LOCUS AL133035 2537 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp434G171 (from clone DKFZp434G171).
ACCESSION AL133035
VERSION AL133035.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2537)
AUTHORS Poustka A., Klein M., Mewes H.W., Gassenhuber J., Wiemann S.
JOURNAL Submitted (15-NOV-1999) to the INSDC. MIPS, Am Klopferspitz 18a,
D-82152 Martinsried, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp434G171) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://www.mips.biochem.mpg.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..2537
/db_xref="H-InvDB:HIT000024938"
/organism="Homo sapiens"
/map="55.5 cR from top of Chr1 linkage group ?"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="434 (synonym: htes3). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp434G171"
/tissue_type="testis"
/db_xref="taxon:9606"
CDS <1..604
/codon_start=2
/gene="DKFZp434G171"
/product="hypothetical protein"
/note="similarity to zyxin"
/db_xref="GOA:Q8WUP2"
/db_xref="H-InvDB:HIT000024938.19"
/db_xref="HGNC:HGNC:24686"
/db_xref="InterPro:IPR001781"
/db_xref="PDB:2K9U"
/db_xref="PDB:2W0P"
/db_xref="PDB:4P3W"
/db_xref="UniProtKB/Swiss-Prot:Q8WUP2"
/protein_id="CAB61365.1"
/translation="VEKGASTDICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQ
LAGQSFYQKDGRPLCEPCYQDTLERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARC
IGDESFALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDGKDAFKIECMGRNFHENCY
RCEDCRILLSVEPTDQGCYPLNNHLFCKPCHVKRSAAGCC"
regulatory 2508..2513
/regulatory_class="polyA_signal_sequence"
polyA_site 2527
BASE COUNT 583 a 716 c 686 g 552 t
ORIGIN
1 ggttgagaaa ggggcatcca cagacatctg tgccttctgc cacaagaccg tgtccccccg
61 agagctggct gtggaggcca tgaagaggca gtaccatgcc cagtgcttca cgtgccgcac
121 ctgccgccgc cagctggctg ggcagagctt ctaccagaag gatgggcgac ccctctgcga
181 accctgctac caggacacac tggagaggtg cggcaagtgt ggcgaggtgg tccgggacca
241 catcatcagg gccctgggcc aggccttcca cccctcctgc ttcacgtgtg tgacctgcgc
301 ccggtgcatt ggggatgaga gctttgccct gggcagccag aacgaggtgt actgcctgga
361 cgacttctac aggaaattcg cccccgtctg cagcatctgt gaaaatccca tcatccctcg
421 ggatgggaaa gatgccttca aaatcgaatg catgggaaga aacttccatg aaaattgcta
481 caggtgtgag gactgcagga tcctcctgtc tgtcgagccc acggaccaag gctgctaccc
541 cctgaacaac catctcttct gcaagccatg ccatgtgaag cggagtgctg cggggtgctg
601 ctgagagtgc ccgctgggca gtgaacagac cactagcccc ggctggggcc cttccctgac
661 ttggtttccc ttcctaacct gctcttgcac actttccttc tgagcctcca tggagaccag
721 cctgcaagcc ggcccagcct gtccaggata cagtggggct gagcaccccc aggccttcca
781 ctcctctacc ctctgggcac cagaaggctc ctggaccatg agcttcaccc ccagaattcc
841 ctgctgaccc tgccccactt ccagggaaaa gctgggggag gttggacccc tctcactgac
901 tagctgtctg gtaggggtgc taggaccagc ctcgcctgtg gggttgagct gtttgaggac
961 aaactccaag gtcccttaaa aagtgccttt tagaggctgg gcatggtggc tcacgcttgt
1021 aatcccagca ctttgggagg ccaaggtggg tggatcacct gaggtcagga gttcaagacc
1081 agcctggcca acatggtgaa accctgtctc tactaaaaat acaaaaatta gccaggcatg
1141 gtagcaggtg cctgtaatcc cagctactgg ggaaagctga ggcaggagaa ttgcttcaat
1201 ctggaaggca gaggttgcag tgagattgca ccattgcatt ccagcctggg caacaagagg
1261 gaaactccgt ctcaaaaaaa aaaaaagtgc cttttaggcc ggatgtggtg gctcatgcct
1321 gtaatcccag cactttggga ggccaaggca ggcagatcac ttgaggtcag gagtttgaga
1381 ccagcctggc caacacggca aaaccccgtt tctactaaaa atacaaaaat tagctgggtg
1441 tggtggcgtg cgcctgtaat cccagctact caggaggctg aggcaggagc attgcttgaa
1501 cccgggaggc agaggttgca gtgagctgag atggcaccac tgcactccag cctgggagac
1561 acagcgagac tctgtctcca aaaaaaaaag tgctttttga aaatgttgag gttgaaatga
1621 tgggaaccaa cattctttgg atttagtggg gagcataata gcaaacaccc ccttggttcg
1681 cacatgtaca ggaatgggac ccagttgggg cacagccatg gacttccccg ccctggaatg
1741 tgtggtgcaa agtggggcca gggcccagac ccaagaggag agggtggtcc gcagacaccc
1801 cgggatgtca gcatcccccg acctgccttc tggcggcacc tcccgggtgc tgtgttgagt
1861 cagcaggcat ggggtgagag cctggtatat gctgggaaca gggtgcaggg gccaagcgtt
1921 cctccttcag ccttgacttg ggccatgcac cccctctccc ccaaacacaa acaagcactt
1981 ctccagtatg gtgccaggac aggtgtccct tcagtcctct ggttatgacc tcaagtccta
2041 cttgggccct gcagcccagc ctgtgttgta acctctgcgt cctcaagacc acacctggaa
2101 gattcttctt ccctttgaag gagaatcatc attgttgctt tatcacttct aagacatttt
2161 gtacggcacg gacaagttaa acagaatgtg cttccctccc tggggtctca cacgctccca
2221 cgagaatgcc acaggggccg tgcactgggc aggcttctct gtagaacccc aggggcttcg
2281 gcccagacca cagcgtcttg ccctgagcct agagcaggga gtcccgaact tctgcattca
2341 cagaccacct ccacaattgt tataaccaaa ggcctcctgt tctgttattt cacttaaatc
2401 aacatgctat tttgttttca ctcacttctg actttagcct cgtgctgagc cgtgtatcca
2461 tgcagtcatg ttcacgtgct agttatgttt ttcttcttac acatgaaaat aaatgcataa
2521 gtgttagaaa aaaaaaa
//