LOCUS AL136700 1860 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp564I2482 (from clone DKFZp564I2482).
ACCESSION AL136700
VERSION AL136700.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1860)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany)
within the cDNA sequencing consortium of the German Genome Project.
This clone (DKFZp564I2482) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp564I2482
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..1860
/db_xref="H-InvDB:HIT000025296"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="564 (synonym: hfbr2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp564I2482"
/tissue_type="brain"
/note="DEAD (Asp-Glu-Ala-Asp) box polypeptide 56"
/db_xref="taxon:9606"
CDS 10..1653
/codon_start=1
/gene="DKFZp564I2482"
/product="hypothetical protein"
/db_xref="GOA:Q9NY93"
/db_xref="H-InvDB:HIT000025296.17"
/db_xref="HGNC:HGNC:18193"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014014"
/db_xref="InterPro:IPR027417"
/db_xref="UniProtKB/Swiss-Prot:Q9NY93"
/protein_id="CAB66635.1"
/translation="MEDSEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEG
KDLLARARTGSGKTAAYAIPMLQLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMI
QQLATYCARDVRVANVSAAEDSVSQRAVLMEKPDVVVGTPSRILSHLQQDSLKLRDSL
ELLVVDEADLLFSFGFEEELKSLLCHLPRIYQAFLMSATFNEDVQALKELILHNPVTL
KLQESQLPGPDQLQQFQVVCETEEDKFLLLYALLKLSLIRGKSLLFVNTLERSYRLRL
FLEQFSIPTCVLNGELPLRSRCHIISQFNQGFYDCVIATDAEVLGAPVKGKRRGRGPK
GDKASDPEAGVARGIDFHHVSAVLNFDLPPTPEAYIHRAGRTARANNPGIVLTFVLPT
EQFHLGKIEELLSGENRGPILLPYQFRMEEIEGFRYRCRDAMRSVTKQAIREARLKEI
KEELLHSEKLKTYFEDNPRDLQLLRHDLPLHPAVVKPHLGHVPDYLVPPALRGLVRPH
KKRKKLSSSCRKAKRAKSQNPLRSFKHKGKKFRPTAKPS"
BASE COUNT 420 a 531 c 501 g 408 t
ORIGIN
1 agcagcgcca tggaggactc tgaagcactg ggcttcgaac acatgggcct cgatccccgg
61 ctccttcagg ctgtcaccga tctgggctgg tcgcgaccta cgctgatcca ggagaaggcc
121 atcccactgg ccctagaagg gaaggacctc ctggctcggg cccgcacggg ctccgggaag
181 acggccgctt atgctattcc gatgctgcag ctgttgctcc ataggaaggc gacaggtccg
241 gtggtagaac aggcagtgag aggccttgtt cttgttccta ccaaggagct ggcacggcaa
301 gcacagtcca tgattcagca gctggctacc tactgtgctc gggatgtccg agtggccaat
361 gtctcagctg ctgaagactc agtctctcag agagctgtgc tgatggagaa gccagatgtg
421 gtagtaggga ccccatctcg catattaagc cacttgcagc aagacagcct gaaacttcgt
481 gactccctgg agcttttggt ggtggacgaa gctgaccttc ttttttcctt tggctttgaa
541 gaagagctca agagtctcct ctgtcacttg ccccggattt accaggcttt tctcatgtca
601 gctactttta acgaggacgt acaagcactc aaggagctga tattacataa cccggttacc
661 cttaagttac aggagtccca gctgcctggg ccagaccagt tacagcagtt tcaggtggtc
721 tgtgagactg aggaagacaa attcctcctg ctgtatgccc tgctcaagct gtcattgatt
781 cggggcaagt ctctgctctt tgtcaacact ctagaacgga gttaccggct acgcctgttc
841 ttggaacagt tcagcatccc cacctgtgtg ctcaatggag agcttccact gcgctccagg
901 tgccacatca tctcacagtt caaccaaggc ttctacgact gtgtcatagc aactgatgct
961 gaagtcctgg gggccccagt caagggcaag cgtcggggcc gagggcccaa aggggacaag
1021 gcctctgatc cggaagcagg tgtggcccgg ggcatagact tccaccatgt gtctgctgtg
1081 ctcaactttg atcttccccc aacccctgag gcctacatcc atcgagctgg caggacagca
1141 cgcgctaaca acccaggcat agtcttaacc tttgtgcttc ccacggagca gttccactta
1201 ggcaagattg aggagcttct cagtggagag aacaggggcc ccattctgct cccctaccag
1261 ttccggatgg aggagatcga gggcttccgc tatcgctgca gggatgccat gcgctcagtg
1321 actaagcagg ccattcggga ggcaagattg aaggagatca aggaagagct tctgcattct
1381 gagaagctta agacatactt tgaagacaac cctagggacc tccagctgct gcggcatgac
1441 ctacctttgc accccgcagt ggtgaagccc cacctgggcc atgttcctga ctacctggtt
1501 cctcctgctc tccgtggcct ggtacgccct cacaagaagc ggaagaagct gtcttcctct
1561 tgtaggaagg ccaagagagc aaagtcccag aacccactgc gcagcttcaa gcacaaagga
1621 aagaaattca gacccacagc caagccctcc tgaggttgtt gggcctctct ggagctgagc
1681 acattgtgga gcacaggctt acacccttcg tggacaggcg aggctctggt gcttactgca
1741 cagcctgaac agacagttct ggggccggca gtgctgggcc ctttagctcc ttggcacttc
1801 caagctggca tcttgcccct tgacaacaga ataaaaattt tagctgcccc aaaaaaaaaa
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