LOCUS AL136654 2976 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp564A1164 (from clone DKFZp564A1164).
ACCESSION AL136654
VERSION AL136654.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2976)
AUTHORS Bahr A., Lauber J., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Qiagen (Hilden/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp564A1164) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp564A1164
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..2976
/db_xref="H-InvDB:HIT000025250"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="564 (synonym: hfbr2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp564A1164"
/tissue_type="brain"
/note="kin of IRRE-like 2 isoform c"
/db_xref="taxon:9606"
CDS join(196..771,773..2323)
/codon_start=1
/gene="DKFZp564A1164"
/product="hypothetical protein"
/db_xref="GOA:Q6UWL6"
/db_xref="H-InvDB:HIT000025250.16"
/db_xref="HGNC:HGNC:18816"
/db_xref="InterPro:IPR003598"
/db_xref="InterPro:IPR003599"
/db_xref="InterPro:IPR007110"
/db_xref="InterPro:IPR013098"
/db_xref="InterPro:IPR013162"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR036179"
/db_xref="UniProtKB/Swiss-Prot:Q6UWL6"
/protein_id="CAB66589.2"
/translation="MLRMRVPALLVLLFCFRGRAGPSPHFLQQPEDLVVLLGEEARLP
CALGAYWGLVQWTKSGLALGGQRDLPGWSRYWISGNAANGQHDLHIRPVELEDEASYE
CQATQAGLRSRPAQLHVLVPPEAPQVLGGPSVSLVAGVPANLTCRSRGDARPAPELLW
FRDGVLLDGATFHQTLLKEGTPGSVESTLTLTPFSHDDGATFVCRARSQALPTGRDTA
ITLSLQYPPEVTLSASPHTVQEGEKVIFLCQATAQPPVTGYRWAKGGSPVLGARGPRL
EVVADASFLTEPVSCEVSNAVGSANRSTALDVLFGPILQAKPEPVSVDVGEDASFSCA
WRGNPLPRVTWTRRGGAQVLGSGATLRLPSVGPEDAGDYVCRAEAGLSGLRGGAAEAR
LTVNAPPVVTALHSAPAFLRGPARLQCLVFASPAPDAVVWSWDEGFLEAGSQGRFLVE
TFPAPESRGGLGPGLISVLHISGTQESDFSRSFNCSARNRLGEGGAQASLGRRDLLPT
VRIVAGVAAATTTLLMVITGVALCCWRHSKASASFSEQKNLMRIPGSSDGSSSRGPEE
EETGSREDRGPIVHTDHSDLVLEEEGTLETKDPTNGYYKVRGVSVSLSLGEAPGGGLF
LPPPSPLGPPGTPTFYDFNPHLGMVPPCRLYRARAGYLTTPHPRAFTSYIKPTSFGPP
DLAPGTPPFPYAAFPTPSHPRLQTHV"
BASE COUNT 627 a 867 c 916 g 566 t
ORIGIN
1 gggaactggc aggcgtttca gagcgtcaga ggctgcggat gagcagactt ggaggactcc
61 aggccagaga ctaggctggg cgaagagtcg agcgtgaagg gggctccggg ccagggtgac
121 aggaggcgtg cttgagagga agaagttgac gggaaggcca gtgcgacggc aaatctcgtg
181 aaccttgggg gacgaatgct caggatgcgg gtccccgccc tcctcgtcct cctcttctgc
241 ttcagaggga gagcaggccc gtcgccccat ttcctgcaac agccagagga cctggtggtg
301 ctgctggggg aggaagcccg gctgccgtgt gctctgggcg cctactgggg gctagttcag
361 tggactaaga gtgggctggc cctagggggc caaagggacc taccagggtg gtcccggtac
421 tggatatcag ggaatgcagc caatggccag catgacctcc acattaggcc cgtggagcta
481 gaggatgaag catcatatga atgtcaggct acacaagcag gcctccgctc cagaccagcc
541 caactgcacg tgctggtccc cccagaagcc ccccaggtgc tgggcggccc ctctgtgtct
601 ctggttgctg gagttcctgc gaacctgaca tgtcggagcc gtggggatgc ccgccctgcc
