LOCUS AL133600 3683 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp564C047 (from clone DKFZp564C047).
ACCESSION AL133600
VERSION AL133600.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3683)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (20-JAN-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp564C047) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp564C047
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..3683
/db_xref="H-InvDB:HIT000025067"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="564 (synonym: hfbr2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp564C047"
/tissue_type="brain"
/note="STAM2 signal transducing adaptor molecule 2A"
/db_xref="taxon:9606"
CDS 113..1690
/codon_start=1
/gene="DKFZp564C047"
/product="hypothetical protein"
/db_xref="GOA:O75886"
/db_xref="H-InvDB:HIT000025067.17"
/db_xref="HGNC:HGNC:11358"
/db_xref="InterPro:IPR001452"
/db_xref="InterPro:IPR002014"
/db_xref="InterPro:IPR003903"
/db_xref="InterPro:IPR008942"
/db_xref="InterPro:IPR035675"
/db_xref="InterPro:IPR036028"
/db_xref="PDB:1X2Q"
/db_xref="PDB:1X5B"
/db_xref="PDB:2L0T"
/db_xref="PDB:5CRV"
/db_xref="PDB:5IXF"
/db_xref="UniProtKB/Swiss-Prot:O75886"
/protein_id="CAB63735.1"
/translation="MPLFTANPFEQDVEKATNEYNTTEDWSLIMDICDKVGSTPNGAK
DCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFRLGVCSRDFATEVRAVIKNKAH
PKVCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGITFPPAGSQTVSAAAKNGTS
SNKNKEDEDIAKAIELSLQEQKQQHTETKSLYPSSEIQLNNKVARKVRALYDFEAVED
NELTFKHGEIIIVLDDSDANWWKGENHRGIGLFPSDFVTTNLNIETEVAAVDKLNVID
DDVEEIKKSEPEPVYIDEDKMDRALQVLQSIDPTDSKPDSQDLLDLEDICQQMGPMID
EKLEEIDRKHSELSELNVKVLEALELYNKLVNEAPVYSVYSKLHPPAHYPPASSGVPM
QTYPVQSHGGNYMGQSIHQVTVAQSYSLGPDQIGPLRSLPPNVNSSVTAQPAQTSYLS
TGQDTVSNPTYMNQNSNLQSATGTTAYTQQMGMSVDMSSYQNTTSNLPQLAGFPVTVP
AHPVAQQHTNYHQQPLL"
BASE COUNT 1189 a 664 c 694 g 1136 t
ORIGIN
1 gggggaggcc gaagcggagc ggtctaggga gccgcggccg cgggtcaccc ggcgggtagc
61 agttgctgag tgtcagctag acagcagcga ctagggctcg ggcgccggcg agatgccctt
121 gttcaccgcc aaccccttcg agcaagacgt ggaaaaagcc acgaatgagt acaacactac
181 agaagattgg agtcttatta tggacatatg tgacaaagtt ggaagtactc ctaatggagc
241 gaaagattgc ctaaaagcca taatgaaaag ggtaaatcat aaggttccac atgttgctct
301 gcaagcacta actcttcttg gggcttgtgt ggcaaactgt ggaaagatat ttcgtttagg
361 agtatgttcc cgtgattttg caacagaagt acgtgctgtg attaaaaata aggcacatcc
421 taaagtatgt gaaaaactga aatctttaat ggtggagtgg tcagaagaat ttcagaagga
481 ccctcagttt agtctgatat ctgcaactat taaatctatg aaagaagaag gaattacttt
541 tcctccagca ggttctcaga ctgtctcagc tgctgccaag aatggtacgt catcgaacaa
601 aaacaaagag gatgaagaca tagctaaagc tattgaatta tcgctgcaag aacagaaaca
661 gcaacacaca gaaacaaaat ccttatatcc atcttcagaa attcagttaa ataataaggt
721 tgcacggaaa gtgagagctt tatatgattt tgaagctgtt gaggacaatg aactcacctt
781 taaacatggt gaaataatta ttgttttgga tgacagtgat gccaattggt ggaaaggaga
841 aaatcacaga ggaataggac ttttcccatc cgattttgta acaactaatt taaacataga
901 gactgaggta gcggctgtgg acaaattgaa tgtaattgat gatgatgtgg aggaaattaa
961 gaaatcagag cctgagcctg tttatataga tgaggataag atggatagag ccctgcaggt
1021 acttcagagt atagatccaa cagattcaaa accagactcc caagaccttt tggatttaga
