LOCUS AL136599 4826 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp564G1816 (from clone DKFZp564G1816);
complete cds.
ACCESSION AL136599
VERSION AL136599.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4826)
AUTHORS Duesterhoeft A., Lauber J., Mewes H.W., Gassenhuber J., Wiemann S.
JOURNAL Submitted (12-MAR-2002) to the INSDC. MIPS, Am Klopferspitz 18a,
D-82152 Martinsried, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Qiagen (Hilden/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp564G1816) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4826
/db_xref="H-InvDB:HIT000025195"
/organism="Homo sapiens"
/map="4"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="564 (synonym: hfbr2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp564G1816"
/tissue_type="brain"
/db_xref="taxon:9606"
CDS 138..3092
/codon_start=1
/gene="DKFZp564G1816"
/product="hypothetical protein"
/note="similarity to KIAA0797 and yeast Smt4p"
/db_xref="GOA:Q9BQF6"
/db_xref="H-InvDB:HIT000025195.18"
/db_xref="HGNC:HGNC:30402"
/db_xref="InterPro:IPR003653"
/db_xref="InterPro:IPR038765"
/db_xref="PDB:3EAY"
/db_xref="UniProtKB/Swiss-Prot:Q9BQF6"
/protein_id="CAB66534.1"
/translation="MDKRKLGRRPSSSEIITEGKRKKSSSDLSEIRKMLNAKPEDVHV
QSPLSKFRSSERWTLPLQWERSLRNKVISLDHKNKKHIRGCPVTSRSSPERIPRVILT
NVLGTELGRKYIRTPPVTEGSLSDTDNLQSEQLSSSSDGSLESYQNLNPHKSCYLSER
GSQRSKTVDDNSAKQTAHNKEKRRKDDGISLLISDTQPEDLNSGSRGCDHLEQESRNK
DVKYSDSKVELTLISRKTKRRLRNNLPDSQYCTSLDKSTEQTKKQEDDSTISTEFERP
SENYHQDPKLPEEITTKPTKSDFTKLSSLNSQELTLSNATKSASAGSTTETVEYSNSI
DIVGISSLVEKDENELNTIEKPILRGHNEGNQSLISAEPIVVSSDEEGPVEHKSSEIL
KLQSKQDRETTNENESTSESALLELPLITCESVQMSSELCPYNPVMENISSIMPSNEM
DLQLDFIFTSVYIGKIKGASKGCVTITKKYIKIPFQVSLNEISLLVDTTHLKRFGLWK
SKDDNHSKRSHAILFFWVSSDYLQEIQTQLEHSVLSQQSKSSEFIFLELHNPVSQREE
LKLKDIMTEISIISGELELSYPLSWVQAFPLFQNLSSKESSFIHYYCVSTCSFPAGVA
VAEEMKLKSVSQPSNTDAAKPTYTFLQKQSSGCYSLSITSNPDEEWREVRHTGLVQKL
IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSS
FFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLA
VICFPWLEEAVYEDFPQTVSQQSQAQQSQSDNKTIDNDLRTTSTLSLSAEDSQSTESN
MSVPKKMCKRPCILILDSLKAASVRNTVQNLREYLEVEWEVKLKTHRQFSKTNMVDLC
PKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELIL
KLHLQQQKGSSS"
regulatory 4737..4742
/regulatory_class="polyA_signal_sequence"
polyA_site 4756
BASE COUNT 1602 a 811 c 897 g 1516 t
ORIGIN
1 gggtcgaggt cgacggtatc gataagtttt tttttttttt tttttttttt ttttcctttc
61 ccctccccct ccctctccaa gccggagggg tcctgaggtg acagcgcctg caactgaaat
121 ttcagcagcg ggagaagatg gacaagagaa agctcgggcg acggccatct tcatccgaaa
181 tcatcacaga aggaaaaagg aaaaagtcat cttctgattt atcggagata agaaagatgt
241 taaatgcaaa accagaggat gtccatgttc aatcaccact gtccaaattc agaagctcag
