LOCUS AL050345 1111 bp mRNA linear HUM 14-NOV-2006
DEFINITION Novel human gene mapping to chomosome 22.
ACCESSION AL050345
VERSION AL050345.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1111)
AUTHORS Collins J.E., Huckle E.J.
JOURNAL Submitted (26-MAY-1999) to the INSDC. E-mail contact:
humquery@sanger.ac.uk
COMMENT This cDNA sequence was assembled from public domain ESTs and single
pass sequencing reads from expressed DNA templates, aligned to the
genomic DNA sequence from the bacterial clone 508I15 (AL021707).
The EST sequences listed match this sequence with an identity
of at least 95% between the coordinates shown.
Further information can be found at
http://www.sanger.ac.uk/HGP/Chr22/
FEATURES Location/Qualifiers
source 1..1111
/db_xref="H-InvDB:HIT000250107"
/organism="Homo sapiens"
/chromosome="22"
/map="22q12/13"
/mol_type="mRNA"
/db_xref="taxon:9606"
exon 1..77
/number=1
misc_feature 29..487
/note="matches EST AA314213"
misc_feature join(43..281,261..552)
/note="matches EST AA209372 from clone 645044"
misc_feature join(43..281,261..552,542..576)
/note="matches EST AA209368 from clone 645019"
misc_feature join(66..422,420..464)
/note="matches EST AA304885"
misc_feature 76..115
/note="matches EST AA029112 from clone 470162"
exon 78..193
/number=2
misc_feature 78..193
/note="matches EST H55702 from clone C22_883"
CDS 116..496
/product="hypothetical protein"
/db_xref="GOA:Q9Y3M2"
/db_xref="H-InvDB:HIT000250107.12"
/db_xref="HGNC:HGNC:1307"
/db_xref="InterPro:IPR028118"
/db_xref="PDB:4WRQ"
/db_xref="UniProtKB/Swiss-Prot:Q9Y3M2"
/protein_id="CAB43547.1"
/translation="MPFFGNTFSPKKTPPRKSASLSNLHSLDRSTREVELGLEYGSPT
MNLAGQSLKFENGQWIAETGVSGGVDRREVQRLRRRNQQLEEENNLLRLKVDILLDML
SESTAESHLMEKELDELRISRKRK"
exon 194..299
/number=3
misc_feature complement(227..283)
/note="matches EST AA368893"
misc_feature 256..366
/note="matches EST H23039 from clone 52051"
misc_feature 261..619
/note="matches EST AA447346 from clone 784568"
misc_feature 289..577
/note="matches EST AA384854"
exon 300..418
/number=4
misc_feature join(365..401,400..436)
/note="matches EST T84723 from clone 112030"
misc_feature join(385..625,642..681,681..727,722..750,761..783)
/note="matches EST AA083910 from clone 530302"
misc_feature join(399..732,731..869)
/note="matches EST AA114827 from clone 491129"
misc_feature join(399..464,463..593,595..611)
/note="matches EST AA352209 "
misc_feature join(406..625,684..748,757..786)
/note="matches EST R75956 from clone 143808"
misc_feature join(407..753,753..799)
/note="matches EST AA133767 from clone 503536"
exon 419..1111
/number=5
misc_feature join(444..624,679..706)
/note="matches EST AA092723"
misc_feature 553..900
/note="matches EST AA938362 from clone IMAGE:1558021"
misc_feature 561..1005
/note="matches EST AI140451 from clone IMAGE:1688927"
misc_feature complement(join(627..694,694..716,714..1109))
/note="matches EST AA112077 from clone 530302"
misc_feature complement(628..1108)
/note="matches EST AI400083 from clone IMAGE:2116089"
misc_feature complement(628..1111)
/note="matches EST AI609300 from clone IMAGE:2267321"
misc_feature complement(629..1110)
/note="matches EST AA197278 from clone 645044"
