LOCUS AL136579 3871 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp761D0724 (from clone DKFZp761D0724).
ACCESSION AL136579
VERSION AL136579.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3871)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp761D0724) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp761D0724
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..3871
/db_xref="H-InvDB:HIT000025175"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="761 (synonym: hamy2). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp761D0724"
/tissue_type="amygdala"
/note="similar to P-Rex1 protein, differentially splice"
/db_xref="taxon:9606"
CDS 90..2960
/codon_start=1
/gene="DKFZp761D0724"
/product="hypothetical protein"
/db_xref="GOA:Q8TCU6"
/db_xref="H-InvDB:HIT000025175.18"
/db_xref="HGNC:HGNC:32594"
/db_xref="InterPro:IPR000219"
/db_xref="InterPro:IPR000591"
/db_xref="InterPro:IPR001331"
/db_xref="InterPro:IPR001478"
/db_xref="InterPro:IPR001849"
/db_xref="InterPro:IPR011993"
/db_xref="InterPro:IPR035899"
/db_xref="InterPro:IPR036034"
/db_xref="InterPro:IPR036388"
/db_xref="InterPro:IPR036390"
/db_xref="PDB:3QIK"
/db_xref="PDB:4YON"
/db_xref="PDB:5D27"
/db_xref="PDB:5D3V"
/db_xref="PDB:5D3W"
/db_xref="PDB:5D3X"
/db_xref="PDB:5D3Y"
/db_xref="PDB:5FI0"
/db_xref="PDB:5FI1"
/db_xref="UniProtKB/Swiss-Prot:Q8TCU6"
/protein_id="CAB66514.1"
/translation="MGLEQIIKIPDQPDTLCFQIRGAAPPYVYAVGRGSEAMAAGLCA
GQCILKVNGSNVMNDGAPEVLEHFQAFRSRREEALGLYQWIYHTHEDAQEARASQEAS
TEDPSGEQAQEEDQADSAFPLLSLGPRLSLCEDSPMVTLTVDNVHLEHGVVYEYVSTA
GVRCHVLEKIVEPRGCFGLTAKILEAFAANDSVFVENCRRLMALSSVIVTMPHFEFRN
ICDTKLESIGQRIACYQEFAAQLKSRVSPPFKQAPLEPHPLCGLDFCPTNCHINLMEV
SYPKTTPSVGRSFSIRFGRKPSLIGLDPEQGHLNPMSYTQHCITTMAAPSWKCLPAAE
GDPQGQGLHDGSFGPASGTLGQEDRGLSFLLKQEDREIQDAYLQLFTKLDVALKEMKQ
YVTQINRLLSTITEPTSGGSCDASLAEEASSLPLVSEESEMDRSDHGGIKKVCFKVAE
EDQEDSGHDTMSYRDSYSECNSNRDSVLSYTSVRSNSSYLGSDEMGSGDELPCDMRIP
SDKQDKLHGCLEHLFNQVDSINALLKGPVMSRAFEETKHFPMNHSLQEFKQKEECTIR
GRSLIQISIQEDPWNLPNSIKTLVDNIQRYVEDGKNQLLLALLKCTDTELQLRRDAIF
CQALVAAVCTFSEQLLAALGYRYNNNGEYEESSRDASRKWLEQVAATGVLLHCQSLLS
PATVKEERTMLEDIWVTLSELDNVTFSFKQLDENYVANTNVFYHIEGSRQALKVIFYL
DSYHFSKLPSRLEGGASLRLHTALFTKVLENVEGLPSPGSQAAEDLQQDINAQSLEKV
QQYYRKLRAFYLERSNLPTDASTTAVKIDQLIRPINALDELCRLMKSFVHPKPGAAGS
VGAGLIPISSELCYRLGACQMVMCGTGMQRSTLSVSLEQAAILARSHGLLPKCIMQAT
DIMRKQGPRVEILAKNLRVKDQMPQGAPRLYRLCQPPVDGDL"
BASE COUNT 862 a 1153 c 1114 g 742 t
ORIGIN
1 ggaagagggc tccaggcagg ggaagcagct agggcagagg ccctgaagtg ggaccgtgtc
61 tggcgcattg gaagagcaga aagaagctga tggggctgga gcagatcatc aaaatccccg
121 accagccgga cacactgtgc ttccagattc gtggagctgc cccaccgtac gtctatgctg
181 tggggagagg ctctgaggcc atggctgcag ggctctgtgc tggtcagtgc attctgaagg
241 tcaatggcag caacgtgatg aacgatggtg cccctgaggt cctggagcac ttccaggcat
301 tccggagtcg gcgcgaagag gccctgggcc tgtaccagtg gatctaccac acccatgagg
361 atgcccagga agcacgagcc agtcaggagg cctccactga ggaccccagt ggcgagcagg
421 cccaggagga agaccaggct gattcagcct tcccactgct gtccctgggt ccccggctga
481 gcctgtgtga ggacagcccc atggtcaccc tgactgtgga caacgtgcac ctggaacacg
541 gcgtggtgta tgagtatgtg agcacggcag gcgtcaggtg ccatgtgctg gagaagatcg
601 tggagccccg cggctgcttc ggcctcaccg ccaagatcct cgaggccttt gctgccaatg
661 acagcgtctt cgtggagaac tgcaggcggc tcatggccct gagcagcgtc atcgtgacca
721 tgccccactt tgagttccgc aacatctgtg acaccaagct ggagagcatt ggccagagga
781 ttgcctgcta ccaggagttt gcagcccaac tgaagagcag ggtcagccca cccttcaaac
841 aagcccccct ggagccccac ccgctgtgtg gcctggactt ctgccccacc aattgccaca
