LOCUS AL050040 2786 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp566K0524 (from clone DKFZp566K0524);
partial cds.
ACCESSION AL050040
VERSION AL050040.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2786)
AUTHORS Ansorge W., Wirkner U., Mewes H.W., Gassenhuber J., Wiemann S.
JOURNAL Submitted (15-MAY-1999) to the INSDC. MIPS, Am Klopferspitz 18a,
D-82152 Martinsried, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp566K0524) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://www.mips.biochem.mpg.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..2786
/db_xref="H-InvDB:HIT000023936_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="566 (synonym: hfkd2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp566K0524"
/tissue_type="kidney"
/db_xref="taxon:9606"
CDS <1..1198
/codon_start=2
/gene="DKFZp566K0524"
/product="hypothetical protein"
/note="strong similarity to protein-tyrosine-phosphatases"
/db_xref="GOA:Q9Y406"
/db_xref="H-InvDB:HIT000023936_03.4"
/db_xref="InterPro:IPR000242"
/db_xref="InterPro:IPR000387"
/db_xref="InterPro:IPR003595"
/db_xref="InterPro:IPR016130"
/db_xref="InterPro:IPR029021"
/db_xref="UniProtKB/TrEMBL:Q9Y406"
/protein_id="CAB43248.1"
/translation="GPNWRGCWGCSGTVGAAPQAQVFENKVNSEKVKLSLRNFPHNDY
EDVFEEPSESGSDPSMWTARGPFRRDRWSSEDEEAAGPSQALSPLLSDTRKIVSEGEL
DQLAQIRPLIFNFHEQTAIKDCLKILEEKTAAYDIMQEFMALELKNLPGEFYSGNQPS
NREKNRYRDILPYDSTRVPLGKSKDYINASYIRIVNCGEEYFYIATQGPLLSTIDDFW
QMVLENNSNVIAMITREMEGGIIKCYHYWPISLKKPLELKHFRVFLENYQILQYFIIR
MFQVVEKSTGTSHSVKQLQFTKWPDHGTPASADSFIKYIRYARKSHLTGPMVVHCSAG
IGRTGVFLCVDVVFCAIVKDCSFNIMDIVAQMREQRSGMVQTKEQYHFCYDIVLEVLR
KLLTLD"
regulatory 2761..2766
/regulatory_class="polyA_signal_sequence"
polyA_site 2776
BASE COUNT 841 a 494 c 550 g 901 t
ORIGIN
1 tggacccaac tggcgaggct gctggggttg cagcgggaca gttggggcgg ccccgcaggc
61 ccaggttttt gaaaataaag ttaattcaga gaaggtaaaa ctttctcttc ggaatttccc
121 acataatgat tatgaggatg tttttgaaga gccttcagaa agtggcagtg atcccagcat
181 gtggacagcc agaggcccct tcagaagaga caggtggagc agtgaggatg aggaggctgc
241 agggccatca caggctctct cccctctact ttctgatacg cgcaaaattg tttctgaagg
301 agaactagat cagttggctc agattcggcc attaatattc aattttcatg agcagacagc
361 catcaaggat tgtttgaaaa tccttgagga aaaaacagca gcgtatgata tcatgcagga
421 atttatggct ttagaactta agaatctgcc tggtgagttc tactctggga atcaaccaag
481 caacagagaa aaaaacagat accgagatat tcttccatat gattcaacac gcgttcctct
541 tggaaaaagc aaggactaca tcaatgctag ttatattaga atagtcaatt gtggagaaga
601 gtatttttat atcgctactc aaggaccact gctgagcacc atagatgact tttggcaaat
661 ggtgttggaa aataattcaa atgttattgc catgataacc agagagatgg aaggtggaat
721 tatcaaatgc taccattact ggcccatttc tctgaagaag ccattggaat tgaaacactt
781 ccgtgtattc ctggagaact accagatact tcaatatttc atcattcgaa tgtttcaagt
841 tgtggagaag tccacgggaa ctagtcactc tgtaaaacag ttgcagttca ccaagtggcc
901 agaccatggc actcctgcct cagcagatag cttcataaaa tatattcgtt atgcaaggaa
961 gagccacctt acaggaccca tggttgttca ctgcagtgcc ggcataggcc ggacaggggt
1021 gttcctatgt gtggatgtcg tgttctgtgc catcgtaaag gactgttcat tcaacatcat
1081 ggatatagtg gcccaaatga gagaacaacg ttctggcatg gttcaaacga aggagcagta
1141 tcacttttgt tacgatattg tgcttgaagt tcttcggaaa cttctgactt tggattaaga
1201 aagacttctg ttgcctctca cttgaaatta ccaagtgggt ttgcacctcc tcataaagaa
1261 catgtttgca ctgtgctgaa gggctttgct atgcatacaa tctgctttct tggtttatca
1321 gtttattttc tttctaaaag ctccctgaag ggcaatatca tttggcttgg ggtgatcagt
1381 gtttacttat tgatcttgct agacaatatc aaaataactt cccacatttt ccagtgaaac
1441 agatgttaca taaaacgatt gcagcttggc tatttggttg aagggattac agagcccaat
1501 aaaggattta aaatatattc attaagattt tatttggaaa ggtggctgga gagagctgag
1561 gatttccagg actttgtaag ttcttattct gggagaacat aaggccaata atcatgacct
1621 cttccaggca tttttaagac agatgtctat tcatgttctt tagctagagc ctgtactttt
1681 tgctggcatt tgaataaccc agtttaaaaa gagtccagtt agggtggact aactttggac
1741 acaaattggc ttccatttcc tacattttca tactgctgcc ttcctacagc tgctagacca
1801 agacctgttg gtctgggaag catttcatgg atagggagag ctcctctcgg tgaacagtcc
1861 aaaactaaaa tagatgttta tatagaaagc ccaagaggag atttttgcca tgcctgagtt
1921 ctttcctatc ccaccctaac acttaacata ttacttagtc tgctttgtta aaagcaagta
1981 ttacctttaa cttgcctctt actctttgcc ctttagctaa ctaataaagt ttgatatggg
2041 cattattata taattctgag tcattcatgg tatctctcat gtttgatgta tttttcaaac
2101 taagatctat gatagttttt ttttccagag ttccatcaaa tcatttattt cctttacttt
2161 ctcacctctg ttgaaacatt tagaaactgg atttgggaac ccaattttgg aaaaccagat
2221 tcatagtcat gaaaatggaa acttccatat tctgtttttg aaaagatgtg gccattatta
2281 cagtaatttt attataggac tttgcctcgt acaattaata gtgatatttt ggacaaggag
2341 ttctggtgac aagctatacc taattataag ctataaaaca atagatatga gtgtttgtac
2401 agtttaactc aatggagatc agaatattct atgtattgag aaaatgttta atatcaatct
2461 ataaatcttg aatttctaag aggcttattt tgttcttttg gctgaatgag tatatttgaa
2521 ttggttgaat aattaataat tctcattgta aaaataatta tatgccaaaa atatatttga
2581 tgttaaatca aatagatgat tctgtttaca ttgttcatat gaataataat ctgtgttaat
2641 ttcattttga taattggcct ttaatatttg tatctctaat tttattttct ctctgttact
2701 gtaaaataat agctataatg tataacaatt ttcttcagaa gaattctatg ctattattaa
2761 aataaaatat ttactgaaaa aaaaaa
//