LOCUS AL080188 3769 bp mRNA linear HTC 22-SEP-2004
DEFINITION Homo sapiens mRNA; cDNA DKFZp434A132 (from clone DKFZp434A132).
ACCESSION AL080188
VERSION AL080188.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3769)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp434A132) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp434A132
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..3769
/db_xref="H-InvDB:HIT000024309"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="434 (synonym: htes3). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp434A132"
/tissue_type="testis"
/note="protocadherin 21, N-terminus truncated, not fully
spliced"
/db_xref="taxon:9606"
CDS <215..1012
/codon_start=1
/gene="DKFZp434A132"
/product="hypothetical protein"
/db_xref="GOA:Q96JP9"
/db_xref="H-InvDB:HIT000024309.16"
/db_xref="HGNC:HGNC:14550"
/db_xref="InterPro:IPR002126"
/db_xref="InterPro:IPR015919"
/db_xref="InterPro:IPR020894"
/db_xref="UniProtKB/Swiss-Prot:Q96JP9"
/protein_id="CAH10732.1"
/translation="AIDEDAEEPNNLVDYSITHAEPANVFDINSHTGEIWLKNSIRSL
DALHNITPGRDCLWSLEVQAKDRGSPSFSTTALLKIDITDAETLSRSPMAAFLIQTKD
NPMKAVGVLAGTMATVVAITVLISTATFWRNKKSNKVLPMRRVLRKRPSPAPRTIRIE
WLKSKSTKAATKFMLKEKPPNENCNNNSPESSLLPRAPALPPPPSVAPSTGAAQWTVP
TVSGSLTPQPTQPPPKPKTMGSPVQSTLISELKQKFEKKSVHNKAYF"
BASE COUNT 950 a 1054 c 954 g 811 t
ORIGIN
1 gataatggaa tcggctagcc catgtgtaag acctacgtaa accctggctt ataggagagc
61 atgcattctg ttcctttccc aactcaatcc tctcaaaata ggatcaggac catttcccat
121 caacccagca agccccatat gacgtgctga tttagccaga gtacacaagg attgtcccca
181 aagcccagct ctgtctgtct ctccctgcgc acaggccata gacgaggatg cagaggaacc
241 caacaacctg gtggactatt ccatcaccca tgcagagccc gccaacgtgt tcgacatcaa
301 ttcccacacg ggggagatct ggctcaagaa ttccatccgc tccctggatg ccctgcacaa
361 catcacacct ggaagggact gcctatggtc cctagaggtg caggccaagg accggggctc
421 cccatccttc agcaccacag ccttactcaa gattgacatc acagatgctg agaccctctc
481 ccggagcccc atggctgcct tcctgataca gaccaaggac aaccccatga aggccgtggg
541 tgtgctggcc ggcaccatgg ccaccgtcgt ggccatcact gtcctcatct ccaccgccac
601 cttctggcgc aacaagaagt ctaacaaggt cctgccaatg cggcgggtgc tccgcaagcg
661 gcccagccct gcgccccgca ccatccgcat tgagtggctc aagtccaaga gcaccaaagc
721 cgctaccaag ttcatgctca aagagaaacc tcccaatgag aactgtaaca acaacagccc
781 agaaagctct ctgctcccga gagctccggc tctccctcca ccacccagcg tggcgcccag
841 cactggcgca gcccagtgga ccgtgcctac cgtctctggc tctctcactc cgcagccgac
901 ccaacccccg ccaaaaccca aaactatggg aagccccgtc cagtcaactc tgatctctga
961 gctcaagcaa aagtttgaga agaagagtgt gcacaacaag gcttacttct agtgtgtgcc
1021 ctatgacccc ccatctttcc tccgcccctg acccccacca ccctgctgct cggactatgc
1081 tccccttcct ctgctcctta aggtcactga cccctgtttt gcacaatggt ataatcccca
1141 ctgtcctcat ctctaccgcc accttctggc gcaacaagaa gttgcgctct gacagggctc
1201 tagtcagggc cttgggcaag acattgggct ctaggatgca attggcaaat acgtccccgt
1261 tactcaaatc cttggcacta ctacaatgcc ctccattctt cagggctgag aattgacgag
