LOCUS AL136784 4501 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp434L0718 (from clone DKFZp434L0718).
ACCESSION AL136784
VERSION AL136784.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4501)
AUTHORS Ottenwaelder B., Obermaier B., Deutschenbaur S., Schaipp A.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Medigenomix (Martinsried/Germany) within the cDNA
sequencing
consortium of the German Genome Project.
This clone (DKFZp434L0718) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp434L0718
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4501
/db_xref="H-InvDB:HIT000025380"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="434 (synonym: htes3). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp434L0718"
/tissue_type="testis"
/note="VPS9-ankyrin repeat-containing protein (Mus
musculus)"
/db_xref="taxon:9606"
CDS 134..3286
/codon_start=1
/gene="DKFZp434L0718"
/product="hypothetical protein"
/db_xref="GOA:Q96NW4"
/db_xref="H-InvDB:HIT000025380.18"
/db_xref="HGNC:HGNC:25310"
/db_xref="InterPro:IPR002110"
/db_xref="InterPro:IPR003123"
/db_xref="InterPro:IPR020683"
/db_xref="InterPro:IPR036770"
/db_xref="InterPro:IPR037191"
/db_xref="PDB:4B93"
/db_xref="PDB:4CYM"
/db_xref="PDB:4CZ2"
/db_xref="UniProtKB/Swiss-Prot:Q96NW4"
/protein_id="CAB66718.1"
/translation="MALYDEDLLKNPFYLALQKCRPDLCSKVAQIHGIVLVPCKGSLS
SSIQSTCQFESYILIPVEEHFQTLNGKDVFIQGNRIKLGAGFACLLSVPILFEETFYN
EKEESFSILCIAHPLEKRESSEEPLAPSDPFSLKTIEDVREFLGRHSERFDRNIASFH
RTFRECERKSLRHHIDSANALYTKCLQQLLRDSHLKMLAKQEAQMNLMKQAVEIYVHH
EIYNLIFKYVGTMEASEDAAFNKITRSLQDLQQKDIGVKPEFSFNIPRAKRELAQLNK
CTSPQQKLVCLRKVVQLITQSPSQRVNLETMCADDLLSVLLYLLVKTEIPNWMANLSY
IKNFRFSSLAKDELGYCLTSFEAAIEYIRQGSLSAKPPESEGFGDRLFLKQRMSLLSQ
MTSSPTDCLFKHIASGNQKEVERLLSQEDHDKDTVQKMCHPLCFCDDCEKLVSGRLND
PSVVTPFSRDDRGHTPLHVAAVCGQASLIDLLVSKGAMVNATDYHGATPLHLACQKGY
QSVTLLLLHYKASAEVQDNNGNTPLHLACTYGHEDCVKALVYYDVESCRLDIGNEKGD
TPLHIAARWGYQGVIETLLQNGASTEIQNRLKETPLKCALNSKILSVMEAYHLSFERR
QKSSEAPVQSPQRSVDSISQESSTSSFSSMSAGSRQEETKKDYREVEKLLRAVADGDL
EMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVT
SQDGSSPLHVAALHGRADLIRLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLD
SNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHV
FVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVASLDDVAETDRKEY
VTVKIRKKWNSKLYDLPDEPFTRQFYFVHSAGQFKGKTSREIMARDRSVPNLTEGSLH
EPGRQSVTLRQNNLPAQSGSHAAEKGNSDWPERPGLTQTGPGHRRMLRRHTVEDAVVS
QGPEAAGPLSTPQEVSASRS"
BASE COUNT 1265 a 1070 c 1105 g 1061 t
ORIGIN
1 gatcgccgcg cgagggtggt gggcatcgag gtcccagcag cggacgaggg aggtgccgcc
61 gtcgcccagg atgggctggg aatgaagcga tgtagccttt taagagattt gctctgaccc