901 tcaacctcat ggaagtgtcc taccccaaga ccaccccctc agtgggcagg tccttcagca
961 tccgctttgg acgcaaaccc tccctcatcg gccttgaccc ggagcaaggc cacctgaacc
1021 ccatgtcgta cacccagcac tgcatcacca ccatggctgc tccctcctgg aagtgcttgc
1081 ctgctgcaga gggtgatccc caaggccagg gtctccatga tggcagcttc gggccagcca
1141 gtgggaccct tggtcaggaa gaccggggcc tcagcttcct actcaagcag gaggaccgtg
1201 agatccagga tgcctacctg cagctcttca ccaagctgga tgtggccctg aaggagatga
1261 agcaatatgt cacccagatc aacaggctgc tgtccaccat cacagagccc acctcgggtg
1321 ggtcctgcga cgcatccttg gctgaggagg cctcctccct gcccctggtc agtgaagaga
1381 gcgagatgga caggagtgac catgggggca tcaagaaggt gtgcttcaag gtggccgagg
1441 aggaccagga ggactcaggc cacgacacca tgagttatcg cgactcctac agcgagtgta
1501 acagcaatcg agactcggtc ctgtcctaca ccagcgtgag aagtaacagc tcctacttgg
1561 gcagcgacga gatggggtct ggagatgagc tgccctgtga catgcggatc ccatctgaca
1621 agcaggacaa gcttcatggc tgcctggagc acctctttaa ccaggtggac tccatcaatg
1681 ctctcctcaa ggggccagtc atgagccggg ctttcgaaga gaccaagcat ttccctatga
1741 accacagctt acaagagttt aaacagaaag aagagtgtac aatccgtggc cggagcctga
1801 tccagattag catccaggag gacccctgga acctccccaa ctccatcaag accctggtgg
1861 acaacattca gagatatgtg gaagatggga agaaccagct gctcctggcc ttgctgaagt
1921 gcacagacac ggagctgcag ctgcgcagag acgcgatctt ctgccaggcc ctggtggccg
1981 ccgtgtgcac cttctccgag cagctgctgg cggccctggg ctaccgctac aacaacaatg
2041 gcgagtacga ggagagcagc cgcgacgcca gccgcaagtg gctggagcag gtggcggcca
2101 cgggcgtcct gctgcactgc cagtccctgc tctcgccagc cacagtgaag gaggaacgga
2161 ccatgctgga ggacatctgg gtgacgctgt cagagctgga caatgtcacc ttctccttta
2221 agcagctgga cgagaactat gtggccaaca ccaacgtctt ctaccacatt gagggcagcc
2281 ggcaggcgct gaaggtcatc ttctacctcg acagctacca cttctccaag ctgccctccc
2341 gcctggaggg tggggccagc ctgaggctgc acacagcgct gttcacgaaa gtgctggaga
2401 acgtggaggg gctgccttct ccaggcagcc aggccgcgga ggatttgcag caggacatca
2461 acgcgcagtc cctggagaaa gttcagcagt attaccgcaa actcagggca ttttacctgg
2521 agcggtctaa cctgcccacg gatgccagca ccacggcggt aaagatagac cagctgatcc
2581 gccccatcaa tgccctggat gagctctgcc gcctcatgaa gtcctttgtc cacccaaagc
2641 ctggtgctgc tgggagtgtg ggcgctggcc tcatccccat ctcctcggag ctctgctacc
2701 gcctgggggc ctgccagatg gtcatgtgtg gcacaggcat gcagaggagc accctgagcg
2761 tgtccctgga gcaggcggcc atcttggcac ggagccacgg gttgctgccc aagtgcatca
2821 tgcaggccac ggacatcatg cggaagcagg gcccaagggt ggagattctg gccaaaaacc
2881 tgcgagtcaa ggaccagatg ccccagggtg ctccgcgcct ctaccgcctc tgccagccgc
2941 cggtggatgg ggacctctga acacccaaat gccccacgct gggccgcggc ctctggagct
3001 gggatttggg aggacacagc aggcagcgct ggccttctcc agggatggcc caaggcttcc
3061 gcagccgccc gttccgggac ctgcccagcg tcctccctgc ctccttccgg gacaagcctg
3121 gccaccctcg ctgtgatgac gagctggctg attggccctg ggccggccca ttcttcacac
3181 gcctgccaga agctggaggg gtgctggaga cccatagagc tgatgggagc agctggtgcc
3241 tggccttcgg ctcctgcgtc cccagaaccc aagggaacgt catggaggcc acatggggcc
3301 acccggctcc ctcgggatgg ctccgcctgc acttttgaaa ccccggtttc cttcaacgtc
3361 cacattccag gtgaccacac gtgtctcctc ctcctcatct tagcttccag gttcacccta
3421 accctgtact aacctgcttg gtggacttgg aaaagacttg gctctgtcgg gaaaggagag
3481 acggggcctc catcacgcct gttaccagag gatccccgag agccacacca gctctggaca
3541 tcaccgcccc tggaactggg gccaccagcc ctgggcacga gatttgctct gactttattt
3601 atatggcatg aaatctctgg tttattttgg gattttttgt tgttggtgtt gtcaaagttt
3661 gttttttcta aagttgtgtg attatatatt tgacatttta catttcaaag aaaggtatgt
3721 tgtctaacag gggaccaaca gaaggtagta ttgacaactg ttcctgcttc tactaaaaaa
3781 aaaagagcac aaaagaaaaa ctaaattatt gaaaaattaa aaaatgtcat tgtttcctgt
3841 ttgttaaaaa agaaaaaaaa aaaaaaaaaa a
//