LOCUS AL136710 3470 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp566P0524 (from clone DKFZp566P0524).
ACCESSION AL136710
VERSION AL136710.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3470)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (20-JAN-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp566P0524) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp566P0524
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..3470
/db_xref="H-InvDB:HIT000025306"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="566 (synonym: hfkd2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp566P0524"
/tissue_type="kidney"
/note="ankyrin G (ANK-3), differentially spliced,
alternative start"
/db_xref="taxon:9606"
CDS 309..2744
/codon_start=1
/gene="DKFZp566P0524"
/product="hypothetical protein"
/db_xref="GOA:Q12955"
/db_xref="H-InvDB:HIT000025306.16"
/db_xref="HGNC:HGNC:494"
/db_xref="InterPro:IPR000488"
/db_xref="InterPro:IPR000906"
/db_xref="InterPro:IPR002110"
/db_xref="InterPro:IPR011029"
/db_xref="InterPro:IPR020683"
/db_xref="InterPro:IPR036770"
/db_xref="InterPro:IPR037971"
/db_xref="InterPro:IPR040745"
/db_xref="PDB:4O6X"
/db_xref="UniProtKB/Swiss-Prot:Q12955"
/protein_id="CAB66645.1"
/translation="MALPQSEDAMTGDTDKYLGPQDLKELGDDSLPAEGYMGFSLGAR
SASLRSFSSDGSYTLNRSSYARDSMMIEELLVPSKEQHLTFTREFDSDSLRHYSWAAD
TLDNVNLVPSPIHSGFLVSFMVDARGGSMRGSRHHGMRIIIPPRKCTAPTRITCRLVK
RHKLANPPPMVEGEGLASRLVEMGPAGAQFLGPVIVEIPHFGSMRGKERELIVLRSEN
GETWKEHQFDSKNEDLTELLNGMDEELDSPEELGKKRICRIITKDFPQYFAVVSRIKQ
ESNQIGPEGGILSSTTVPLVQASFPEGALTKRIRVGLQAQPVPDEIVKKILGNKATFS
PIVTVEPRRRKFHKPITMTIPVPPPSGEGVSNGYKGDTTPNLRLLCSITGGTSPAQWE
DITGTTPLTFIKDCVSFTTNVSARFWLADCHQVLETVGLATQLYRELICVPYMAKFVV
FAKMNDPVESSLRCFCMTDDKVDKTLEQQENFEEVARSKDIEVLEGKPIYVDCYGNLA
PLTKGGQQLVFNFYSFKENRLPFSIKIRDTSQEPCGRLSFLKEPKTTKGLPQTAVCNL
NITLPAHKKIEKTDGRQSFASLALRKRYSYLTEPGMSPQSPCERTDIRMAIVADHLGL
SWTELARELNFSVDEINQIRVENPNSLISQSFMFLKKWVTRDGKNATTDALTSVLTKI
NRIDIVTLLEGPIFDYGNISGTRSFADENNVFHDPVDGYPSLQVELETPTGLHYTPPT
PFQQDDYFSDISSIESPLRTPSRLSDGLVPSQGNIEHSADGPPVVTAEDASLEDSKLE
DSVPLTEMPEAVM"
BASE COUNT 1090 a 714 c 819 g 847 t
ORIGIN
1 agctttaaaa ggatgtctgc gaagtggtca aaaggatctt aacctcaatt aagtggggtt
61 ttttaaaaag attttttggg gggcctgaaa ttttgaaaat cttcgaactc tgagtgggga
121 aagatgtata attcctcaat tgcctacgag gatatcaaga tgctgagagg aattcagcgg
181 tggtgaagag agtggataca aaccagggat tggtttcctt gagctgtttt ggaggttgat
241 tctaaatcac tgcttaagga attcctggaa acatcaggaa aacatttgat catccaagcc
301 tagtggaaat ggctttaccg cagagtgaag atgcaatgac cggggacaca gacaaatatc
361 ttgggccaca ggaccttaag gaattgggtg atgattccct gcctgcagag ggttacatgg
421 gctttagtct cggagcgcgt tctgccagcc tccgctcctt cagttcggat gggtcttaca
481 ccttgaacag aagctcctat gcacgggaca gcatgatgat tgaagaactc ctcgtgccat
541 ccaaagagca gcatctaaca ttcacaaggg aatttgattc agattctctt agacattaca
601 gctgggctgc agacacctta gacaatgtca atcttgttcc aagccccatt cattctgggt
661 ttctggttag ctttatggtg gacgcgagag ggggctccat gagaggaagc cgtcatcacg
721 ggatgagaat catcattcct ccacgcaagt gtacggcccc cactcgaatc acctgccgtt
781 tggtaaagag acataaactg gccaacccac cccccatggt ggaaggagag ggattagcca
