LOCUS AL110281 4432 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp434K213 (from clone DKFZp434K213).
ACCESSION AL110281
VERSION AL110281.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4432)
AUTHORS Wambutt R., Heubner D., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Agowa (Berlin/Germany) within the cDNA sequencing
consortium
of the German Genome Project.
This clone (DKFZp434K213) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp434K213
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4432
/db_xref="H-InvDB:HIT000024544"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="434 (synonym: htes3). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp434K213"
/tissue_type="testis"
/note="chromodomain helicase DNA binding protein 5,
N-terminus truncated, differentially spliced"
/db_xref="taxon:9606"
CDS <3..3182
/codon_start=1
/gene="DKFZp434K213"
/product="hypothetical protein"
/db_xref="GOA:Q659F1"
/db_xref="H-InvDB:HIT000024544.17"
/db_xref="InterPro:IPR000330"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR002464"
/db_xref="InterPro:IPR009462"
/db_xref="InterPro:IPR009463"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR027417"
/db_xref="InterPro:IPR028727"
/db_xref="InterPro:IPR038718"
/db_xref="UniProtKB/TrEMBL:Q659F1"
/protein_id="CAH56404.1"
/translation="YDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKK
GKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVV
TYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAIL
GSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLT
PERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVEL
SQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLP
NGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRLLIFSQMTKMLDLLEDFLEYEGYKYE
RIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHN
DIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSM
TKQELDDILKFGTEELFKDDVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTP
PGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDG
VEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQED
QEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVG
GNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRH
LCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPE
GPEGKKPGEVISSDPNTPVPASPAHLLPAPLGLPDKMEAQLGYMDEKDPGAQKPRQPL
EVQALPAALDRVESEDKHESPASKERAREERPEETEKAPPSPEQLPRASCSVTQAGVQ
WRHLGSWEPLSPRLKRPSHLSFLNRGGAS"
BASE COUNT 1082 a 1295 c 1311 g 744 t
ORIGIN
1 gctatgacca gtgcacctgg gagatcgatg acatcgacat cccctactac gacaacctca
61 agcaggccta ctggggccac agggagctga tgctgggaga agacaccagg ctgcccaaga
121 ggctgctcaa gaagggcaag aagctgaggg acgacaagca ggagaagccg ccggacacgc
181 ccattgtgga ccccacggtc aagttcgaca agcagccatg gtacatcgac tccacaggcg
241 gcacactgca cccgtaccag ctggagggcc tcaactggct gcgcttctct tgggcccagg
301 gcactgacac catcctggcc gatgagatgg gtctgggcaa gacggtgcag accatcgtgt
361 tcctttactc cctctacaag gagggccact ccaaagggcc ctacctggtt agcgcgcccc
421 tctccaccat catcaactgg gaacgcgagt ttgagatgtg ggcgcccgac ttctacgtgg
481 tcacctacac gggggacaag gagagccgct cggtgattcg ggagaacgag ttttcctttg
541 aggacaacgc cattcggagt gggaagaagg tattccgtat gaagaaagaa gtgcagatca
601 aattccacgt gctgctcacc tcctatgagc tcatcaccat cgaccaggcc atcctgggct
661 ccatcgagtg ggcctgcctg gtggtagatg aggcccaccg cctcaagaac aaccagtcca
721 agttttttag ggtcttaaac agctacaaga ttgattacaa gctgctgctg acagggaccc
781 cccttcagaa caacctggag gagctgttcc atctcctcaa cttcctgact ccagagaggt
841 tcaacaacct ggagggcttc ctggaggagt ttgctgacat ctccaaggaa gaccagatca
901 agaagctgca tgacctgctg gggccgcaca tgctcaggcg gctcaaggct gacgtgttca
961 agaacatgcc ggccaagacc gagctcattg tccgggtgga gctgagccag atgcagaaga
1021 agtactacaa gttcatcctc acacggaact ttgaggcact gaactccaag gggggcggga
1081 accaagtatc gctgctcaac atcatgatgg acctgaaaaa gtgctgcaac cacccctacc
1141 tcttccctgt ggctgccgtg gaggcccctg tcttgcccaa tggctcctac gatggaagct