301 aacgctggac tctccctttg cagtgggaaa gaagcctaag gaataaagtc atctctctag
361 accataaaaa taaaaaacat atccgagggt gtcctgttac ttccaggtca tcaccagaaa
421 ggatacccag agttatattg acgaatgtcc tgggaacgga gttaggaaga aaatacataa
481 ggaccccacc tgtaactgag ggaagtttga gtgatacaga caacttgcaa tcagagcaac
541 tttcttcatc atctgatggc agcctagaat cttatcaaaa tctaaaccct cacaagagct
601 gttatttatc tgaaaggggc tcacaacgaa gtaagacagt agatgacaat tctgcaaagc
661 agactgcgca caataaagaa aaacgaagaa aggatgatgg catttctctt ttaatatctg
721 atactcagcc tgaagacctt aacagtggaa gtagaggttg tgatcatctc gaacaggaaa
781 gcagaaacaa ggatgttaaa tattctgatt caaaagtgga actcactctg atttccagga
841 agacaaagag aaggcttaga aataatttac ctgattctca atattgtact tctttggata
901 agtcaacaga acagacaaaa aaacaagaag atgactcaac aatatccact gagtttgaaa
961 ggccaagtga aaactatcat caggatccaa aactgcctga agaaattaca actaaaccta
1021 caaaaagtga ttttactaag ctatcctcac ttaacagtca ggagttgact ttgagtaatg
1081 ccaccaaaag tgcctctgcc ggttcaacca ctgaaaccgt tgagtactct aattccattg
1141 atattgtggg gatttcttcc ctggttgaga aggatgagaa tgagttgaat accatagaaa
1201 agcctattct aagaggacat aatgaaggga accaatcact gatctcagct gaaccaattg
1261 ttgtttccag tgatgaagaa ggacctgttg aacataaaag ttcagaaatt cttaagttac
1321 aatctaagca agaccgtgag acaactaatg aaaatgagag tacttctgaa tcagcattgt
1381 tagaactacc attgattaca tgtgaatctg tacagatgtc atctgaatta tgcccatata
1441 atcctgtcat ggagaacatt tccagtatta tgcctagtaa tgagatggat ctacaactgg
1501 attttatatt tacttctgtt tatattggta aaataaaagg agcttctaaa ggttgtgtta
1561 caatcacaaa aaaatatatt aagatcccat ttcaagtgtc cctgaatgag atttcattgc
1621 tagtggatac cacacattta aagcggtttg ggttatggaa aagtaaggat gataatcaca
1681 gtaaaaggag tcatgctatt cttttcttct gggtctcttc agattatctt caagagattc
1741 agacccaatt agaacactct gtattaagcc agcaatcaaa atctagtgaa ttcattttcc
1801 ttgaactaca caatcctgtt tcacagagag aagaattgaa gctgaaagat attatgacgg
1861 aaataagtat aatcagtgga gaattagagc tttcttaccc gttgtcttgg gttcaggcat
1921 ttcctttgtt tcagaacctc tcttcaaaag aaagttcttt tattcattat tactgtgttt
1981 caacttgttc tttccctgct ggtgttgctg ttgctgaaga aatgaagctg aaatcagtat
2041 ctcagccctc aaacacagat gcggccaagc ctacttacac cttcctgcag aagcaaagta
2101 gcggttgcta ctccctttct attacatcta atccagatga agaatggcgg gaagtcaggc
2161 acactggact tgttcagaag ttgattgtat atcctccacc acctactaag gggggattgg
2221 gagtaactaa tgaagatctg gagtgtttag aagaaggaga gtttcttaat gatgtaatca
2281 ttgattttta ccttaagtat cttatattgg agaaggcatc agatgaactt gttgaacgaa
2341 gtcacatttt tagtagcttt ttctataaat gcttgacaag aaaggaaaat aatttaacag
2401 aagataatcc aaatctttca atggcacaga gaagacataa aagagtaaga acatggactc
2461 gtcacataaa catttttaat aaagattaca tctttgtacc tgtaaatgag tcgtctcact
2521 ggtatctcgc agtcatttgt tttccatggt tagaagaagc tgtgtatgaa gattttccac
