LOCUS AL136727 3084 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp566K144 (from clone DKFZp566K144).
ACCESSION AL136727
VERSION AL136727.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3084)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp566K144) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp566K144
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..3084
/db_xref="H-InvDB:HIT000025323"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="566 (synonym: hfkd2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp566K144"
/tissue_type="kidney"
/note="RAB6C, member RAS oncogene family"
/db_xref="taxon:9606"
CDS 456..1220
/codon_start=1
/gene="DKFZp566K144"
/product="hypothetical protein"
/db_xref="GOA:Q9H0N0"
/db_xref="H-InvDB:HIT000025323.17"
/db_xref="HGNC:HGNC:16525"
/db_xref="InterPro:IPR001806"
/db_xref="InterPro:IPR005225"
/db_xref="InterPro:IPR027417"
/db_xref="UniProtKB/Swiss-Prot:Q9H0N0"
/protein_id="CAB66661.1"
/translation="MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQA
IIGIDFLSKTMYLEDGTIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQ
QTTKWIDDVRTERGSDVIITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKTG
YNVKQLFRRVAAALPGMESTQDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLP
QKPPYSFIDCSVNIGLNLFPSLITFCNSSLLPVSWR"
BASE COUNT 881 a 665 c 662 g 876 t
ORIGIN
1 ggggcactca gcaggttggg ctgcggcggc ggcggctggg gaagccgaag cgccgcgcgt
61 gagagatccc ggatacatct gcggtttggg ctccgccacc ctccgtctct ctcccgcagg
121 tctctgagcc gggtgcggaa ggagggaacg gccctagcct tgggaagcca aagcacaccc
181 ctggctcccg ccgacaccgc cctccttccc ttcccagccg cgggcctcgc tccgtgctcg
241 gctactctgc cgggaggcgg cggcggctgc cagtctgtgg cgagccctgc tgccctccag
301 ccgggcttct ccagccgggc tcctccaccg gcccttgcag gggcacagag agctcggcgc
361 ccgcccttcc gctcgccttt ttcgtcagcc ggctggagga gcatcggtcc gggaggtctc
421 tgggctgagg cggcgacagc tcctctagtt ccaccatgtc cgcgggcgga gacttcggga
481 atccgctgag gaaattcaag ctggtgttcc tgggggagca aagcgttgca aagacatctt
541 tgatcaccag attcaggtat gacagttttg acaacaccta tcaggcaata attggcattg
601 actttttatc aaaaactatg tacttggagg atggaacaat cgggcttcgg ctgtgggata
661 cggcgggtca ggaacgtctc cgtagcctca ttcccaggta catccgtgat tctgctgcag
721 ctgtagtagt ttacgatatc acaaatgtta actcattcca gcaaactaca aagtggattg
781 atgatgtcag aacagaaaga ggaagtgatg ttatcatcac gctagtagga aatagaacag
841 atcttgctga caagaggcaa gtgtcagttg aggagggaga gaggaaagcc aaagggctga
901 atgttacgtt tattgaaact agggcaaaaa ctggatacaa tgtaaagcag ctctttcgac
961 gtgtagcagc agctttgccg ggaatggaaa gcacacagga cggaagcaga gaagacatga
1021 gtgacataaa actggaaaag cctcaggagc aaacagtcag cgaagggggt tgttcctgct
1081 actctcccat gtcatcttca acccttcctc agaagccccc ttactctttc attgactgca
1141 gtgtgaatat tggcttgaac cttttccctt cattaataac gttttgcaat tcatcattgc
1201 tgcctgtctc gtggaggtga tctattagct tcacaagcac aaaaaaagtc agcgtcttca
1261 ttatttatat tttacaaaaa gccaaattat ttcagcatat tccggtgata actttaaaaa
1321 ttagatacat tttcttaaca tttttttctt ttttaatgtt atgataatgt acttcaaaat
1381 gatggaaatc tcaacagtat gagtatggct tggttaacga gcagtatgtt cacagcctgc
1441 tttatctctc cttgctcttc tcacctctcc cttaccccgt tccctatttc cgtgttctta
1501 cctagcctcc ccccacttcc tcaaaacaaa caagagatgg caaagcagca gtccgaccaa
1561 gcccactgga attatccttt aattttacag ataccacttg ctgtaggctg tggaccaaga
1621 tgtccagaat tattcttgag cactgatgta aattacttag atcttctttg aggtcagaat
1681 tcagcgatca cggtaggcag tgcttgaatg agaaaagcct cctggtgcat cttcaaaatg
1741 agtcctaaag aacatactga gtacttataa gtagcagaac ataaaatgta tttctgacta
1801 acacaaatgg tcctttcaca tgtgctttat tagactctgg gagagaaaag taaccaagtg
1861 cttcagaaca ggtttttagt atttacttct tcatggtaag ataatgaagt tctaatgaac
1921 tatttctccc aaggttttaa aattgtcaag agttattctg tttgtttaaa aagtaagaaa
1981 cctctgtaag caatagattt tgcttgggtt ttctttctta aaaaaataat actatgcagg
2041 caagacacca taaaagttta attccttaca gaagaaccag tggaagaatt taaatttggc
2101 actacgatca aaactactga attagcagaa ataacgatat ctaaagctta ccagcaaaag
2161 aaccctcagc agaatagcaa aaactttgct caggacattt gaggtcaaat tgaagacgga
2221 agacggaaac cggaaaccgt tttcttgtaa gcccctagag gcagatcagg taagcataca
2281 tagtagaggg aaaggagaga atggaaataa aactgaatat tatgcagatt tatgccttat
2341 tttttagcat tttttaaggt tgggtctttc aggctggttt tggtttgtat tagatctgta
2401 tagtttagtg atttagtttt atatttaagc tacgattaat attttttctt tggcgatatt
2461 tctttgcttt ttttttttaa caactttcca tttttagatg tttcgttgaa tctatttaga
2521 gcttcaccat ggcaatatgt atttccctta aaacactgca aacaaatata ctaggagtgt
2581 gcccttttaa tctttactag ttattgtgag actgctgtgt aagctaataa acacatttgt
2641 aaaaacattg tttgcaggaa gaaaacttcg agttacaggt caggaaaagc ctgctgaatt
2701 tatgttgtaa acgttactta acacagtata aagatgaaaa gacaacaaaa gtatcttcat
2761 acttcctcat cccctcattg caacaaaacc ttaaactggg agaaccttag tcccctctct
2821 ttcctcttcc tcctccactt cccacttatt gccactttgt aatattcaga gagcacttgg
2881 attatggatc tgaatagaga aatgcttaca gataatcatt agcccacata ccagtaactt
2941 atacttaaag atgggatgga gttataaagt gcttttataa tccaatataa ttgctaaagg
3001 caagggttga ctctttgttt tattttgaca tggcatgtcc tgaaataaat attggttcac
3061 tatgaaaaaa aaaaaaaaaa aaaa
//