121 atctgaagtc catatggctc tgtatgatga agacctcctg aaaaatcctt tctatctggc
181 tctgcaaaag tgccgccctg acttgtgcag caaagtggcc caaatccatg gcattgtctt
241 agtaccctgc aaaggaagcc tgtcgagcag catccagtct acttgtcagt ttgagtccta
301 cattttgata cctgtggaag agcattttca gaccttaaat ggaaaggatg tctttattca
361 agggaacagg attaaattag gagctggttt tgcctgtctt ctctcagtgc ccattctctt
421 tgaagaaact ttctacaatg aaaaagaaga gagtttcagc atcctgtgta tagcccatcc
481 tttggaaaag agagagagtt cagaagagcc tttggcaccc tcagatccct tttccctgaa
541 aaccattgaa gatgtgagag agttcttggg aagacactcc gagcgatttg acaggaacat
601 cgcctctttc catcgaacat tccgagaatg cgagagaaag agcctccgtc accacataga
661 ctcagcgaat gctctctaca ccaaatgcct ccagcagctt ctgagggact ctcacctgaa
721 aatgctcgcc aagcaggagg cccagatgaa cctgatgaag caggcagtgg agatatacgt
781 ccatcatgaa atttacaacc tgatctttaa atacgtgggg accatggagg caagtgagga
841 tgcggccttt aacaaaatca caagaagcct tcaagatctt cagcagaaag atattggtgt
901 gaaaccggag ttcagcttta acatacctcg tgccaaaaga gagctggctc agctgaacaa
961 atgcacctcc ccacagcaga agcttgtctg cttgcgaaaa gtggtgcagc tcattacaca
1021 gtctccaagc cagagagtga acctggagac catgtgtgct gatgatctgc tatcagtcct
1081 gttatacttg cttgtgaaaa cggagatccc taattggatg gcaaatttga gttacatcaa
1141 aaacttcagg tttagcagct tggcaaagga tgaactggga tactgcctga cctcattcga
1201 agctgccatt gaatatattc ggcaaggaag cctctctgct aaaccccctg agtctgaggg
1261 atttggagac aggctgttcc ttaagcagag aatgagctta ctctctcaga tgacttcgtc
1321 tcccaccgac tgcctgttta agcacattgc atcaggtaac cagaaagaag tggagagact
1381 tctgagccaa gaggaccatg ataaagatac cgtccaaaag atgtgtcacc ctctctgctt
1441 ctgcgatgac tgtgagaaac tcgtctctgg gaggttgaat gatccctcag ttgtcactcc
1501 attctccaga gacgacaggg ggcacacccc tctccatgtg gctgctgtct gtgggcaggc
1561 atccctcatc gacctcctgg tttccaaggg cgccatggta aatgccacag actaccatgg
1621 ggccactccg ctccacctgg cctgtcagaa gggctaccag agcgtgacgc tgctgctgct
1681 gcactacaag gccagcgcgg aagtgcagga caacaatggg aatacgccac tccacctggc
1741 ctgcacctac ggccacgagg actgtgtgaa ggctctggtt tactacgacg tggagtcgtg
1801 cagacttgac attggcaatg agaaaggaga cacccctcta cacattgctg cccgctgggg
1861 ctaccaaggc gtcatagaga cattgctgca gaacggagcg tccaccgaga tccagaacag
1921 actgaaggag acgcccctca agtgtgcatt aaactcaaag attctgtctg taatggaagc
1981 ctatcacctg tccttcgaga ggaggcagaa gtcgtccgag gcccctgtgc agtccccgca
2041 gcgctccgtg gactccatca gccaagagtc ctccacttcc agcttctcct ccatgtcagc
2101 cggctcaagg caggaggaga ccaagaagga ctacagagag gtagaaaaac ttttgagagc
2161 agttgctgat ggagatctag aaatggtgcg ttacctgttg gaatggacag aggaggacct
2221 ggaggatgcg gaggacactg tcagtgcagc agaccccgaa ttctgtcacc cgttgtgcca
2281 gtgccccaag tgtgccccag ctcagaagag gctggcgaag gttcctgcca gtgggcttgg
