LOCUS AL110210 3250 bp mRNA linear HUM 15-OCT-2008 DEFINITION Homo sapiens mRNA; cDNA DKFZp564F0923 (from clone DKFZp564F0923); partial cds. ACCESSION AL110210 VERSION AL110210.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3250) AUTHORS Wambutt R., Heubner D., Mewes H.W., Gassenhuber J., Wiemann S. JOURNAL Submitted (15-AUG-1999) to the INSDC. MIPS, Am Klopferspitz 18a, D-82152 Martinsried, GERMANY COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de; sequenced by AGOWA (Berlin/Germany) within the cDNA sequencing consortium of the German Genome Project. This clone (DKFZp564F0923) is available at the RZPD in Berlin. Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6, 14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de Further information about the clone and the sequencing project is available at http://www.mips.biochem.mpg.de/proj/cDNA/ FEATURES Location/Qualifiers source 1..3250 /db_xref="H-InvDB:HIT000024475" /organism="Homo sapiens" /mol_type="mRNA" /dev_stage="fetal" /clone_lib="564 (synonym: hfbr2). Vector pAMP1; host Xl-2blue; sites NotI + SalI" /clone="DKFZp564F0923" /tissue_type="brain" /db_xref="taxon:9606" CDS <1..2974 /codon_start=2 /gene="DKFZp564F0923" /product="hypothetical protein" /note="strong similarity to rat protein tyrosine phosphatase TD14" /db_xref="GOA:Q9H3S7" /db_xref="H-InvDB:HIT000024475.16" /db_xref="HGNC:HGNC:14406" /db_xref="InterPro:IPR000242" /db_xref="InterPro:IPR000387" /db_xref="InterPro:IPR003595" /db_xref="InterPro:IPR004328" /db_xref="InterPro:IPR016130" /db_xref="InterPro:IPR025304" /db_xref="InterPro:IPR029021" /db_xref="InterPro:IPR038499" /db_xref="PDB:3RAU" /db_xref="PDB:5CRU" /db_xref="PDB:5CRV" /db_xref="PDB:5LM1" /db_xref="PDB:5LM2" /db_xref="PDB:5MJY" /db_xref="PDB:5MJZ" /db_xref="PDB:5MK0" /db_xref="PDB:5MK1" /db_xref="PDB:5MK2" /db_xref="PDB:5MK3" /db_xref="UniProtKB/Swiss-Prot:Q9H3S7" /protein_id="CAB53676.1" /translation="GDQKWNSTLQTLVASYEAYEDLMKKSQEGRDFYADLESKVAALL ERTQSTCQAREAARQQLLDRELKKKPPPRPTAPKPLLPRREESEAVEAGDPPEELRSL PPDMVAGPRLPDTFLGSATPLHFPPSPFPSSTGPGPHYLSGPLPPGTYSGPTQLIQPR APGPHAMPVAPGPALYPAPAYTPELGLVPRSSPQHGVVSSPYVGVGPAPPVAGLPSAP PPQFSGPELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPPPPCFPVPPPQPLPTPY TYPAGAKQPIPAQHHFSSGIPTGFPAPRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQH PHLFPPQAPGLLPPQSPYPYAPQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPS PGPPQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPPPAPSPGPGP VPPRPPAAEPPPCLRRGAAAADLLSSSPESQHGGTQSPGGGQPLLQPTKVDAAEGRRP QALRLIERDPYEHPERLRQLQQELEAFRGQLGDVGALDTVWRELQDAQEHDARGRSIA IARCYSLKNRHQDVMPYDSNRVVLRSGKDDYINASCVEGLSPYCPPLVATQAPLPGTA ADFWLMVHEQKVSVIVMLVSEAEMEKQKVARYFPTERGQPMVHGALSLALSSVRSTET HVERVLSLQFRDQSLKRSLVHLHFPTWPELGLPDSPSNLLRFIQEVHAHYLHQRPLHT PIIVHCSSGVGRTGAFALLYAAVQEVEAGNGIPELPQLVRRMRQQRKHMLQEKLHLRF CYEAVVRHVEQVLQRHGVPPPCKPLASASISQKNHLPQDSQDLVLGGDVPISSIQATI AKLSIRPPGGLESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKE EPPVPEAPSSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKHNFLQAHNGQGLRATR PSDDPLSLLDPLWTLNKT" regulatory 3204..3209 /regulatory_class="polyA_signal_sequence" polyA_site 3230 BASE COUNT 600 a 1238 c 842 g 570 t ORIGIN 1 gggggaccaa aagtggaact ccacgctgca gaccctggtg gcctcgtatg aagcctatga 61 ggacctgatg aagaagtcgc aggagggcag ggacttctac gcagatctgg agagcaaggt 121 ggctgctctg ctggagcgca cgcagtccac ctgccaggcc cgcgaggctg cccgccagca 181 gctcctggac agggagctga agaagaagcc gccgccacgg cccacagccc caaagccgct 241 gctgccccgc agggaggaga gtgaggcagt ggaagcagga gacccccctg