661 cctgaattgc tgtggttccg agatggggtc ctgttggatg gagccacctt ccatcagacc
721 ctgctgaagg aagggacccc tgggtcagtg gagagcacct taaccctgac cccctttcag
781 ccatgatgat ggagccacct ttgtctgccg ggcccggagc caggccctgc ccacaggaag
841 agacacagct atcacactga gcctgcagta ccccccagag gtgactctgt ctgcttcgcc
901 acacactgtg caggagggag agaaggtcat tttcctgtgc caggccacag cccagcctcc
961 tgtcacaggc tacaggtggg caaaaggggg ctctccggtg ctcggggccc gcgggccaag
1021 gttagaggtc gtggcagacg cctcgttcct gactgagccc gtgtcctgcg aggtcagcaa
1081 cgccgtgggt agcgccaacc gcagtactgc gctggatgtg ctgtttgggc cgattctgca
1141 ggcaaagccg gagcccgtgt ccgtggacgt gggggaagac gcttccttca gctgcgcctg
1201 gcgcgggaac ccgcttccac gggtaacctg gacccgccgc ggtggcgcgc aggtgctggg
1261 ctctggagcc acactgcgtc ttccgtcggt ggggcccgag gacgcaggcg actatgtgtg
1321 cagagctgag gctgggctat cgggcctgcg gggcggcgcc gcggaggctc ggctgactgt
1381 gaacgctccc ccagtagtga ccgccctgca ctctgcgcct gccttcctga ggggccctgc
1441 tcgcctccag tgtctggttt tcgcctctcc cgccccagat gccgtggtct ggtcttggga
1501 tgagggcttc ctggaggcgg ggtcgcaggg ccggttcctg gtggagacat tccctgcccc
1561 agagagccgc gggggactgg gtccgggcct gatctctgtg ctacacattt cggggaccca
1621 ggagtctgac tttagcagga gctttaactg cagtgcccgg aaccggctgg gcgagggagg
1681 tgcccaggcc agcctgggcc gtagagactt gctgcccact gtgcggatag tggccggagt
1741 ggccgctgcc accacaactc tccttatggt catcactggg gtggccctct gctgctggcg
1801 ccacagcaag gcctcagcct ctttctccga gcaaaagaac ctgatgcgaa tccctggcag
1861 cagcgacggc tccagttcac gaggtcctga agaagaggag acaggcagcc gcgaggaccg
1921 gggccccatt gtgcacactg accacagtga tctggttctg gaggaggaag ggactctgga
1981 gaccaaggac ccaaccaacg gttactacaa ggtccgagga gtcagtgtga gcctgagcct
2041 tggcgaagcc cctggaggag gtctcttcct gccaccaccc tccccccttg ggcccccagg
2101 gacccctacc ttctatgact tcaacccaca cctgggcatg gtccccccct gcagacttta
2161 cagagccagg gcaggctatc tcaccacacc ccaccctcga gctttcacca gctacatcaa
2221 acccacatcc tttgggcccc cagatctggc ccccgggact ccccccttcc catatgctgc
2281 cttccccaca cctagccacc cgcgtctcca gactcacgtg tgacatcttt ccaatggaag
2341 agtcctggga tctccaactt gccataatgg attgttctga tttctgagga gccaggacaa
2401 gttggcgacc ttactcctcc aaaactgaac acaaggggag ggaaagatca ttacatttgt
2461 caggagcatt tgtatacagt cagctcagcc aaaggagatg ccccaagtgg gagcaacatg
2521 gccacccaat atgcccacct attccccggt gtaaaagaga ttcaagatgg caggtaggcc
2581 ctttgaggag agatggggac agggcagtgg gtgttgggag tttggggccg ggatggaagt
2641 tgtttctagc cactgaaaga agatatttca agatgaccat ctgcattgag aggaaaggta
2701 gcataggata gatgaagatg aagagcatac caggccccac cctggctctc cctgagggga
2761 actttgctcg gccaatggaa atgcagccaa gatggccata tactccctag gaacccaaga
2821 tggccaccat cttgatttta ctttccttaa agacacagaa agacttggac ccaaggagtg
2881 gggatacagt gagaattacc actgttgggg caaaatattg ggataaaaat atttatgttt
2941 aataataaaa aaaagtcaaa aaaaaaaaaa aaaaaa
//