2581 aaactgtatc ccagcagtcc caggctcagc agtcccaaag tgacaacaaa acaatagata
2641 atgatctacg tactacttcg acactgtctt tgagtgcaga ggattcccaa agtaccgagt
2701 cgaatatgtc agtaccaaag aaaatgtgta aaaggccatg tattcttata ctagactcct
2761 tgaaagctgc ttctgtacga aacacagttc agaatttacg agagtattta gaggtagagt
2821 gggaagttaa actaaaaact catcgtcaat tcagcaaaac aaacatggtg gatctatgcc
2881 ctaaagttcc taaacaggac aatagcagtg attgtggagt atatttattg cagtatgtgg
2941 aaagcttctt caaggatcct attgttaact ttgaacttcc aattcatttg gagaagtggt
3001 ttcctcgtca tgtaataaag accaaacggg aagatattcg agagctcatc ttgaaacttc
3061 atttacagca acagaagggc agcagtagct agttaatctg tacaaacatg acacagatgt
3121 tctctaagat tactggaaag ccccttacca gcatttgtgt tagccagctc acagagaaga
3181 aaataacttg cagtagtttt ataataagtc attggaacat tatttaaaat atgtaggaca
3241 cattattaga attgttggga tctcatagat ggaatgggaa tgggggtgat atagataaac
3301 ttactagata taaattaaaa ttttataaat atttcatatt tttctgagta aatatgattg
3361 gattatgcaa cagcatatgt aatatgggaa tgttttgtag ataataaaac ttacatgatc
3421 tgtacttcca cgtgactggg tgctgagggg agttaaagcc tccctggtgc cagccccagt
3481 gcttgtcaaa tttgctgaca ggtcacatca tattgtaatt ctattctttg cagctcaagc
3541 atgcagtatg aatactgtgt attttttaaa aaaataattt agtatcaagg cttcagaaaa
3601 tgccatttac ggcatccctt ctgtatgtaa caaaaagaca ttcataatgt taggaagatg
3661 ataaaaattc gctcttttaa agtgcagctt attattctca attgctaaat acgattactc
3721 tgcttttttt ttttcatttc ttttgatgtc atatgtgagt atcttataat ttagttcatt
3781 tgttcagggt aaaatttgaa acaaaaaatt ttacctgtgc aaaatagttt tttaaaaatt
3841 atacatgtag ctcaacttga ggtactgcta tataaatatt cactcacatt atcacggaat
3901 ttatgtatag tttctctaat atagaagata aaattggtgt cctcataact ttaacaaaga
3961 aaaccctcag tcctatttat taatgggtag aattaaatat ataattttat agctcagttt
4021 acccagtatt catctgcaaa gccagattgc tctcattgct tttatatttt taaattgtag
4081 cttttagaga cctatgatcc tcatggaact taatttttta ttaaatattc aggtaacagt
4141 tctgaattca tgtgataatg gtggcattat atatgattaa acacttcaga actttctaat
4201 gttatcagga gtattttgag ggagatatga ttatattgta ttttctcaga taagaaaaat
4261 gttttttaac aatattattt taatctgttt taagcatctc ttagatttac attataacta
4321 cataaagcag tgaagcaaag gcaaattaag ataaagctag aaagtctgaa cattttattt
4381 caaaatcata cgaatcgggg tcagttaagc ctcagtattc ttagcttttg ttgattttgg
4441 cactatcttt atattattaa atatatttgt tgtttggata tttcatataa agatggctat
4501 aattacatat ttcattccca atttgtgtgt gttggggggt acttttaaag gtgactattg
4561 ttttgtacat ctaattttgg gaaaccaagt ctataagaca tcttgtgatt tcttaatgtt
4621 tttgtttgta tgtttttcaa agatatcact gtcctttatc atgttttgaa gattgtttaa
4681 aattcatttt cctaaattaa tgtgcaagta atgttttgag gatatcggtg ttttatatta
4741 aacatatttc caattcaaaa aaaaaaaaaa aaaaacttat cgataccgtc gacctcgatg
4801 atgatgatga tgatgatgat gtcgac
//