LOCUS AL050073 2440 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp566E2346 (from clone DKFZp566E2346);
partial cds.
ACCESSION AL050073
VERSION AL050073.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2440)
AUTHORS Ottenwaelder B., Obermaier B., Mewes H.W., Gassenhuber J.,
Wiemann S.
JOURNAL Submitted (15-MAY-1999) to the INSDC. MIPS, Am Klopferspitz 18a,
D-82152 Martinsried, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by MediGenomix (Martinsried/Germany) within the cDNA
sequencing consortium of the German Genome Project.
This clone (DKFZp566E2346) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://www.mips.biochem.mpg.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..2440
/db_xref="H-InvDB:HIT000023960"
/organism="Homo sapiens"
/map="498.4 cR from top of Chr11 linkage group"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="566 (synonym: hfkd2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp566E2346"
/tissue_type="kidney"
/db_xref="taxon:9606"
CDS <1..637
/codon_start=2
/gene="DKFZp566E2346"
/product="hypothetical protein"
/note="CGI-80"
/db_xref="GOA:Q9NRN7"
/db_xref="H-InvDB:HIT000023960.16"
/db_xref="HGNC:HGNC:14235"
/db_xref="InterPro:IPR008278"
/db_xref="InterPro:IPR037143"
/db_xref="PDB:2BYD"
/db_xref="PDB:2C43"
/db_xref="PDB:2CG5"
/db_xref="UniProtKB/Swiss-Prot:Q9NRN7"
/protein_id="CAB43257.1"
/translation="SNPYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIP
EFFHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKAIGVGLGFELQRLEF
DLSPLNLDIGQVYKETRLFLDGEEEKEWAFEESKIDEHHFVAVALRKPDGSRHQDVPS
QDDSKPTQRQFTILNFNDLMSSAVPMTPEDPSFWDCFCFTEEIPIRNGTKS"
regulatory 2397..2402
/regulatory_class="polyA_signal_sequence"
polyA_site 2418
BASE COUNT 787 a 384 c 436 g 833 t
ORIGIN
1 atcgaatcca tacccgaatt tcaactttaa catctctcat caaggagact atgcagtgct
61 tgctgctgaa cctgagctgc aagttggaat tgatataatg aagactagtt ttccaggtcg
121 tggttcaatt ccagaattct ttcatattat gaaaagaaag tttaccaaca aagaatggga
181 aacaatcaga agctttaagg atgagtggac tcagctggat atgttttata ggaattgggc
241 acttaaggaa agcttcataa aagccattgg tgttggacta ggatttgaat tgcagcggct
301 tgaatttgat ctatctccat taaacttgga tataggccaa gtttataaag aaacacgttt
361 attcctggat ggagaggaag aaaaagaatg ggcatttgag gaaagcaaaa tagatgagca
421 ccattttgtt gcagttgctc ttaggaaacc cgacggatct agacatcagg atgttccatc
481 tcaggatgat tccaaaccaa cccagaggca atttactatt ctcaacttta atgatttaat
541 gtcatctgcc gttcccatga cacctgaaga tccttcattt tgggactgtt tttgcttcac
601 agaagaaatt ccaatacgaa atggtacaaa gtcatgatga ttccctgagt aacaaaggga
661 aatgaaaact gtttgtgatc ttccgtattc actgaaaaat aaatgcttgt ttagtatcaa
721 attttatttc acgaaagttt tttaaagaac agaaactttt ccaattaaaa aaaaaaagca
781 gacttctggt tcaagatagc tcactggaat acatgtttac ctctttcttt cctaaattgc
841 attgaattga taggaaggat ggcggaatct taaagtgata catgctaact gtagaaaaaa
901 atagaaaatg cacataagca aaaggaaaca tttaaatgct atctttcaaa gataactact
961 cttaaaacct tgagtatctt ttcagacctt tttcttggca aatgaatcca tattgacata
1021 tttgattttt tttaaaaaca tggaaacgta ctgttttgta aattcttttt aactgcacat
1081 ctactgttca taaatatacc tctgtaacat aactttttgt ggttctaatg tactctgttg
1141 tatagctaat acaagttagg atgcttttgg ccagaggtaa cagtgtccaa atataattgg
1201 cctaagtaac ctaggaaatt gtttgacata acacagggtt caggggtgtc attaaagaca
1261 cacttttttt gccttgacct cagttggttt gttttgcctt aggctattcc acctctcgat
1321 cacaagagct gctgctataa cttccagttt tacatctttg taaaattgta tctcaaaggc
1381 agaaaaggcc atttcgtctc tcatttgttt tatccatgag gaagattttt aacaaaagcc
1441 tccagaagat ttcccctcag tttccattga cttagatcag gttacagaga aaggcaatgt
1501 ctgacatttt tggtctctgt tagaagtaga ctctgttgaa aagaaagaag ctaagctagg
1561 tgtggagaat ggaattggaa gcccactgcc ttcccataag aaaggtttac cataatttac
1621 ttactttttt ctgtgttaga cattttgatt atctgcagtt tattactaca agcagtggca
1681 gagtgaatgt ccttgtacat tttgagttac atgcttaatt atgtccttga gaaagtttct
1741 aatagtggaa tgattggttt gactggttca tagggcttta attatacaat ttacccctct
1801 aattagtact atatgtatgt gacttccctc cccctgccag aatactcctt ggtcaattgt
1861 aggtattctt tttggtttaa tttttgccaa tgtaattaaa aaatggtatg tcatttttaa
1921 aatttgtatt tctttcatta caaataagat tgttatgtca gtattgttat tggcttttcg
1981 tattcctctt aacgtgatcc gtctgttcat tgtttttacc tgttttcgtt ttagcaagta
2041 gtacttaatt taaagtgtga acttaatata taagatgcca ggaccatcat attgatgaca
2101 aaaatctatt atgtggttgt agtgcatgtc ttggagttaa actcttaagt atcaagaagt
2161 aaaataattt cattgtttct gttactaaca ttaaaagtgt gcaaattgta taaaattagg
2221 tacttcgatt agtaaaagaa aaaaatttga atgttttttt ttttatttta ttaagcatgc
2281 ccagttatgc caagcatagt aaataaaggt caagtagcat ttataataga ggaagtattg
2341 ttatccctag catgagtgta atggtgatat gaaaaacttt gtcttgtcat tataataata
2401 aaaaaatgaa catttattat gaaaaaaaaa aaaaaaaaaa
//