
1021 taagagcatc ttcaacagtg ccatgcaaga gatggaggtt tacgtggaga acatccgcag
1081 gaagtttggg gtttttaatt actctccatt taggacaccc tacacaccca acagccagta
1141 tcaaatgctg ctcgatccca ccaacccagc gccggcactg ccaagataga caagcaggag
1201 aaggtcaagc tcaactttga catgacgtca tcccccaaga tcctgatgag caagcctgtg
1261 ctgagtgggg gcacaggccg ccggatttcc ttgtcggata tgccgcgctc ccccatgagc
1321 acaaactctt ctgtgcacac gggctccgac gtggagcagg atgctgagaa gaaggccacg
1381 tcgagccact tcagtgcgag cgaggagtcc atggacttcc tggataagag cacagcttca
1441 ccagcctcca ccaagacggg acaagcaggg agtttatccg gcagcccaaa gcccttctct
1501 cctcaactgt cagctcctat cacgacgaaa acggacaaaa cctccaccac cggcagcatc
1561 ctgaatctta acctggatcg aagcaaagct gagatggatt tgaaggagct gagcgagtcg
1621 gtccagcaac agtccacccc tgttcctctc atctctccca agcgccagat tcgtagcagg
1681 ttccagctga atcttgacaa gaccatagag agttgcaaag cacaattagg cataaatgaa
1741 atctcggaag atgtctatac ggccgtagag cacagcgatt cggaggattc tgagaagtca
1801 gatagtagcg atagtgagta tatcagtgat gatgagcaga agtctaagaa cgagccagaa
1861 gacacagagg acaaagaagg ttgtcagatg gacaaagagc catctgctgt taaaaaaaag
1921 cccaagccta caaacccagt ggagattaaa gaggagctga aaagcacgtc accagccagc
1981 gagaaggcag accctggagc agtcaaggac aaggccagcc ctgagcctga gaaggacttt
2041 tccgaaaagg caaaaccttc acctcacccc ataaaggata aactgaaggg aaaagatgag
2101 acggattccc caacagtcca tttgggcctg gactctgatt cagagagcga acttgtcata
2161 gatttaggag aagaccattc tgggcgggag ggtcgaaaaa ataagaagga acccaaagaa
2221 ccatctccca aacaggatgt tgtaggtaaa actccaccat ccacgacggt gggcagccat
2281 tctcccccgg aaacaccggt gctcacccgc tcttccgccc aaacttccgc ggctggcgcc
2341 acagccacca ccagcacgtc ctccacggtc accgtcacgg ccccggcccc cgccgccaca
2401 ggaagcccag tgaaaaagca gaggccgctt ttaccgaagg agactgcccc ggccgtgcag
2461 cgggtcgtgt ggaactcatc tagtaagttt caaacgtcct cccaaaagtg gcacatgcag
2521 aagatgcagc gtcagcagca gcagcagcag cagcaaaacc agcagcagca gcctcagtct
2581 tcccagggga cgagatatca gaccagacag gctgtgaaag gtaccgagcc tccccttctg
2641 ttctccgtgg cgcccgctcc cattttgcca catcgacagg agaaagtcat tgctctttta
2701 tttttttttt ttagttctcg tttgtttccg ggccattgta tcttgaaggc cttgcacatt
2761 ccatttggca ttatttttaa aaattgtttt gctacttgct tttttacttt caaaaagttt
2821 tttttgttca ttttataaat gatacatgca tatattctcc ttaaaaaggg ggcagaaagt
2881 tttacataaa agtctgttat cccgtttacc ttccatttca ttctcttccc ttccacagtg
2941 gccagtatca accgttgtaa aagcttttct atgcatgtat gcatgtatat gtatatatac
3001 atatctgtat gtatatatgt gcgcatcatg tatatgatgc cataaaatta gtcctttttc
3061 cccccttttt ttctttttta aaacataaaa atggtaccat acttgctttt ttcccccacc
3121 catcagcatg ttttggaggt ccatccacat cagcacatac agccctgcct tgttcttttg
3181 gactgctgca tagtatttca tagtttattt aaagcattcc tctactaatg ggcatttagg
3241 ttgctttcag ttttttttct actgtgagca gtgctgcaat gaatatcttt gtataaattt
3301 ccttgtgcac atgagggaac ctcttggagt tattttggaa aaagtacagt gcgagaagtt
3361 gatagcgaag gttaccttag taactggaga ttcgtcacac acacaagatg agccagcctc
3421 aagaaccact tgctgaagtt gcagaatcag aactcccacc agtcctgcag gaggctccat
3481 ctggagctga aactaggcca aacacagtgc tgatctgact ggttggtacc agtttgcctg
3541 gcttttgtga gcattgatgt agatctttct accaggaaac ctgcatctag atcctcaaag
3601 gctgggttct tcaactgaaa ctcatagtga atgcgcccct gtgagggggg ctcatgagca
3661 gcagaatgtg aggttgaaag gtggccaggt cttgaattgg cccccagtga aacccttcac
3721 agatggcgag ggagtgggtc ctgaagaatt ggccaggcga aattgagagt acagttggat
3781 taatcttgct atttaaaaag ttggtggggc aaagccgagt ctaggatatt tgagattggg
3841 attgcggctt cctgtcttct gtcttcatat ctcataagca ggagacttcc ccaggggagt
3901 ttaattgcta ccaagaagag ggtcgggcgt ggtggctcac acctgtaatc ccagcacttt
3961 gggaggccaa ggcaggcaga tcacttgagg ccaggagttc aagaccagcc cagtcaacat
4021 ggtgaaaccc catctctact aaaatggaaa aaaaaaaaaa aaaaaaaac
//