1201 ccctggtcaa gtcttcaggg aagctcatgc tgctacagaa gatgctgaag aaactgcggg
1261 atgaggggca ccgtctgctc atcttctccc agatgaccaa gatgctggac ctcctggagg
1321 acttcctgga gtacgaaggc tacaagtatg agcggattga tggtggcatc accgggggcc
1381 tccggcagga ggcaatcgac agattcaatg cccccggggc ccagcagttc tgcttcctcc
1441 tctcaacccg ggcaggtggt ctgggcatca acctggccac ggcggacact gtcatcatct
1501 acgactcgga ctggaacccg cacaatgaca tccaggcctt cagccgcgcc caccgcatcg
1561 gccagaacaa gaaggtgatg atctaccgct tcgtgactcg ggcctcggtg gaggagcgca
1621 tcacgcaggt ggccaagcgc aagatgatgc tcacccacct ggtggtgcgg cccggcctcg
1681 gctccaagtc ggggtccatg accaagcagg agctggacga catcctcaag ttcggcacgg
1741 aggaactctt caaggacgac gtggagggca tgatgtctca gggccagagg ccggtcacac
1801 ccatccctga tgtccagtcc tccaaagggg ggaacttggc cgccagtgca aagaagaagc
1861 acggtagcac cccgccaggt gacaacaagg acgtggagga cagcagtgtg atccactatg
1921 acgatgcggc catctccaag ctgctggacc ggaaccagga cgctacagat gacacggagc
1981 tacagaacat gaacgagtac ctgagctcct tcaaggtggc gcagtacgtg gtgcgcgagg
2041 aggacggcgt ggaggaggtg gagcgggaaa tcatcaagca ggaggagaac gtggaccccg
2101 actactggga gaagctgctg cggcaccact atgagcagca gcaggaggac ctggcccgca
2161 acctgggcaa gggcaagcgc atccgcaagc aggtcaacta caacgatgcc tcccaggagg
2221 accaggagtg gcaggatgag ctctctgata accagtcaga atattccatt ggctctgagg
2281 atgaggatga ggactttgaa gagaggccgg aagggcagag tggacgacga caatcccgga
2341 ggcagctgaa gagtgacagg gacaagcccc tgcccccgct tctcgcccga gttggtggca
2401 acatcgaggt gctgggcttc aatgcccgac agcggaaggc ctttctgaac gccatcatgc
2461 gctggggcat gcccccgcag gacgccttca actcccactg gctggtgcgg gaccttcgag
2521 ggaagagcga gaaggagttt agagcctatg tgtccctctt catgcggcac ctgtgtgagc
2581 cgggggcgga tggtgcagag accttcgcag acggcgtgcc ccgggagggc ctctccaggc
2641 agcacgtgct gacccgcatc ggggtcatgt cactagttag gaagaaggtt caggagtttg
2701 agcatgtcaa cgggaagtac agcaccccag acttgatccc tgaggggccc gaggggaaga
2761 agccgggcga ggtgatctcc tcggacccca acacaccagt gcccgccagc cctgcccacc
2821 tcctgccagc cccgctgggc ctgccagaca aaatggaagc ccagctgggc tacatggatg
2881 agaaagaccc cggggcacag aagccaaggc agcccctgga agtccaggcc cttccagccg
2941 ccttggatag agtggagagt gaggacaagc acgagagccc agccagcaag gagagagccc
3001 gagaggagcg gccagaggag acggagaagg ccccgccctc cccggagcag ctgccgagag
3061 cgtcttgctc tgtcactcag gctggagtgc agtggcgcca tctcggctca tgggagcctt
3121 tatctcctcg gctcaagcga ccctcccacc tcagcttcct gaacagagga ggtgcttcct
3181 gagaaggaga agatcctgga caagctggag ctgagcttga tccacagcag aggggacagt
3241 tccgaactca ggccagatga caccaaggct gaggagaagg agcccattga aacacagcaa
3301 aatggtgaca aagaggaaga tgacgagggg aagaaggagg acaagaaggg gaaattcaag
3361 ttcatgttca acatcgcgga cgggggcttc acggagttgc acacgctgtg gcagaacgag
3421 gagcgggctg ctgtatcctc tgggaaaatc tacgacatct ggcaccggcg ccatgactac
3481 tggctgctgg cgggcatcgt gacgcacggc tacgcccgct ggcaggacat ccagaatgac
3541 ccacggtaca tgatcctcaa cgagcccttc aagtctgagg tccacaaggg caactacctg
3601 gagatgaaga acaagttcct ggcccgcagg tttaagctgc tggagcaggc gttggtcatt
3661 gaggagcagc tccggagggc cgcgtacctg aacatgacgc aggaccccaa ccaccccgcc
3721 atggccctca acgcccgcct ggctgaagtg gagtgcctcg ccgagagcca ccagcacctg
3781 tccaaggagt cccttgctgg gaacaagcct gccaatgccg tcctgcacaa ggtcctgaac
3841 cagctggagg agctgctgag cgacatgaag gccgacgtga cccggctgcc atccatgctg
3901 tcccgcatcc ccccggtggc cgcccggctg cagatgtcgg agcgcagcat cctgagccgc
3961 ctgaccaacc gcgccgggga ccccaccatc cagcagatat ctagccgtcc tcgagacttc
4021 cctgtgttgc agcgctcatt tccagctgag ccacgcctgc cgggccacct gcccgaccca
4081 catgggagag aaaagctgcc acctttttag gagccagcgc caccttggga caaaaaggga
4141 aacctagtaa tgccatcaca tggaggacga ggcccagctc agctgggcca gagcccagaa
4201 gtgccacctc atcataattc aagtgttctt ccacacagcg ttgcccccac aaccacgccg
4261 gacgtgcccc ctcgccacct tttccagacg acttcttaga agagatttca tttatttgta
4321 catcttttgc actttcctat tgaagacttg aacacgtttg tcttgataaa agttggatga
4381 cgtatggaag attcgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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