1321 aagccagctc acccatccca gacctcacag tccctcaggt tctactggga tctcatcatc
1381 atccttagtc aagcagcagg gccctggcca cgtggagcaa cactgactag aatctggatc
1441 ctgacgcctg cagctgagag caggagcagg aaaaggaggc tcagcactgt ctcaggctgg
1501 aggtcagcga acctcgtggg ctgtaggaaa gcaaatgtag gtaaggggag agcaaggatg
1561 cacagaaaac acactgactg tgggactgtg ccaggatgca tttggaaaga tagagcattc
1621 tgtctgggca gagactgtgg accctggtat gcccacgtgg gacagaggac acagaggtgg
1681 aagattgatc ttgccaagag tgagggcaga tgtctccagc caggactgcc ctgagccgca
1741 aaatgtcaaa gctggagcta tagaggtagc cctaaaggca actagaagag catcagggct
1801 gctctctgag gagctgcccc accagccatc cttgaagaga caattcaggg cagttgatga
1861 atatcagggc tgagatgtgg ggagacttcc gtttttatcc agctcttttg ctcacatcac
1921 gtaaccttgg gaaagctgtt taaagtcgct gatcatcctc ttcctcatct gtaaatgaag
1981 aaagtaggcc ctgtctacct cacatgcagg tctagggtga ggattgaaga aaatagtggt
2041 gatgagggct ttaaccaagt gcaaagcggc atgaatgcaa agtatttttc tgcagcccag
2101 ttctgtgggt gcagctcttc cagaaagtat taggagcctc acatctactc tgccaagcgc
2161 cccagcaggc actgtgctgg gcttaggggc taccactgga tgatggcatt gccgtgactc
2221 acacacctct acttctgttc ttccctcact ccatccccgc taccgtcctg gccagctacc
2281 gtcagagaga accagagctc caagtcttta atttgccaag atgaagaaaa tgagttctca
2341 aggagggaat gctttgcttg aggccacaca gcaggttggt agcaaagatc ttgtctagcc
2401 agggcagccc ttatcagctt gtgacaacct tccccaggac agaagtcata caaggcctct
2461 ggggttaata caaataggtt gtgccctgct ttaaggaacc tgctatcagg aaatctacat
2521 gtgtgcacag agagagaaaa gtagaacagt tctttgcatt tggctctact tactaacaac
2581 ccctctagaa tacattggtg atttcattta aagagattgt atgcatttgt ggctttcctg
2641 atttctgagt ctgtgtttgg aggtgttact gagatgtgcc agtgtgcaga atccttgctg
2701 gggtttctac agtccccaac gtgaacagta ttaagcaaga ggtggactcg agcaatccag
2761 gagcccagac tgagcaaata agtactttcc agcctgtgtt tcaggagagg actgtgctgg
2821 atcatgcttg ccctccacag ggaatacagc atccttacag cttgcatgca atcaacctct
2881 tttgtaaatg gaaaataaag tctgttaccc aaaggccatg ctgatcccct gctccctgct
2941 ttcatttatg tttgctgacc tgtggagacc agtctttctg acacacagtg aagctcaact
3001 tgcctcctgg ctgcttcagc aggtggatcc attcttcgac ccccagatgt gactctaaag
3061 aaggctgaaa atttttgtcc aaattgccat gcagatatct tgaacagcag gacatttgca
3121 ggccttgtct actggacttt tctcccaaac aggacaagcc caggcagggc tgcatggaga
3181 ggaatggaac ctggagctag aattaattgc ccactctccc accctaccag tgcagcccgg
3241 caagggcagg aattgggagg cctagggtgg gcatgaaagc ttgggaagca ctgtcgtctc
3301 tcagacaggc gtcctaaaga cctctaggct ggaagcttgg gcttgcaagt ggatccggga
3361 ccgagggtgg tctcttggac aaccccagga acttggacca aggcagagcc aatcttgcaa
3421 actggccatg gatggggaag tgcccggtag ccagcatgag ccacactagg aaagaggagg
3481 agggtgcagc caaacttaag gcaccggcaa gtgttgtcag cactggagga gaccccgcca
3541 gtggggtgag gccagccaag tccctgtgtt acgaatggtg ggccaagggg ctgtctgctc
3601 ggtcccagta ggacaggcag agctccaggc tggcaccatg gtaggcctcc agggtaagag
3661 ctgggaggca ggaatggcac actgggcagg cttgcccatt cctggccctg agaatggagc
3721 tgtagcctca tggacaataa atggatgtga caccaaaaaa aaaaaaaaa
//