LOCUS AL136841 3022 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp434M182 (from clone DKFZp434M182).
ACCESSION AL136841
VERSION AL136841.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3022)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp434M182) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp434M182
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..3022
/db_xref="H-InvDB:HIT000025437"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="434 (synonym: htes3). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp434M182"
/tissue_type="testis"
/note="5'-3' exoribonuclease 2"
/db_xref="taxon:9606"
CDS 42..2894
/codon_start=1
/gene="DKFZp434M182"
/product="hypothetical protein"
/db_xref="GOA:Q9H0D6"
/db_xref="H-InvDB:HIT000025437.17"
/db_xref="HGNC:HGNC:12836"
/db_xref="InterPro:IPR004859"
/db_xref="InterPro:IPR017151"
/db_xref="InterPro:IPR027073"
/db_xref="InterPro:IPR041412"
/db_xref="UniProtKB/Swiss-Prot:Q9H0D6"
/protein_id="CAB66775.1"
/translation="MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPN
DVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAI
DGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCI
TPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQ
PNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDC
EGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDD
WVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMI
MLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGILTPHALGSRNSPG
SQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPLGGIKRKAEDSDSEPEPEDN
VRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPF
HYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS
IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGD
VLFVGKHHPLHDFILELYQTGSTEPVEVPPELCHGIQGKFSLDEEAILPDQIVCSPVP
MLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKPSDWEKSSNGRQWKPQ
LGFNRDRRPVHLDQAAFRTLGHVMPRGSGTGIYSNAAPPPVTYQGNLYRPLLRGQAQI
PKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQNAAFQPNQYQMLAG
PGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYNWN"
BASE COUNT 919 a 616 c 713 g 774 t
ORIGIN
1 ctcgtcagcc ggtcggccgc cgcctccagc cgtgtgccgc tatgggagtc ccggcgttct
61 tccgctggct cagccgcaag tacccgtcca tcatagtcaa ctgcgtggaa gagaagccaa
121 aagaatgcaa tggtgtaaag attccagttg atgccagtaa acctaatcca aatgatgtgg
181 agtttgataa tctgtatttg gatatgaatg gaatcatcca tccctgtact catcctgaag
241 acaaaccagc accaaaaaat gaagatgaaa tgatggttgc aatttttgag tacattgaca
301 gacttttcag tattgtaaga ccaagaagac ttctctacat ggcaatagat ggagtggcac
361 cacgtgctaa aatgaaccag cagcgttcaa ggaggttcag ggcatcaaaa gaaggaatgg
421 aagcagcagt cgagaagcag cgagtcaggg aagaaatatt ggcaaaaggt ggctttcttc
481 ctccagaaga aataaaagaa agatttgaca gcaactgtat tacaccagga actgaattca
541 tggacaatct tgctaaatgc cttcgctatt acatagctga tcgtttaaat aatgaccctg
601 ggtggaaaaa tttgacagtt attttatctg atgctagtgc tcctggtgaa ggagaacata
661 aaatcatgga ttacattaga aggcaaagag cccagcctaa ccatgaccca aatactcatc
721 attgtttatg tggagcagat gctgatctca ttatgcttgg ccttgccaca catgaaccga
781 actttaccat tattagagaa gaattcaaac caaacaagcc caaaccatgt ggtctttgta
841 atcagtttgg acatgaggtc aaagattgtg aaggtttgcc aagagaaaag aagggaaagc
901 atgatgaact tgccgatagt cttccttgtg cagaaggaga gtttatcttc cttcggctta
961 atgttcttcg tgagtatttg gaaagagaac tcacaatggc cagcctacca ttcacatttg
1021 atgttgagag gagcattgat gactgggttt tcatgtgctt ctttgtggga aatgacttcc
1081 tccctcattt gccatcgtta gagattaggg aaaatgcaat tgaccgtttg gttaacatat
1141 acaaaaatgt ggtacacaaa actgggggtt accttacaga aagtggttat gtcaatctgc
1201 aaagagtaca gatgatcatg ttagcagttg gtgaagttga ggatagcatt tttaaaaaga
1261 gaaaggatga tgaggacagt tttagaagac gacagaaaga aaaaagaaag agaatgaaga
1321 gagatcaacc agctttcact cctagtggaa tattaactcc tcatgccttg ggttcaagaa
1381 attcaccagg ttctcaagta gccagtaatc cgagacaagc agcctatgaa atgaggatgc
1441 agaataactc tagtccttcg atatctccta atacgagttt cacatctgat ggctccccgt
1501 ctccattagg aggaattaag cgaaaagcag aagacagtga cagtgaacct gagccagagg
1561 ataatgtcag gttatgggaa gctggctgga agcagcggta ctacaagaac aaatttgatg
1621 tggatgcagc tgatgagaaa ttccgtcgga aagttgtgca gtcgtacgtt gaaggacttt
1681 gctgggttct tagatattat taccagggct gtgcttcctg gaagtggtat tatccatttc
1741 attatgcacc atttgcttca gactttgaag gcattgcaga catgccatct gattttgaga
1801 agggtacgaa accgtttaaa ccactagaac aacttatggg ggtatttcca gctgcaagtg
1861 gtaattttct acctccatca tggcggaagc tcatgagtga tcctgattct agtataattg
1921 acttctatcc tgaagatttt gctattgatt tgaatgggaa gaaatatgca tggcaaggtg
1981 ttgctctctt gccattcgtg gatgagcgaa ggctacgagc tgccctagaa gaggtatacc
2041 cagacctcac tccagaagag accagaagaa acagccttgg aggtgatgtc ttatttgtgg
2101 ggaaacatca cccactccat gacttcattt tagagctgta ccagacaggt tccacagagc
2161 cagtggaggt accccctgaa ctatgtcatg ggattcaagg aaagttttct ttggatgaag
2221 aagccattct tccagatcaa atagtatgtt ctcctgttcc tatgttaagg gatctgacac
2281 agaacactgt agtcagtatt aattttaaag acccacagtt tgctgaagat tacattttta
2341 aagctgtaat gcttccagga gcaagaaagc cagcagcagt actgaaacct agtgactggg
2401 aaaaatccag caatggacgg cagtggaagc ctcagcttgg ctttaaccgt gaccggaggc
2461 ctgtgcacct ggatcaggca gccttcagga ctttgggcca tgtgatgcca agaggctcag
2521 gaactggcat ttacagcaat gctgcaccac cacctgtgac ttaccaggga aacttataca
2581 ggccgctttt gagaggacaa gcccagattc caaaacttat gtcaaatatg aggccccagg
2641 attcctggcg aggtcctcct ccccttttcc agcagcaaag gtttgacaga ggcgttgggg
2701 ctgaacctct gctcccatgg aaccggatgc tgcaaaccca gaatgcagcc ttccagccaa
2761 accagtacca gatgctagct gggcctggtg ggtatccacc cagacgagat gatcgtggag
2821 ggagacaggg atatcccaga gaaggaagga aatacccttt gccaccaccc tcaggaagat
2881 acaattggaa ttaagctttt gtaaagcttt cccaaatcct ttcatcattc tacagtttta
2941 tgctatttgt ggaaagattt ccttctcaag tagtagtttt taataaaact acagtacttt
3001 gtgtaaaaaa aaaaaaaaaa aa
//