misc_feature complement(join(632..657,652..1110))
/note="matches EST AI261762 from clone IMAGE:1868533"
misc_feature complement(join(642..692,691..711,714..767,761..1110))
/note="matches EST AA197243 from clone 645019"
misc_feature complement(652..1111)
/note="matches EST AI242204 from clone IMAGE:1853939"
misc_feature complement(664..1062)
/note="matches EST AA911212 from clone IMAGE:1526763"
misc_feature join(666..714,715..748,746..863,859..1058)
/note="matches EST AA486696 from clone 841124"
misc_feature complement(join(667..695,696..1111))
/note="matches EST AA838629 from clone IMAGE:1410772"
misc_feature complement(join(673..704,705..1111))
/note="matches EST N59363 from clone 290036"
misc_feature complement(683..1105)
/note="matches EST AA114846 from clone 491129"
misc_feature complement(687..1074)
/note="matches EST AA972617 from clone IMAGE:1582993"
misc_feature complement(706..1110)
/note="matches EST AA931373 from clone IMAGE:1565099"
misc_feature complement(711..1110)
/note="matches EST AA843577 from clone IMAGE:1394174"
misc_feature join(715..748,746..1105)
/note="matches EST AA234016 from clone 666706"
misc_feature complement(721..1110)
/note="matches EST AA854805 from clone IMAGE:1401648"
misc_feature complement(739..1111)
/note="matches EST AI553981 from clone IMAGE:2090009"
misc_feature complement(798..1111)
/note="matches EST N32060 from clone 260150"
/note="matches EST AA678500 from clone 1155436"
misc_feature 800..1111
/note="matches EST F16874"
misc_feature complement(907..1111)
/note="matches EST AA634344 from clone 744149"
misc_feature 923..1069
/note="matches EST AA912615 from clone IMAGE:1524863"
misc_feature complement(929..1111)
/note="matches EST AI623944 from clone IMAGE:2231067"
misc_feature complement(1006..1111)
/note="matches EST AA975153 from clone IMAGE:1555314"
BASE COUNT 267 a 258 c 310 g 276 t
ORIGIN
1 tcaaggtaac tctgggctac agagtccttg ctgggggttc ggggagcgct tggaccccgg
61 cttctgggac gcgtcaggag aagggagcac tggctttgct ttcatcaggc caaagatgcc
121 tttctttggg aatacgttca gtccgaagaa gacacctcct cggaagtcgg catctctctc
181 caacctgcat tctttggatc gatcaacccg ggaggtggag ctgggcttgg aatacggatc
241 cccgactatg aacctggcag ggcaaagcct gaagtttgaa aatggccagt ggatagcaga
301 gacaggggtt agtggcggtg tggaccggag ggaggttcag cgccttcgca ggcggaacca
361 gcagttggag gaagagaaca atctcttgcg gctgaaagtg gacatcttat tagacatgct
421 ttcagagtcc actgctgaat cccacttaat ggagaaggaa ctggatgaac tgaggatcag
481 ccggaagaga aaatgaagac cccagagaca tttattgggg agtaggatgt ggctgagtgc
541 tttttttttg gccagactag cggattcagt cctggaagag agtatcatat aatgagaccc
601 acaggcactg gcacccttgg gttggcaata gaaggtgaca tggaatggag aaaaccaaga
661 ttccagatgg ggatagtaac tagaaggtgc ttcagatgca ctgcctgcgg gtgccagtct
721 gaaaaccaga ccgcacagag gcctggggct gctgatgagc tttttggtgc tctccacaca
781 caagctcgca aacacacatg tcccagaata gctctgttgg gttgtgttgg gagaagcggc
841 tggagttcat tctctcaccc ccttatgttg gtgtttggcg tgtgacagca gttctacaga
901 gctctgtgtt ggggtcatgg atgagcggct ctcttggctc ttaaaggcag gcctctctct
961 tcttgccttt aaagaatcct ccttcctcac acctggcctc ctctggcttc agcttctcag
1021 cagcaagcac cagccttcca caacaacact atatttttat gctactttcc tgtttgcact
1081 actacttttt tattaaacga tgttaaataa t
//