LOCUS AL137357 3920 bp mRNA linear HUM 16-APR-2005
DEFINITION Homo sapiens mRNA; cDNA DKFZp434B2226 (from clone DKFZp434B2226);
partial cds.
ACCESSION AL137357
VERSION AL137357.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3920)
AUTHORS Ansorge W., Wirkner U., Mewes H.W., Gassenhuber J., Wiemann S.
JOURNAL Submitted (15-JAN-2000) to the INSDC. MIPS, Am Klopferspitz 18a,
D-82152 Martinsried, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp434B2226) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://www.mips.biochem.mpg.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..3920
/db_xref="H-InvDB:HIT000025645"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="434 (synonym: htes3). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp434B2226"
/tissue_type="testis"
/db_xref="taxon:9606"
CDS <1..3559
/codon_start=2
/gene="DKFZp434B2226"
/product="hypothetical protein"
/note="strong similarity to Drosophila sidekick (sdk)"
/db_xref="GOA:Q58EX2"
/db_xref="H-InvDB:HIT000025645.17"
/db_xref="HGNC:HGNC:19308"
/db_xref="InterPro:IPR003598"
/db_xref="InterPro:IPR003599"
/db_xref="InterPro:IPR003961"
/db_xref="InterPro:IPR007110"
/db_xref="InterPro:IPR013098"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR036116"
/db_xref="InterPro:IPR036179"
/db_xref="PDB:1WF5"
/db_xref="PDB:1WFN"
/db_xref="PDB:1WFO"
/db_xref="PDB:1WIS"
/db_xref="UniProtKB/Swiss-Prot:Q58EX2"
/protein_id="CAB70709.1"
/translation="VGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVN
IVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVG
YKIKYSRSDGHGKTLSHVVQDRVERDYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTVV
GRTRESVPSSGPTNVSALATTSSSMLGRWSEVPEADRNGLVLGYKVMYKEKDSDTQPR
FWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGI
LFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQYTATGL
KPESVYLFRITAQTRKVWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWE
PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPFTSYKFRVKATND
IGDSEFSEESESLTTLQAAPDEAPTILSVTPHTTTSVLIRWQPPAEDKINGILLGFRI
RYRELLYEGLRGFTLRGINNPGATWAELTSMYSMRNLSRPSLTQYELDNLNKHRRYEI
RMSVYNAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGD
IQGYKIYFWEAQRGNLTERVKTLFLAENSVKLKNLTGYTAYMVSVAAFNAAGDGPRST
PTQGQTQQAAPSAPSSVKFSELTTTSVNVSWEAPQFPNGILEGYRLVYEPCSPVDGVS
KIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRAKTFTYGPEIEANVTTGPGEGAPGPPG
VPIIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLWDILIKDIPKEVSSYTFSM
DILKPGVSYDFRVIAVNDYGFGTPSSPSQSVPAQKANPFYEEWWFLVVIALVGLIFIL
LLVFVLIIRGQSKKYAKKTDSGNSAKSGALGHSEMMSLDESSFPALELNNRRLSVKNS
FCRKNGLYTRSPPRPSPGSLHYSDEDVTKYNDLIPAESSSLTEKPSEISDSQGSDSEY
EVDSNHQKAHSFVNHYISDPTYYNSWRRQQKGISRAQAYSYTESDSGEPDHTTVTNST
STQQGSLFRPKASRTPTPQNPPNPPSQQSTLYRPPSKAGVQKEGENRERMCVASSSSA
LRWWGSLLPWELHGAGEVAVSLLWTRSGPGIWRERGSGG"
polyA_site 3897
BASE COUNT 886 a 1270 c 1124 g 640 t
ORIGIN
1 ggtaggcgtg gttggggagg gagaggagtg gttgctgatc caccagctct ccaatgagcc
61 cgatgcccgc tccatggagg tgcccgacct caaccccttc acctgctaca gcttccgcat
121 gcgccaggtg aacatcgtgg gcaccagccc ccccagtcag ccttctagaa agatccagac
181 cctgcaggca ccccctgaca tggccccagc caatgtgtct ctgcgcacag ccagtgagac
241 cagcctgtgg ctgcgctgga tgcctctccc ggagatggaa tacaatggga accctgagtc
301 cgtgggctat aagatcaagt acagccggtc agacgggcat ggcaagacgc tgagccacgt
361 ggtgcaggac cgtgtggagc gggactacac catcgaggac ctggaggagt ggacagagta
421 ccgcgtccag gtccaggcct tcaacgccat cgggagcggg ccctggagcc agacggtggt
481 gggcaggacc cgggagtcag ttccctcttc cggccccacc aatgtgtctg cactggccac
541 cacctccagc agcatgctgg gtcgctggag cgaggtcccc gaggctgatc gcaacgggct
601 cgtgctgggc tataaggtga tgtataagga gaaggactcg gacacccagc cccgattctg
661 gctggtggaa ggcaactcgt ctcgcagtgc ccagctcacc ggcttgggca aatacgtgct
721 ctatgaagtc caggtgctgg ccttcacacg catcggggac ggcagcccca gccaccctcc