2341 tgtgaacgtg accagccagg acggctcctc cccgctgcat gtcgccgccc tgcacggccg
2401 ggcggacctc atccgcctcc tgctgaagca cggggccaac gcaggtgcca ggaacgcaga
2461 ccaagccgtc ccgctccacc tggcctgcca gcagggccac tttcaggtgg tgaagtgtct
2521 gttagattcg aatgcaaaac ccaataagaa ggacctcagt ggaaacacgc ccctcattta
2581 cgcctgctcc ggtggccatc acgagcttgt ggcactgctg ctacagcacg gggcctccat
2641 taacgcttct aacaataagg gcaacacagc gctgcacgag gctgtgattg aaaagcacgt
2701 cttcgtggta gagctgcttc tgctccacgg agcgtcagtt caggtgctga acaagcggca
2761 gcgcacggct gtagactgtg ctgaacagaa ttcaaaaata atggaattgc ttcaggtggt
2821 accaagctgt gttgcttcat tagatgatgt ggctgaaact gaccgcaagg agtatgtcac
2881 tgttaagatc aggaaaaaat ggaactcaaa actgtatgat ctaccagatg agccttttac
2941 aagacagttt tactttgtcc actcagctgg tcagtttaag ggaaagactt caagggagat
3001 tatggcaaga gatagaagtg tccctaattt aaccgaaggt tctttgcatg agccagggag
3061 gcaaagtgtc acactgagac agaataacct gccagctcag agtggatctc atgctgctga
3121 gaaaggcaac agcgactggc cagagaggcc tggactgaca cagactggcc ctggacacag
3181 acggatgctg cggagacaca cggtagagga tgcggtcgtg tcccagggcc cggaggctgc
3241 tggccccctc tccactcccc aagaggttag tgcttcccgg tcctaacagg aatgaggagt
3301 tgttgaaccc actgctagga agcaaggatg caacaagatg atgctgagcg tgaacacatc
3361 tgagaactaa atgtgcttcc atgagactgg cttgagaagt cttcagcacc aagttcctga
3421 aagcttttct gtggcaggaa agaatgcaac aaaaaagtta accaccacca tctctctcct
3481 cttcaaagct aatgaataca attgaaacag acaaaaattc cagtagcatc cagatcctta
3541 agccagaggt gcatgcttct ttttaagtat gagggtttgt tggtcacagt gggagaggtt
3601 tcaccaccgc attctgacct cctcctccca aaaggtgcta aacctctctg acctgtgtac
3661 attcacaaac cacagctaga attcctccac ctaggattaa gctggagaga agtaagtaat
3721 ttaggtttca tggtactgta gaggccaggc tgaaatgtca tatctgaagg aagaaagcag
3781 cagctggaca atgtttcttt gcaaagcaac actcgaacca aaagatgcct caatcccatt
3841 ttgatattca ttttagtgaa aggatgcatc agacctgttc cacatcatgc acatgggaaa
3901 gggtggttat cattttcctt ctaacaagta ggtacagata ttcggttact acacgtgcac
3961 ctgtagcagt atttctagaa acatcccttt ttgttgagaa cctcccttga atgtctgtca
4021 cactcacacc tgacgggatg gttactggat tagagagtag atttggcaca tcttttctta
4081 gtcttttgat tcaaattcaa aacttaacag cacaaaccag gtcagagtta ctttcggtta
4141 gaatttattg ccatttattc ctttttataa atttctatag attatactgt tatttttatg
4201 ttattggcct agagctacac gtatatgggt ttgtcctgag tccgttttca aatgaccttg
4261 tgatagggaa atggttttgt ccatgttctt ggaaatactt gtgtatgtac agaaggaagg
4321 gagggattat ttttctacaa agtaatttat gatttctaat tttctaatgt gccttggata
4381 tgtgccaaat gatggaaaag aaacagtaaa ctttatgatt cttaaaaaaa aaaaaaaaaa
4441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaag
4501 g
//