LOCUS AL137693 4386 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp434P202 (from clone DKFZp434P202).
ACCESSION AL137693
VERSION AL137693.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4386)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp434P202) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp434P202
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4386
/db_xref="H-InvDB:HIT000025981"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="434 (synonym: htes3). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp434P202"
/tissue_type="testis"
/note="chromodomain helicase DNA binding protein 5,
N-terminus truncated, differentially spliced"
/db_xref="taxon:9606"
CDS join(<3..1766,1768..>3186)
/codon_start=1
/gene="DKFZp434P202"
/product="hypothetical protein"
/db_xref="GOA:Q659D0"
/db_xref="H-InvDB:HIT000025981.18"
/db_xref="InterPro:IPR000330"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR002464"
/db_xref="InterPro:IPR009462"
/db_xref="InterPro:IPR009463"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR027417"
/db_xref="InterPro:IPR028727"
/db_xref="InterPro:IPR038718"
/db_xref="UniProtKB/TrEMBL:Q659D0"
/protein_id="CAH56377.1"
/translation="IDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDD
KQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEM
GLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKE
SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWAC
LVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNL
EGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKY
YKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS
SLVKSSGKLMLLQKMLKKLRDEGHRLLIFSQMTKMLDLLEDFLEYEGYKYERIDGGIT
GGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR
AHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDD
ILKFGTEELFKDDVEGMMSQGQRVTPIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVE
DSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREI
IKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELS
DNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGF
NARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADG
AETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPG
EVISSDPNTPVPASPAHLLPAPLGLPDKMEAQLGYMDEKDPGAQKPRQPLEVQALPAA
LDRVESEDKHESPASKERAREERPEETEKAPPSPEQLPRASCSVTQAGVQWRHPRLMG
AFISSAQATLPPQLPEQRRCFLRRRRSWTSW"
BASE COUNT 1053 a 1289 c 1303 g 741 t
ORIGIN
1 tgatcgatga catcgacatc ccctactacg acaacctcaa gcaggcctac tggggccaca
61 gggagctgat gctgggagaa gacaccaggc tgcccaagag gctgctcaag aagggcaaga
121 agctgaggga cgacaagcag gagaagccgc cggacacgcc cattgtggac cccacggtca
181 agttcgacaa gcagccatgg tacatcgact ccacaggcgg cacactgcac ccgtaccagc
241 tggagggcct caactggctg cgcttctctt gggcccaggg cactgacacc atcctggccg
301 atgagatggg tctgggcaag acggtgcaga ccatcgtgtt cctttactcc ctctacaagg
361 agggccactc caaagggccc tacctggtta gcgcgcccct ctccaccatc atcaactggg
421 aacgcgagtt tgagatgtgg gcgcccgact tctacgtggt cacctacacg ggggacaagg
481 agagccgctc ggtgattcgg gagaacgagt tttcctttga ggacaacgcc attcggagtg
541 ggaagaaggt attccgtatg aagaaagaag tgcagatcaa attccacgtg ctgctcacct
601 cctatgagct catcaccatc gaccaggcca tcctgggctc catcgagtgg gcctgcctgg
661 tggtagatga ggcccaccgc ctcaagaaca accagtccaa gttttttagg gtcttaaaca
721 gctacaagat tgattacaag ctgctgctga cagggacccc ccttcagaac aacctggagg
781 agctgttcca tctcctcaac ttcctgactc cagagaggtt caacaacctg gagggcttcc
841 tggaggagtt tgctgacatc tccaaggaag accagatcaa gaagctgcat gacctgctgg
901 ggccgcacat gctcaggcgg ctcaaggctg acgtgttcaa gaacatgccg gccaagaccg
961 agctcattgt ccgggtggag ctgagccaga tgcagaagaa gtactacaag ttcatcctca
1021 cacggaactt tgaggcactg aactccaagg ggggcgggaa ccaagtatcg ctgctcaaca
1081 tcatgatgga cctgaaaaag tgctgcaacc acccctacct cttccctgtg gctgccgtgg
1141 aggcccctgt cttgcccaat ggctcctacg atggaagctc cctggtcaag tcttcaggga
