LOCUS AL136643 2978 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp564L023 (from clone DKFZp564L023).
ACCESSION AL136643
VERSION AL136643.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2978)
AUTHORS Wambutt R., Heubner D., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Agowa (Berlin/Germany) within the cDNA sequencing
consortium
of the German Genome Project.
This clone (DKFZp564L023) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp564L023
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..2978
/db_xref="H-InvDB:HIT000025239"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="564 (synonym: hfbr2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp564L023"
/tissue_type="brain"
/note="ubiquilin 1 isoform 1"
/db_xref="taxon:9606"
CDS 279..2048
/codon_start=1
/gene="DKFZp564L023"
/product="hypothetical protein"
/db_xref="GOA:Q9UMX0"
/db_xref="H-InvDB:HIT000025239.18"
/db_xref="HGNC:HGNC:12508"
/db_xref="InterPro:IPR000626"
/db_xref="InterPro:IPR006636"
/db_xref="InterPro:IPR009060"
/db_xref="InterPro:IPR015496"
/db_xref="InterPro:IPR015940"
/db_xref="InterPro:IPR028799"
/db_xref="InterPro:IPR029071"
/db_xref="PDB:2JY5"
/db_xref="PDB:2JY6"
/db_xref="PDB:2KLC"
/db_xref="UniProtKB/Swiss-Prot:Q9UMX0"
/protein_id="CAB66578.1"
/translation="MAESGESGGPPGSQDSAAGAEGAGAPAAAASAEPKIMKVTVKTP
KEKEEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTV
HLVIKTQNRPQDHSAQQTNTAGGNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSS
LGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQL
IQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMY
TDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSA
SSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQ
NMLSAPYMRSMMQSLSQNPDLAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDT
LSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPS
ENTSPTAGTTEPGHQQFIQQMLQALAGVNPQLQNPEVRFQQQLEQLSAMGFLNREANL
QALIATGGDINAAIERLLGSQPS"
BASE COUNT 857 a 685 c 656 g 780 t
ORIGIN
1 ggggggagga agcggtggct gctgcggatg tcggtgtgag cgagcggcgc ctgaacacac
61 ggcggctgcc gagcgcctga cccgggcctg cgccagagcc tgcaccgagc tccggggccc
121 cacacccgct acggtggccc tgcgcccgtt gctactgagg cggcgtgctc tgcattcttc
181 gctgtccagg cctgccggct ctggtgtctg ctggctcctc cttgctcgcc tgctccctcc
241 tgcttgcctg agtcaccgcc gccgccgccg ccacagccat ggccgagagt ggtgaaagcg
301 gcggtcctcc gggctcccag gatagcgccg ccggagccga aggtgctggc gcccccgcgg
361 ccgctgcctc cgcggagccc aaaatcatga aagtcaccgt gaagaccccg aaggaaaagg
421 aggaattcgc cgtgcccgag aatagctccg tccagcagtt taaggaagaa atctctaaac
481 gttttaaatc acatactgac caacttgtgt tgatatttgc tggaaaaatt ttgaaagatc
541 aagatacctt gagtcagcat ggaattcatg atggacttac tgttcacctt gtcattaaaa
601 cacaaaacag gcctcaggat cattcagctc agcaaacaaa tacagctgga ggcaatgtta
661 ctacatcatc aactcctaat agtaactcta catctggttc tgctactagc aacccttttg
721 gtttaggtgg ccttggggga cttgcaggtc tgagtagctt gggtttgaat actaccaact
781 tctctgaact acagagtcag atgcagcgac aacttttgtc taaccctgaa atgatggtcc
841 agatcatgga aaatcccttt gttcagagca tgctctcaaa tcctgacctg atgagacagt
901 taattatggc caatccacaa atgcagcagt tgatacagag aaatccagaa attagtcata
961 tgttgaataa tccagatata atgagacaaa cgttggaact tgccaggaat ccagcaatga
1021 tgcaggagat gatgaggaac caggaccgag ctttgagcaa cctagaaagc atcccagggg
1081 gatataatgc tttaaggcgc atgtacacag atattcagga accaatgctg agtgctgcac
1141 aagagcagtt tggtggtaat ccatttgctt ccttggtgag caatacatcc tctggtgaag
1201 gtagtcaacc ttcccgtaca gaaaatagag atccactacc caatccatgg gctccacaga
1261 cttcccagag ttcatcagct tccagcggca ctgccagcac tgtgggtggc actactggta
1321 gtactgccag tggcacttct gggcagagta ctactgcgcc aaatttggtg cctggagtag
1381 gagctagtat gttcaacaca ccaggaatgc agagcttgtt gcaacaaata actgaaaacc
1441 cacaactgat gcaaaacatg ttgtctgccc cctacatgag aagcatgatg cagtcactaa
1501 gccagaatcc tgaccttgct gcacagatga tgctgaataa tcccctattt gctggaaatc
1561 ctcagcttca agaacaaatg agacaacagc tcccaacttt cctccaacaa atgcagaatc
1621 ctgatacact atcagcaatg tcaaacccta gagcaatgca ggccttgtta cagattcagc
1681 agggtttaca gacattagca acggaagccc cgggcctcat cccagggttt actcctggct
1741 tgggggcatt aggaagcact ggaggctctt cgggaactaa tggatctaac gccacaccta
1801 gtgaaaacac aagtcccaca gcaggaacca ctgaacctgg acatcagcag tttattcagc
1861 agatgctgca ggctcttgct ggagtaaatc ctcagctaca gaatccagaa gtcagatttc
1921 agcaacaact ggaacaactc agtgcaatgg gatttttgaa ccgtgaagca aacttgcaag
1981 ctctaatagc aacaggaggt gatatcaatg cagctattga aaggttactg ggctcccagc
2041 catcatagca gcatttctgt atcttgaaaa aatgtaattt atttttgata acggctctta
2101 aactttaaaa tacctgcttt atttcatttt gactcttgga attctgtgct gttataaaca
2161 aacccaatat gatgcatttt aaggtggagt acagtaagat gtgtgggttt ttctgtattt
2221 ttcttttctg gaacagtggg aattaaggct actgcatgca tcacttctgc atttattgta
2281 attttttaaa aacatcacct tttatagttg ggtgaccaga ttttgtcctg catctgtcca
2341 gtttatttgc tttttaaaca ttagcctatg gtagtaattt atgtagaata aaagcattaa
2401 aaagaagcaa atcatttgca ctctataatt tgtggtacag tattgcttat tgtgactttg
2461 gcatgcattt ttgcaaacaa tgctgtaaga tttatactac tgataatttt gttttatttg
2521 tatacaatat agagtatgca catttgggac tgcatttctg gaaacatact gcaataggct
2581 ctctgagcaa aacacctgta actaaaaaag tgaagataag aaaatactct taaagctgag
2641 tatttcctaa ttgtatagaa tcttacagca tctttgacaa acatctccca gcaaaagtgc
2701 cggttagtca ggtttgttga aaatacagta gaaaagctga ttctggttat ctctttaagg
2761 acaattaatt gtacagacac ataatgtaac attgtctcaa cattcattca cagattgact
2821 gtaaattacc ttaatctttg tgcagactga aggaacactg tagtataccc caaagtgcat
2881 ttgcctagga cttctcagct tctcccatag gtagtttaac aggcattaaa atttgtaatt
2941 gaaatgttgc tttcactcaa aaaaaaaaaa aaaaaaaa
//