LOCUS AL110209 2722 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp564A0122 (from clone DKFZp564A0122);
partial cds.
ACCESSION AL110209
VERSION AL110209.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2722)
AUTHORS Wambutt R., Heubner D., Mewes H.W., Gassenhuber J., Wiemann S.
JOURNAL Submitted (15-AUG-1999) to the INSDC. MIPS, Am Klopferspitz 18a,
D-82152 Martinsried, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by AGOWA (Berlin/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp564A0122) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://www.mips.biochem.mpg.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..2722
/db_xref="H-InvDB:HIT000024474"
/organism="Homo sapiens"
/map="313.3 cR from top of Chr16 linkage group"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="564 (synonym: hfbr2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp564A0122"
/tissue_type="brain"
/db_xref="taxon:9606"
CDS 485..1303
/codon_start=1
/gene="DKFZp564A0122"
/product="hypothetical protein"
/note="LCAT-like protein (LLPL)"
/db_xref="GOA:Q8NCC3"
/db_xref="H-InvDB:HIT000024474.14"
/db_xref="HGNC:HGNC:17163"
/db_xref="InterPro:IPR003386"
/db_xref="InterPro:IPR029058"
/db_xref="PDB:4X90"
/db_xref="PDB:4X91"
/db_xref="PDB:4X92"
/db_xref="PDB:4X93"
/db_xref="PDB:4X94"
/db_xref="PDB:4X95"
/db_xref="PDB:4X97"
/db_xref="PDB:6MTW"
/db_xref="UniProtKB/Swiss-Prot:Q8NCC3"
/protein_id="CAB53675.1"
/translation="MVESLVGWGYTRGEDVRGAPYDWRRAPNENGPYFLALREMIEEM
YQLYGGPVVLVAHSMGNMYTLYFLQRQPQAWKDKYIRAFVSLGAPWGGVAKTLRVLAS
GDNNRIPVIGPLKIREQQRSAVSTSWLLPYNYTWSPEKVFVQTPTINYTLRDYRKFFQ
DIGFEDGWLMRQDTEGLVEATMPPGVQLHCLYGTGVPTPDSFYYESFPDRDPKICFGD
GDGTVNLKSALQCQAWQSRQEHQVLLQELPGSEHIEMLANATTLAYLKRVLLGP"
regulatory 2681..2686
/regulatory_class="polyA_signal_sequence"
polyA_site 2703
BASE COUNT 525 a 816 c 799 g 582 t
ORIGIN
1 acagaagggg gagagcccag agagctgaac ctgcatcccg gacctgcggc gaccgtcgta
61 caccatgggc ctccacctcc gcccctaccg tgtggggctg ctcccggatg gcctcctgtt
121 cctcttgctg ctgctaatgc tgctcgcgga cccagcgctc ccggccggac gtcacccccc
181 agtggtgctg gtccctggtg atttgggtaa ccaactggaa gccaagctgg actagccgac
241 agtggtgcac tacctctgct ccaagaagac cgaaagctac ttcacaatct ggctgaacct
301 ggaactgctg ctgcctgtca tcattgactg ctggattgac aatatcaggc tggtttacaa
361 caaaacatcc agggccaccc agtttcctga tggtgtggat gtacgtgtcc ctggctttgg
421 gaagaccttc tcactggagt tcctggaccc cagcaaaagc agcgtgggtt cctatttcca
481 caccatggtg gagagccttg tgggctgggg ctacacacgg ggtgaggatg tccgaggggc
541 tccctatgac tggcgccgag ccccaaatga aaacgggccc tacttcctgg ccctccgcga
601 gatgatcgag gagatgtacc agctgtatgg gggccccgtg gtgctggttg cccacagtat
661 gggcaacatg tacacgctct actttctgca gcggcagccg caggcctgga aggacaagta
721 tatccgggcc ttcgtgtcac tgggtgcgcc ctgggggggc gtggccaaga ccctgcgcgt
781 cctggcttca ggagacaaca accggatccc agtcatcggg cccctgaaga tccgggagca
841 gcagcggtca gctgtctcca ccagctggct gctgccctac aactacacat ggtcacctga
901 gaaggtgttc gtgcagacac ccacaatcaa ctacacactg cgggactacc gcaagttctt
961 ccaggacatc ggctttgaag atggctggct catgcggcag gacacagaag ggctggtgga
1021 agccacgatg ccacctggcg tgcagctgca ctgcctctat ggtactggcg tccccacacc
1081 agactccttc tactatgaga gcttccctga ccgtgaccct aaaatctgct ttggtgacgg
1141 cgatggtact gtgaacttga agagtgccct gcagtgccag gcctggcaga gccgccagga
1201 gcaccaagtg ttgctgcagg agctgccagg cagcgagcac atcgagatgc tggccaacgc
1261 caccaccctg gcctatctga aacgtgtgct ccttgggccc tgactcctgt gccacaggac
1321 tcctgtggct cggccgtgga cctgctgttg gcctctgggg ctgtcatggc ccacgcgttt
1381 tgcaaagttt gtgactcacc attcaaggcc ccgagtcttg gactgtgaag catctgccat
1441 ggggaagtgc tgtttgttat cctttctctg tggcagtgaa gaaggaagaa atgagagtct
1501 agactcaagg gacactggat ggcaagaatg ctgctgatgg tggaactgct gtgaccttag
1561 gactggctcc acagggtgga ctggctgggc cctggtccca gtccctgcct ggggccatgt
1621 gtccccccta ttcctgtggg cttttcatac ttgcctactg ggccctggcc ccgcagcctt
1681 cctatgaggg atgttactgg gctgtggtcc tgtacccaga ggtcccaggg atcggctcct
1741 ggcccctcgg gtgacccttc ccacacacca gccacagata ggcctgccac tggtcatggg
1801 tagctagagc tgctggcttc cctgtggctt agctggtggc cagcctgact ggcttcctgg
1861 gcgagcctag tagctcctgc aggcaggggc agtttgttgc gttcttcgtg gttcccaggc
1921 cctgggacat ctcactccac tcctacctcc cttaccacca ggagcattca agctctggat
1981 tgggcagcag atgtgccccc agtcccgcag gctgtgttcc aggggccctg atttcctcgg
2041 atgtgctatt ggccccagga ctgaagctgc ctcccttcac cctgggactg tggttccaag
2101 gatgagagca gggggttgga gccatggcct tctgggaacc tatggagaaa gggaatccaa
2161 ggaagcagcc aaggctgctc gcagcttccc tgagctgcac ctcttgctaa ccccaccatc
2221 acactgccac cctgccctag ggtctcacta gtaccaagtg ggtcagcaca gggctgagga
2281 tggggctcct atccaccctg gccagcaccc agcttagtgc tggggctagc ccagaaactt
2341 gaatgggacc ctgagagagc caggggtccc ctgaggcccc cctaggggct ttctgtctgc
2401 cccagggtgc tccatggatc tccctgtggc agcaggcatg gagagtcagg gctgccttca
2461 tggcagtagg ctctaagtgg gtgactggcc acaggccgag aaaagggtac agcctctagg
2521 tggggttccc aaagacgcct tcaggctgga ctgagctgct ctcccacagg gtttctgtgc
2581 agctggatct tctctgttgc atacatgcct ggcatctgtc tccccttgtt cctgagtggc
2641 cccacatggg gctctgagca ggctgtatct ggattctggc aataaaagta ctctggatgc
2701 tgcaaaaaaa aaaaaaaaaa aa
//