1081 agatatctgc caacagatgg gtccaatgat agatgaaaaa cttgaagaaa ttgataggaa
1141 gcattcagaa ttgtctgaat tgaatgttaa agtcctggaa gctctggaac tatataacaa
1201 attggtgaat gaagcaccag tgtactcagt ctattcaaag ctccaccctc cagcacatta
1261 cccacctgca tcatctgggg ttccaatgca gacatatcca gttcaatcac atggtggaaa
1321 ctatatgggt cagagcattc accaagtaac tgttgcccaa agctatagcc taggacccga
1381 tcaaattggt ccactgagat ctctgcctcc aaatgtgaat tcctcagtga cagcacagcc
1441 tgctcaaact tcatatttaa gcactggaca agacactgtt tccaatccta cttatatgaa
1501 ccagaactct aacctacagt cagctactgg tacaactgct tacacacagc aaatggggat
1561 gtctgtggat atgtcatctt atcagaacac tacttccaat ttgcctcaac tggcaggctt
1621 tccggtgaca gttccagctc atccagttgc acagcagcac acaaattacc atcagcagcc
1681 tctcctttag aaacaaatca agcattttct tgaaagcctt cataagtgta ttattcagtc
1741 cttgtgatac caacctgaaa atattaaaac ttttttccct ctcaactcaa aaggaccatg
1801 aataaataaa gcacaaaaac ctctcttatt ctacaaggcc ataaaaggtt tttttttttt
1861 tttttttttc agtccagttt gtttgaagtc aatcttttca tcagaggcag cttaaagatg
1921 ctttcagtta gttttgtctt actttcagat ttctctacat aaatctagat actcattaag
1981 tagccttatg acaaacagta tgagatactt atgacaaact cgctctgtca cccaggctgg
2041 agtgcagtag catgatcgac agagtgagtt tgtcaaaagt atctcatact tataaacaat
2101 atgagatagg aggattaaaa tattatttta aagaaaccac tgtttccccc taaaatgtca
2161 taagagcact gaagaacttg aaatattttt ttcagagttt ctcacacact ttaaaagtct
2221 aacttttttg tgtgtaagca tttagcttgc cagcatattt ctttttggct ccttaaattg
2281 cggttgtgtt tgcagtattg tcacttttgc tctcactgtt atgttgaata ataattagca
2341 tataattgtc tacagaagca agagcaatct ggaaggaaca aaaatgtttt ctgtgattaa
2401 cagtgaagac cttgtaaatg cagatgtgtg ataaagcatt tagtcagtcc cccaaacagt
2461 catgccaact gtgaaggaat gtcccacaaa acatttccat tccctgagga aaaacatttt
2521 ctttcctaca tgtatctctg gtatttagaa ttgtcactaa taaccttttc aagtgatttt
2581 ggctattctc taatgaagat atggtccatt tgtttttctt cctgcaatgt ggtgtgcaga
2641 gatgctgcat atccttttta tgggattgcg tgtgaatttg aaccatgaga cattcctaat
2701 aatttgttgt gagatatacc aagcatggat gataagtgtg tttttagtgg tgtgttgttt
2761 ttttaaagag gtgattcaag taccgttgct aagctgtcaa cataccaagc tgttgaaaaa
2821 attgaccatt tctttcagaa gtaattctca gcctgtagaa taatagcagg tgaagacttc
2881 atagaaggcg acagatagat agggaggcta ttgaagcagt ttttctgaag cctgcatttt
2941 gagttagttt atagtgctaa tagattctat ataactgtga gagtttggta gtaaaccagt
3001 agggattgtt ttctctccta aaaatttgca cactacttca ttgtctacca actttttaca
3061 tattggaaaa tagaaattgc gaatacatac atgtatggaa acatattcag attgggaaaa
3121 acaatggaca ttagttttta aaaagttacg tggaagcaag atttctatat ttgttttttt
3181 aaaggaagca gtcattcttt ctactaaatc catttcaagc tagttctctg aaaattttgc
3241 catttatcta cagaaatttg attataaata tgttcctttt tcaaagaaac tttattctag
3301 aacaaaatag tctatatggt acttgatcta catttaagtg gaaaaattag cagtatttga
3361 aagctcagtt tatgtcattg tcttaacttc agatacaaat aactgaacag aaagttttaa
3421 cctttaatat ctcatgttct gttttttatt cagtattttc ctttatgcta attcaattat
3481 atacttctga atggcacctt actttttgga aacaaatctt ctgttattta caaaataata
3541 atttttaaaa aacatttaaa aaaaatccaa agctgctctc gataatagtc aacatttgca
3601 tatatatgga atttcttact ttttttctcc caaactctat ttaataaact tattttaatg
3661 tttgtgaaaa aaaaaaaaaa aaa
//