LOCUS AL080080 2405 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp564E1962 (from clone DKFZp564E1962).
ACCESSION AL080080
VERSION AL080080.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2405)
AUTHORS Blum H., Bauersachs S., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (20-JAN-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by LMU (Ludwig Maximilians University, Munich/Germany)
within
the cDNA sequencing consortium of the German Genome Project.
This clone (DKFZp564E1962) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp564E1962
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..2405
/db_xref="H-InvDB:HIT000024201"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="564 (synonym: hfbr2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp564E1962"
/tissue_type="brain"
/note="thioredoxin domain containing protein 1"
/db_xref="taxon:9606"
CDS 24..866
/codon_start=1
/gene="DKFZp564E1962"
/product="hypothetical protein"
/db_xref="GOA:Q9H3N1"
/db_xref="H-InvDB:HIT000024201.16"
/db_xref="HGNC:HGNC:15487"
/db_xref="InterPro:IPR013766"
/db_xref="InterPro:IPR017937"
/db_xref="InterPro:IPR036249"
/db_xref="PDB:1X5E"
/db_xref="UniProtKB/Swiss-Prot:Q9H3N1"
/protein_id="CAB45700.2"
/translation="MAPSGSLAVPLAVLVLLLWGAPWTHGRRSNVRVITDENWRELLE
GDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIITALPT
IYHCKDGEFRRYQGPRTKKDFINFISDKEWKSIEPVSSWFGPGSVLMSSMSALFQLSM
WIRTCHNYFIEDLGLPVWGSYTVFALATLFSGLLLGLCMIFVADCLCPSKRRRPQPYP
YPSKKLLSESAQPLKKVEEEQEADEEDVSEEEAESKEGTNKDFPQNAIRQRSLGPSLA
TDKS"
BASE COUNT 737 a 370 c 460 g 838 t
ORIGIN
1 gggggaggtg ggcaagcggc gaaatggcgc cctccgggag tcttgcagtt cccctggcag
61 tcctggtgct gttgctttgg ggtgctccct ggacgcacgg gcggcggagc aacgttcgcg
121 tcatcacgga cgagaactgg agagaactgc tggaaggaga ctggatgata gaattttatg
181 ccccgtggtg ccctgcttgt caaaatcttc aaccggaatg ggaaagtttt gctgaatggg
241 gagaagatct tgaggttaat attgcgaaag tagatgtcac agagcagcca ggactgagtg
301 gacggtttat cataactgct cttcctacta tttatcattg taaagatggt gaatttaggc
361 gctatcaggg tccaaggact aagaaggact tcataaactt tataagtgat aaagagtgga
421 agagtattga gcccgtttca tcatggtttg gtccaggttc tgttctgatg agtagtatgt
481 cagcactctt tcagctatct atgtggatca ggacttgcca taactacttt attgaagacc
541 ttggattgcc agtgtgggga tcatatactg tttttgcttt agcaactctg ttttccggac
601 tgttattagg actctgtatg atatttgtgg cagattgcct ttgtccttca aaaaggcgca
661 gaccacagcc gtacccatac ccttcaaaaa aattattatc agaatctgca caacctttga
721 aaaaagtgga ggaggaacaa gaggcggatg aagaagatgt ttcagaagaa gaagctgaaa
781 gtaaagaagg aacaaacaaa gactttccac agaatgccat aagacaacgc tctctgggtc
841 catcattggc cacagataaa tcctagttaa attttatagt tatcttaata ttatgatttt
901 gataaaaaca gaagattgat cattttgttt ggtttgaagt gaactgtgac ttttttgaat
961 attgcagggt tcagtctaga ttgtcattaa attgaagagt ctacattcag aacataaaag
1021 cactaggtat acaagtttga aatatgattt aagcacagta tgatggttta aatagttctc
1081 taatttttga aaaatcgtgc caagcaataa gatttatgta tatttgttta ataataacct
1141 atttcaagtc tgagttttga aaatttacat ttcccaagta ttgcattatt gaggtattta
1201 agaagattat tttagagaaa aatatttctc atttgatata atttttctct gtttcactgt
1261 gtgaaaaaaa gaagatattt cccataaatg ggaagtttgc ccattgtctc aagaaatgtg
1321 tatttcagtg acaatttcgt ggtcttttta gaggtatatt ccaaaatttc cttgtatttt
1381 taggttatgc aactaataaa aactacctta cattaattaa ttacagtttt ctacacatgg
1441 taatacagga tatgctactg atttaggaag tttttaagtt catggtattc tcttgattcc
1501 aacaaagttt gattttctct tgtatttttc ttacttacta tgggttacat tttttatttt
1561 tcaaattgga tgataatttc ttggaaacat tttttatgtt ttagtaaaca gtattttctt
1621 gttgtttcaa actgaagttt actgagagat ccatcaaatt gaacaatctg ttgtaattta
1681 aaattttggc cacttttttc agattttaca tcattcttgc tgaacttcaa cttgaaattg
1741 tttttttttt tttttctttt tggatgtgaa ggtgaacatt cctgattttt gtctgatgtg
1801 aaaaagcctt ggtattttac attttgaaaa ttcaaagaag cttaatataa aagtttgcat
1861 tctactcagg aaaaagcatc ttcttgtata tgtcttaaat gtatttttgt cctcatatac
1921 agaaagttct taattgattt tacagtctgt aatgcttgat gttttaaaat aataacactt
1981 ttatattttt taaaagacaa acatcatatt atcctgtgtt ctttcctgac tggtaatatt
2041 gtgtgggatt tcacaggtaa aagtcagtag gatggaacat tttagtgtat ttttactcct
2101 taaagagcta gaatacatag ttttcacctt aaaagaaggg ggaaaatcat aaatacaatg
2161 aatcaactga ccattacgta gtagacaatt tctgtaatgt ccccttcttt ctaggctctg
2221 ttgctgtgtg aatccattag atttacagta tcgtaatata caagttttct ttaaagccct
2281 ctcctttaga atttaaaata ttgtaccatt gaagagttcg gatgtgtaac ttgtgatgcc
2341 ttagaaaaat atcctaagca caaaataaac ctttctaacc acttcaaaaa aaaaaaaaaa
2401 aaaac
//