841 gtaggctggt agaaatgggt cctgcagggg cacaattttt aggccctgtc atagtggaaa
901 tccctcactt tgggtccatg agaggaaaag agagagaact cattgttctt cgaagtgaaa
961 atggtgaaac ttggaaggag catcagtttg acagcaaaaa tgaagattta accgagttac
1021 ttaatggcat ggatgaagaa cttgatagcc cagaagagtt agggaaaaag cgtatctgca
1081 ggattatcac gaaagatttc ccccagtatt ttgcagtggt ttcccggatt aagcaggaaa
1141 gcaaccagat tggtcctgaa ggtggaattc tgagcagcac cacagtgccc cttgttcaag
1201 catctttccc agagggtgcc ctaactaaaa gaattcgagt gggcctccag gcccagcctg
1261 ttccagatga aattgtgaaa aagatccttg gaaacaaagc aacttttagc ccaattgtca
1321 ctgtggaacc aagaagacgg aaattccata aaccaatcac aatgaccatt ccggtgcccc
1381 cgccctcagg agaaggtgta tccaatggat acaaagggga cactacaccc aatctgcgtc
1441 ttctctgtag cattacaggg ggcacttcgc ctgctcagtg ggaagacatc acaggaacaa
1501 ctcctttgac gtttataaaa gattgtgtct cctttacaac caatgtttca gccagatttt
1561 ggcttgcaga ctgccatcaa gttttagaaa ctgtggggtt agccacgcaa ctgtacagag
1621 aattgatatg tgttccatat atggccaagt ttgttgtttt tgccaaaatg aatgatcccg
1681 tagaatcttc cttgcgatgt ttctgcatga cagatgacaa agtggacaaa actttagagc
1741 aacaagagaa ttttgaggaa gtcgcaagaa gcaaagatat tgaggttctg gaaggaaaac
1801 ctatttatgt tgattgttat ggaaatttgg ccccacttac caaaggagga cagcaacttg
1861 tttttaactt ttattctttc aaagaaaata gactgccatt ttccatcaag attagagaca
1921 ccagccaaga gccctgtggt cgtctgtctt ttctgaaaga accaaagaca acaaaaggac
1981 tgcctcaaac agcggtttgc aacttaaata tcactctgcc agcacataaa aagattgaga
2041 aaacagatgg acgacagagc ttcgcatcct tagctttacg taagcgctac agctacttga
2101 ctgagcctgg aatgagtcca cagagtccat gtgaacggac agatatcagg atggcaatag
2161 tagccgatca cctgggactt agttggacag aactggcaag ggaactgaat ttttcagtgg
2221 atgaaatcaa tcaaatacgt gtggaaaatc caaattcttt aatttctcag agcttcatgt
2281 ttttaaaaaa atgggttacc agagacggaa aaaatgccac aactgatgcc ttaacttcgg
2341 tcttgacaaa aattaatcga atagatatag tgacactgct agaaggacca atatttgatt
2401 atggaaatat ttcaggcacc agaagttttg cagatgagaa caatgttttc catgaccctg
2461 ttgatggtta tccttccctt caagtggaac tggaaacccc cacagggttg cactacacac
2521 cacctacccc tttccagcaa gatgattatt ttagtgatat ctctagcata gaatctcccc
2581 ttagaacccc tagtagactg agtgatgggc tagtgccttc ccaggggaac atagagcatt
2641 ccgcagatgg acctccagtc gtaactgcag aagacgcttc cttagaagac agcaaactgg
2701 aagactcagt gcctttaaca gaaatgcctg aagcagtgat gtagatgaga gccagttgga
2761 gaatgtatgt ctgagttggc agaatgagac atcaagtgga aacctagagt cctgcgctca
2821 agctcgaaga gtaactggtg ggttactaga tcgactggat gacagccctg accagtgtag
2881 agattccatt acctcatatc tcaaaggaga agctggcaaa tttgaagcaa atggaagcca
2941 tacagaaatc actccagaag caaagacaaa atcttacttt ccagaatccc aaaatgatgt
3001 aggaaaacag agtaccaagg aaactctgaa accaaaaata catggatctg gtcatgttga
3061 agaaccagca tcaccactag cagcatatca gaaatctcta gaagaaacca gcaagcttat
3121 aatagaagag actaaaccct gtgtgcctgt cagtatgaaa aagatgagta ggacttctcc
3181 agcagatggc aagccaaggc ttagcctcca tgaagaagag gggtccagtg ggtctgagca
3241 aaagcaggga gaaggtttta aggtgaaaac gaagaaagaa atccggcatg tggaaaagaa
3301 gagccactcg taacagcgaa cggtcagtca aggatcataa gtttttactg ccagtattga
3361 gaaattcgtg gaagaaatgt cagcaggaag taaaaattca ccgagaagtg tgtgtgtgtt
3421 cgctgcttcc acacattaat ggcatgattt tttttatgca aaaaaaaaaa
//