781 catcctggag cggacgctgg atgatgtccc aggaccaccc atgggcatcc tgttcccaga
841 ggtgcggacc acgtctgtgc ggctgatctg gcagccccct gccgccccca atggcatcat
901 tcttgcttac cagatcacac accggctcaa caccaccacg gccaacaccg ccactgtgga
961 ggtgctggca cccagcgccc ggcagtacac agccacgggc ctcaagccag agtctgtcta
1021 cctgttccgc atcacggccc agacccgcaa ggtctgggga gaagctgccg aggccttggt
1081 ggtgaccacc gagaagagag accgtccgca gccccccagc aggccgatgg tgcagcagga
1141 ggatgtgaga gcacgcagcg tgctgctgtc ctgggagcca gggagcgacg ggctctcccc
1201 tgtgcgctac tacaccatcc agacccgcga gctgcccagc ggcaggtggg cactgcactc
1261 ggcctccgtg agccacaatg cctccagctt cattgtggac aggctgaagc ccttcacgtc
1321 ctacaagttc cgagtgaagg cgaccaatga cattggcgac agcgagttca gcgaggagtc
1381 ggagtcactg accaccctgc aggctgcccc cgatgaagca cccaccatcc tctccgtgac
1441 gccccacacc accacctccg tgctaatccg atggcagccg ccagcagagg acaagatcaa
1501 tggcatcctc ctgggcttcc ggatccgata ccgggagctg ctctatgaag gactgagggg
1561 cttcacgctt cgaggcatca acaacccagg ggccacatgg gctgagctta cctccatgta
1621 ctccatgcgg aacctgagcc ggcccagcct cacgcagtac gagctggaca acctgaacaa
1681 gcacaggcgg tacgagatac ggatgagcgt gtacaacgct gtgggtgagg ggccctccag
1741 ccccccgcag gaggtctttg ttggggaggc agtgcccaca gcagcacctc gtaacgtggt
1801 cgtccacggc gccacggcca cacagctgga cgtgacttgg gagccacctc cgctggacag
1861 ccagaatgga gacatccagg ggtacaagat ttatttctgg gaagcccagc gggggaacct
1921 cacagagcga gtgaagacgc ttttcctggc tgagaacagc gtgaagctca agaacttgac
1981 tggctacacg gcctacatgg tcagcgtggc cgccttcaac gccgctgggg atgggcctcg
2041 gagcaccccc acccaaggcc agacccagca agcagccccc agcgctccca gctcggtcaa
2101 gttcagtgag ctgaccacaa cctcagtgaa tgtgtcctgg gaagccccgc agttccccaa
2161 tggcatcctg gagggctaca ggctggtgta cgagccctgc agccccgtgg atggagtcag
2221 caagatcgtg accgtggacg tgaaggggaa cagccccctg tggctgaagg tgaaggacct
2281 ggcggagggg gtgacctaca ggttccgcat cagagccaag accttcacct acgggccgga
2341 gatcgaagcc aacgtcacca cgggccccgg agaaggtgcc ccaggaccgc ctggcgtgcc
2401 catcatcgtg cggtacagct ctgccatcgc cattcactgg tccagcggag acccgggcaa
2461 agggcccatc acccgctacg tcatcgaggc cagaccttca gacgagggac tatgggacat
2521 cctcatcaaa gacatcccca aggaggtgag ctcctacacg ttcagcatgg acatcctgaa
2581 gccgggcgtg agctatgact tccgggtcat cgcggtcaac gactatggtt tcggcacccc
2641 cagcagcccc tcccagtctg tgccagccca gaaagccaac cccttctatg aggagtggtg
2701 gttcttggtg gtcattgccc tggtcggcct catcttcatc ctgcttctgg tcttcgtgct
2761 catcatccgg ggccagagca agaagtacgc caagaagaca gactcgggga acagtgccaa
2821 gtctggagcc ctaggccaca gcgagatgat gagcttggat gaaagcagct tccctgccct
2881 ggaactcaac aacaggcggc tctccgtcaa gaactctttc tgccgaaaga acggcctgta
2941 caccaggtct ccccccaggc ccagcccagg cagcctgcac tactcggatg aggatgtcac
3001 caaatacaac gacctcatcc ctgcagagag cagcagcctg acggagaagc cctcagaaat
3061 ctccgactct cagggaagtg acagcgagta cgaggtcgac tcaaaccacc agaaggccca
3121 ctcctttgtc aaccactaca tcagtgaccc cacatactac aactcgtggc ggcgacagca
3181 gaagggcatc tcgagggcac aggcctacag ctacacggag agcgactcgg gtgagccaga
3241 ccacaccacc gtcaccaaca gcaccagcac ccagcagggc agcctctttc ggcccaaggc
3301 cagtcggact ccaacgcccc agaacccccc taacccccca agtcagcaga gcaccctcta
3361 ccgtcccccc agcaaagccg gcgttcagaa ggagggagaa aaccgtgaga ggatgtgtgt
3421 ggccagcagc tcttcagctt tgagatggtg gggttcactg ctcccttggg aattacatgg
3481 agctggggaa gtggctgtgt cactgctatg gacacggagt gggccgggca tctggagaga
3541 gagagggagc ggaggctaag gactggaggc cgccaggcag gcgtggccga gggaagaaaa
3601 agcttctgga tgtccagcca gctgccccct tccagcccct ccaggacccc tggacccact
3661 gccgctgctc tctgcaaaaa gaatgggcat cccggaagcc acgcctatct tctctctctg
3721 ctcctccttc cctccatgca ccatcactgt ggctggcagg catcggacag cctcatccag
3781 accccctgcc ctgtcttggc aacctctact gcccatctcc cctgctcaac ttctccacca
3841 agcatttggt ttatttagaa aaaggaagaa aaacaaaaaa caaaaaacta aagggtgaaa
3901 aaaaaaaaaa aaaaaaaaaa
//