aggagctgcg 301 cagcctcccc cctgacatgg tggctggccc acgactgcct gacaccttcc tgggaagtgc 361 caccccgctc cactttcctc ccagcccctt ccccagctcc acaggcccag gaccccacta 421 tctctcaggc cccttgcccc ctggtaccta ctcgggcccc acccagctga tacagcccag 481 ggccccaggg ccccatgcaa tgcccgtagc acctgggcct gccctctacc cagcccctgc 541 ctacacaccg gagctgggcc tcgtgccccg atcctcccca cagcatggcg tggtgagcag 601 tccctatgtg ggggtagggc cggccccacc agttgcaggt ctcccctcgg ccccacctcc 661 tcaattctca ggccccgagt tggccatggc ggttcggcca gccaccacca cagtagatag 721 catccaggcg cccatcccca gccacacagc cccacggcca aaccccaccc ctgctcctcc 781 cccgccctgc ttccctgtgc ccccaccgca gccactgccc acgccttaca cctaccctgc 841 aggggctaag caacccatcc cagcacagca ccacttctct tctgggatcc ccacaggttt 901 tccagcccca aggattgggc cccagcccca gccccatcct cagccccatc cttcacaagc 961 gtttgggcct cagcccccac agcagcccct tccactccag catccacatc tcttcccacc 1021 ccaggcccca ggactcctac ccccacaatc cccctacccc tatgcccctc agcctggggt 1081 cctggggcag ccgccacccc ccctacacac ccagctctac ccaggtcccg ctcaagaccc 1141 tctgccagcc cactcagggg ctctgccttt ccccagccct gggccccctc agcctcccca 1201 tcccccactg gcatatggtc ctgccccttc taccagaccc atgggccccc aggcagcccc 1261 tcttaccatt cgagggccct cgtctgctgg ccagtccacc cctagtcccc acctggtgcc 1321 tccacctgcc ccatctccag ggcctggtcc ggtaccccct cgccccccag cagcagaacc 1381 acccccttgc ctgcgccgag gcgccgcagc tgcagacctg ctctcctcca gcccggagag 1441 ccagcatggc ggcactcagt ctcctggggg tgggcagccc ctgctgcagc ccaccaaggt 1501 ggatgcagct gagggtcgtc ggccgcaggc cctgcggctg attgagcggg acccctatga 1561 gcatcctgag aggctgcggc agttgcagca ggagctggag gcctttcggg gtcagctggg 1621 ggatgtggga gctctggaca ctgtctggcg agagctgcaa gatgcgcagg aacatgatgc 1681 ccgaggccgt tccatcgcca ttgcccgctg ctactcactg aagaaccggc accaggatgt 1741 catgccctat gacagtaacc gtgtggtgct gcgctcaggc aaggatgact acatcaatgc 1801 cagctgcgtg gaggggctct ccccatactg ccccccgcta gtggcaaccc aggccccact 1861 gcctggcaca gctgctgact tctggctcat ggtccatgag cagaaagtgt cagtcattgt 1921 catgctggtt tctgaggctg agatggagaa gcaaaaagtg gcacgctact tccccaccga 1981 gaggggccag cccatggtgc acggtgccct gagcctggca ttgagcagcg tccgcagcac 2041 cgaaacccat gtggagcgcg tgctgagcct gcagttccga gaccagagcc tcaagcgctc 2101 tcttgtgcac ctgcacttcc ccacttggcc tgagttaggc ctgcccgaca gccccagcaa 2161 cttgctgcgc ttcatccagg aggtgcacgc acattacctg catcagcggc cgctgcacac 2221 gcccatcatt gtgcactgca gctctggtgt gggccgcacg ggagcctttg cactgctcta 2281 tgcagctgtg caggaggtgg aggctgggaa cggaatccct gagctgcctc agctggtgcg 2341 gcgcatgcgg cagcagagaa agcacatgct gcaggagaag ctgcacctca ggttctgcta 2401 tgaggcagtg gtgagacacg tggagcaggt cctgcagcgc catggtgtgc ctcctccatg 2461 caaacccttg gccagtgcaa gcatcagcca gaagaaccac cttcctcagg actcccagga 2521 cctggtcctc ggtggggatg tgcccatcag ctccatccag gccaccattg ccaagctcag 2581 cattcggcct cctggggggt tggagtcccc ggttgccagc ttgccaggcc ctgcagagcc 2641 cccaggcctc ccgccagcca gcctcccaga gtctacccca atcccatctt cctccccacc 2701 ccccctttcc tccccactac ctgaggctcc ccagcctaag gaggagccgc cagtgcctga 2761 agcccccagc tcggggcccc cctcctcctc cctggaattg ctggcctcct tgaccccaga 2821 ggccttctcc ctggacagct ccctgcgggg caaacagcgg atgagcaagc ataactttct 2881 gcaggcccat aacgggcaag ggctgcgggc cacccggccc tctgacgacc ccctcagcct 2941 tctggatcca ctctggacac tcaacaagac ctgaacaggt tttgcctacc tggtccttac 3001 actacatcat catcatctca tgcccacctg cccacaccca gcagagcttc tcagtgggca 3061 cagtctctta ctcccatttc tgctgccttt ggccctgcct ggcccagcct gcacccctgt 3121 ggggtggaaa tgtactgcag gctctgggtc aggttctgct cctttatggg acccgacatt 3181 tttcagctct ttgctattga aataataaac caccctgttc tgtggcccgt aaaaaaaaaa 3241 aaaaaaaaaa //