LOCUS AL117557 1431 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp564D177 (from clone DKFZp564D177).
ACCESSION AL117557
VERSION AL117557.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1431)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (20-JAN-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp564D177) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp564D177
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..1431
/db_xref="H-InvDB:HIT000024719"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="564 (synonym: hfbr2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp564D177"
/tissue_type="brain"
/note="nipsnap homolog 3A"
/db_xref="taxon:9606"
CDS 50..793
/codon_start=1
/gene="DKFZp564D177"
/product="hypothetical protein"
/db_xref="GOA:Q9UFN0"
/db_xref="H-InvDB:HIT000024719.15"
/db_xref="HGNC:HGNC:23619"
/db_xref="InterPro:IPR011008"
/db_xref="InterPro:IPR012577"
/db_xref="UniProtKB/Swiss-Prot:Q9UFN0"
/protein_id="CAB55992.2"
/translation="MLVLRSALTRALASRTLAPQMCSSFATGPRQYDGIFYEFRSYYL
KPSKMNEFLENFEKNAHLRTAHSELVGYWSVEFGGRMNTVFHIWKYDNFAHRTEVRKA
LAKDKEWQEQFLIPNLALIDKQESEITYLVPWCKLEKPPKEGVYELATFQMKPGGPAL
WGDAFKRAVHAHVNLGYTKLVGVFHTEYGALNRVHVLWWNESADSRAAGRHKSHEDPR
VVAAVRESVNYLVSQQNMLLIPTSFSPLK"
BASE COUNT 412 a 262 c 291 g 466 t
ORIGIN
1 ggggagaaag gacacggctg gctgcttttc tcagcgccga agccgcgcca tgctcgtcct
61 cagaagcgcc ctgactcggg cgctggcctc acggacgctg gcgcctcaga tgtgctcatc
121 ttttgctacg ggacccagac aatacgatgg aatattctat gaatttcgtt cttattacct
181 taagccctca aagatgaatg agttcctgga aaattttgag aaaaacgctc atcttcggac
241 agctcactct gaattggttg gatactggag tgtagaattt ggaggcagaa tgaatacagt
301 gtttcatatt tggaagtatg ataattttgc tcatcgaact gaagttcgga aagccttggc
361 caaagataag gaatggcaag aacaattcct cattccaaat ttggctctca ttgataaaca
421 agagagtgag attacttatc tggtaccatg gtgcaaatta gaaaaacctc caaaagaagg
481 agtctatgaa ctggccactt ttcagatgaa acctggtggg ccagctctgt ggggtgatgc
541 atttaaaagg gcagttcatg ctcatgtcaa tctaggctac acaaaactag ttggagtgtt
601 ccacacagag tacggagcac tcaacagagt tcatgttctt tggtggaatg agagtgcaga
661 tagtcgtgca gctgggagac ataagtccca tgaggatccc agagttgtgg cagctgttcg
721 ggaaagtgtc aactacctag tatctcagca gaatatgctt ctgattccta catcgttttc
781 accactgaaa tagttttcta ctgaaataca aaacatttca ttaactgcta taggatctgt
841 ctgctaatgg tgcttaaatt ctcccaagag gttctcactt ttatttgaag gaggtggtaa
901 gttaatttgc tatgtttctt gcattatgaa ggctacatct gtgctttgta agtaccactt
961 caaaaaatag ttctgtttac tttctgcatg gtatttcagt gtctgtcata cattaaaaat
1021 acttgtcact gttttaagat cttgactctt catttgtttc agaatagctc ttctactgta
1081 ttctgacaac tctttgcttt atagcatttt gttgtattca aatgataatg gtagcatttc
1141 catgcttgtg acagcatttt taagttatta atatatttta tcaacctttc catcatgtct
1201 gttttcctgg ttttttttgg ttgttttttg accagtaaaa tttattttgt aataccaaat
1261 aggatttaag aaaattaacg tatttcttta ctatggaaaa ccacattgtc atttgtgaca
1321 tcatctatat taaatatggt tttcacatta gttatttgtc acttacttgg aaaatgatgc
1381 tgttaggtcc tggtattaaa aatctagaaa agacaaaaaa aaaaaaaaaa a
//