LOCUS AL136570 3342 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp761G2023 (from clone DKFZp761G2023).
ACCESSION AL136570
VERSION AL136570.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3342)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp761G2023) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp761G2023
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..3342
/db_xref="H-InvDB:HIT000025166"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="761 (synonym: hamy2). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp761G2023"
/tissue_type="amygdala"
/note="LIM homeobox protein 6 isoform 1"
/db_xref="taxon:9606"
CDS 53..1144
/codon_start=1
/gene="DKFZp761G2023"
/product="hypothetical protein"
/db_xref="GOA:Q9UPM6"
/db_xref="H-InvDB:HIT000025166.17"
/db_xref="HGNC:HGNC:21735"
/db_xref="InterPro:IPR001356"
/db_xref="InterPro:IPR001781"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR017970"
/db_xref="UniProtKB/Swiss-Prot:Q9UPM6"
/protein_id="CAB66505.1"
/translation="MAQPGSGCKATTRCLEGTAPPAMAQSDAEALAGALDKDEGQASP
CTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRT
SLRQQNSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACF
SCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKP
AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKK
HTPQHPVPPSGAPPSRLPSALSDDIHYTPFSSPERARMVTLHGYIESQVQCGQVHCRL
PYTAPPVHLKADMDGPLSNRGEKVILFQY"
BASE COUNT 806 a 962 c 852 g 722 t
ORIGIN
1 gcccgagggc tgccggctgc cggccgaggg cggccccgcc accgaccagg tgatggccca
61 gccagggtcc ggctgcaaag cgaccacccg ctgtcttgaa gggaccgcgc cgcccgccat
121 ggctcagtct gacgccgagg ccctggcagg agctctggac aaggacgagg gtcaggcctc
181 cccatgtacg cccagcacgc catctgtctg ctcaccgccc tctgccgcct cctccgtgcc
241 gtctgcaggc aagaacatct gctccagctg cggcctcgag atcctggacc gatatctgct
301 caaggtcaac aacctcatct ggcacgtgcg gtgcctcgag tgctccgtgt gtcgcacgtc
361 gctgaggcag cagaacagct gctacatcaa gaacaaggag atcttctgca agatggacta
421 cttcagccga ttcgggacca agtgtgcccg gtgcggccga cagatctacg ccagcgactg
481 ggtgcggaga gctcgcggca acgcctacca cctggcctgc ttcgcctgct tctcgtgcaa
541 gcgccagctg tccactggtg aggagttcgg cctggtcgag gagaaggtgc tctgccgcat
601 ccactacgac accatgattg agaacctcaa gagggccgcc gagaacggga acggcctcac
661 gttggagggg gcagtgccct cggaacagga cagtcaaccc aagccggcca agcgcgcgcg
721 gacgtccttc accgcggaac agctgcaggt tatgcaggcg cagttcgcgc aggacaacaa
781 ccccgacgct cagacgctgc agaagctggc ggacatgacg ggcctcagcc ggagagtcat
841 ccaggtgtgg tttcaaaact gccgggcgcg tcataaaaag cacacgccgc aacacccagt
901 gccgccctcg ggggcgcccc cgtcccgcct tccctccgcc ctgtccgacg acatccacta
961 caccccgttc agcagccccg agcgggcgcg catggtcacc ctgcacggct acattgagag
1021 tcaggtacag tgcgggcagg tgcactgccg gctgccttac accgcacccc ccgtccacct
1081 caaagccgat atggatgggc cgctctccaa ccggggtgag aaggtcatcc tttttcagta
1141 ctaacgctgc cggcacttcc gcatctgccc gtgggcgccc cacagctgcc cctcagccgc
1201 tgagatccag tgtccaagct gcggccagga gtccacccac ctccgcatcc acccccgtcc
1261 gccatcctgc ccaccaccag gtcggttccc gaggcctggc ctttccctct cctgctgaga
1321 accagaaccc accaggagca ccacagagtc ctcctcttgg aaggcagaac tccctgaaat
1381 ctggaatcag ggtggaaaca gcctgttttt cccatttaaa caggagtcct cttcaacttc
1441 agctgattac aataacaaaa ggcggaattg aattgtgcga tgccaacggc cttctcattt
1501 acaggttttt ttcccccaca ttggccttta tttactactt ccttggaacc atctctgaat
1561 tctgaatagc tgacaacccc caatgttatc cactctgttg cttttgtctg gaaaactcta
1621 cagtgtttgt gggatgtccc caaaggaaag ctatgttcta attttatcat ttccatctgt
1681 ctggttatgt caagttaatt cagaaagaga agagacagtg accaaccctg agaggcctaa
1741 tagggcagag atggaggcct gcccagacta ggaggcagcg gggatagaca gggaatgggg
1801 agaagaaaga cccccattgg tttggaaatc aaggagaggg cggtgacata ttggaccaga
1861 agaggcacta gccattttaa ggagaggaaa gagaaaactc tggggtcagg gagagaccct
1921 acccccacct aattatccag catatatgta agaaacatag cagcgatggt attcgatctg
1981 tgccatgact cttctgaatg tttggacagg ttagagttgg ggacccctgt tggccacttg
2041 ttgacctctc atagtggtgc ttgggccagg tcttctcaat ggaaggggaa tcccttatag
2101 gggagaggga acagagccca gtgaaatggc agtcagaatg ttaaccctgg atccatctct
2161 aagtagagag agggtgccca ttgcctaggt gagtgtgcca agctcaggat tccaactggt
2221 gcctctgagc ttcccaatca atacttcctg gagccagccc cacccacccc tgagaacaga
2281 ggtcagacac agctgcgtaa catccatcct gctacaactc ttccacccca aacaaaaggg
2341 ctcaggctac acacgaccat gatttatgtt ttcaggggat gcccatttgt cccaagctta
2401 tcctgtaatt ctagaattac ctggtgtcct gatgcatttt ccactagagg ttgctaatca
2461 gcatgtttta gcccaagtcc accttcctgc tgtggttaac ctgttatgtt gcttttggaa
2521 ggagactcta agacagggaa agcaagttca tggtacatac gcagccattg tctctgtttt
2581 tacccatggc agacattgct aatcaatggc agctctattt cactgagtct ggataaggtt
2641 tcagagttca aatgcttgac gttggcactt aacatgaaag cctataggtc attcttgctc
2701 tgggatctac aggcagggta ggcacaggtg cagcctaaga agggaacctg cttcctctcc
2761 cttccaaaga cagtgacagc tgactgaggg caaagagcag gcaccactca gaacgtggtg
2821 agtacagctc agctcagcac tcagtcagtg gtaacttgtg cccagccctg tgctaggcgc
2881 tgacattaac aggagcaacc agggcccaat tcctggcctt ggagctcaaa tctttccttt
2941 gatttttgct cctgatcatc aaggccccag tggcaaccat gtggtaagtg gccaaccaag
3001 ccctacccag ggtcacccaa cacactctgc cttgagcctc tcctcagggt ctattccttg
3061 cgtggattat gtggccgtag catgttacag ttcaaacatg tctccactac cctgttaaga
3121 gcagcctggg aacgtacagg ccatcaagac tatttattta aatacaaaaa aaggggaaaa
3181 cacacacacg gaaaaaaaat tgtaagcact ttttttgtaa aaccaatgtc tgttttgtta
3241 catacctttc atgtcgtgct ttgtaaatgt cttatttgtg taataaagtt aatgcaagta
3301 gaagtgctgg cactgaaatc cagaaaaaaa aaaaaaaaaa aa
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