1201 agctcatgct gctacagaag atgctgaaga aactgcggga tgaggggcac cgtctgctca
1261 tcttctccca gatgaccaag atgctggacc tcctggagga cttcctggag tacgaaggct
1321 acaagtatga gcggattgat ggtggcatca ccgggggcct ccggcaggag gcaatcgaca
1381 gattcaatgc ccccggggcc cagcagttct gcttcctcct ctcaacccgg gcaggtggtc
1441 tgggcatcaa cctggccacg gcggacactg tcatcatcta cgactcggac tggaacccgc
1501 acaatgacat ccaggccttc agccgcgccc accgcatcgg ccagaacaag aaggtgatga
1561 tctaccgctt cgtgactcgg gcctcggtgg aggagcgcat cacgcaggtg gccaagcgca
1621 agatgatgct cacccacctg gtggtgcggc ccggcctcgg ctccaagtcg gggtccatga
1681 ccaagcagga gctggacgac atcctcaagt tcggcacgga ggaactcttc aaggacgacg
1741 tggagggcat gatgtctcag ggccagacgg gtcacaccca tccctgatgt ccagtcctcc
1801 aaagggggga acttggccgc cagtgcaaag aagaagcacg gtagcacccc gccaggtgac
1861 aacaaggacg tggaggacag cagtgtgatc cactatgacg atgcggccat ctccaagctg
1921 ctggaccgga accaggacgc tacagatgac acggagctac agaacatgaa cgagtacctg
1981 agctccttca aggtggcgca gtacgtggtg cgcgaggagg acggcgtgga ggaggtggag
2041 cgggaaatca tcaagcagga ggagaacgtg gaccccgact actgggagaa gctgctgcgg
2101 caccactatg agcagcagca ggaggacctg gcccgcaacc tgggcaaggg caagcgcatc
2161 cgcaagcagg tcaactacaa cgatgcctcc caggaggacc aggagtggca ggatgagctc
2221 tctgataacc agtcagaata ttccattggc tctgaggatg aggatgagga ctttgaagag
2281 aggccggaag ggcagagtgg acgacgacaa tcccggaggc agctgaagag tgacagggac
2341 aagcccctgc ccccgcttct cgcccgagtt ggtggcaaca tcgaggtgct gggcttcaat
2401 gcccgacagc ggaaggcctt tctgaacgcc atcatgcgct ggggcatgcc cccgcaggac
2461 gccttcaact cccactggct ggtgcgggac cttcgaggga agagcgagaa ggagtttaga
2521 gcctatgtgt ccctcttcat gcggcacctg tgtgagccgg gggcggatgg tgcagagacc
2581 ttcgcagacg gcgtgccccg ggagggcctc tccaggcagc acgtgctgac ccgcatcggg
2641 gtcatgtcac tagttaggaa gaaggttcag gagtttgagc atgtcaacgg gaagtacagc
2701 accccagact tgatccctga ggggcccgag gggaagaagc cgggcgaggt gatctcctcg
2761 gaccccaaca caccagtgcc cgccagccct gcccacctcc tgccagcccc gctgggcctg
2821 ccagacaaaa tggaagccca gctgggctac atggatgaga aagaccccgg ggcacagaag
2881 ccaaggcagc ccctggaagt ccaggccctt ccagccgcct tggatagagt ggagagtgag
2941 gacaagcacg agagcccagc cagcaaggag agagcccgag aggagcggcc agaggagacg
3001 gagaaggccc cgccctcccc ggagcagctg ccgagagcgt cttgctctgt cactcaggct
3061 ggagtgcagt ggcgccatcc tcggctcatg ggagccttta tctcctcggc tcaagcgacc
3121 ctcccacctc agcttcctga acagaggagg tgcttcctga gaaggagaag atcctggaca
3181 agctggagct gagcttgatc cacagcagag gggacagttc cgaactcagg ccagatgaca
3241 ccaaggctga ggagaaggag cccattgaaa cacagcaaaa tggtgacaaa gaggaagatg
3301 acgaggggaa gaaggaggac aagaagggga aattcaagtt catgttcaac atcgcggacg
3361 ggggcttcac ggagttgcac acgctgtggc agaacgagga gcgggctgct gtatcctctg
3421 ggaaaatcta cgacatctgg caccggcgcc atgactactg gctgctggcg ggcatcgtga
3481 cgcacggcta cgcccgctgg caggacatcc agaatgaccc acggtacatg atcctcaacg
3541 agcccttcaa gtctgaggtc cacaagggca actacctgga gatgaagaac aagttcctgg
3601 cccgcaggtt taagctgctg gagcaggcgt tggtcattga ggagcagctc cggagggccg
3661 cgtacctgaa catgacgcag gaccccaacc accccgccat ggccctcaac gcccgcctgg
3721 ctgaagtgga gtgcctcgcc gagagccacc agcacctgtc caaggagtcc cttgctggga
3781 acaagcctgc caatgccgtc ctgcacaagg tcctgaacca gctggaggag ctgctgagcg
3841 acatgaaggc cgacgtgacc cggctgccat ccatgctgtc ccgcatcccc ccggtggccg
3901 cccggctgca gatgtcggag cgcagcatcc tgagccgcct gaccaaccgc gccggggacc
3961 ccaccatcca gcagatatct agccgtcctc gagacttccc tgtgttgcag cgctcatttc
4021 cagctgagcc acgcctgccg ggccacctgc ccgacccaca tgggagagaa aagctgccac
4081 ctttttagga gccagcgcca ccttgggaca aaaagggaaa cctagtaatg ccatcacatg
4141 gaggacgagg cccagctcag ctgggccaga gcccagaagt gccacctcat cataattcaa
4201 gtgttcttcc acacagcgtt gcccccacaa ccacgccgga cgtgccccct cgccaccttt
4261 tccagacgac ttcttagaag agatttcatt tatttgtaca tcttttgcac tttcctattg
4321 aagacttgaa cacgtttgtc ttgataaaag ttggatgacg tatggaagat tcgaaaaaaa
4381 aaaaaa
//