LOCUS AL049952 1420 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp564O1822 (from clone DKFZp564O1822).
ACCESSION AL049952
VERSION AL049952.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1420)
AUTHORS Wambutt R., Heubner D., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Agowa (Berlin/Germany) within the cDNA sequencing
consortium
of the German Genome Project.
This clone (DKFZp564O1822) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp564O1822
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..1420
/db_xref="H-InvDB:HIT000023858"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="564 (synonym: hfbr2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp564O1822"
/tissue_type="brain"
/note="procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3,
N-terminus truncated"
/db_xref="taxon:9606"
CDS <1..1098
/codon_start=1
/gene="DKFZp564O1822"
/product="hypothetical protein"
/db_xref="GOA:Q9UG85"
/db_xref="H-InvDB:HIT000023858.18"
/db_xref="InterPro:IPR001006"
/db_xref="InterPro:IPR005123"
/db_xref="InterPro:IPR006620"
/db_xref="UniProtKB/TrEMBL:Q9UG85"
/protein_id="CAB43221.1"
/translation="GAMDLCRQDPECEFYFSLDADAVLTNLQTLRILIEENRKVIAPM
LSRHGKLWSNFWGALSPDEYYARSEDYVELVQRKRVGVWNVPYISQAYVIRGDTLRME
LPQRDVFSGSDTDPDMAFCKSFRDKGIFLHLSNQHEFGRLLATSRYDTEHLHPDLWQI
FDNPVGWKEQYIHENYSRALEGEGIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQWS
GGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTESLFPGYHTKARAV
MNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKGLDYEGGGCRFLRYDCVISSPRKGW
ALLHPGRLTHYHEGLPTTWGTRYIMVSFVDP"
BASE COUNT 291 a 439 c 411 g 279 t
ORIGIN
1 ggggccatgg acctgtgtcg gcaggacccc gagtgtgagt tctacttcag cctggacgcc
61 gacgctgtcc tcaccaacct gcagaccctg cgtatcctca ttgaggagaa caggaaggtg
121 atcgccccca tgctgtcccg ccacggcaag ctgtggtcca acttctgggg cgccctgagc
181 cccgatgagt actacgcccg ctccgaggac tacgtggagc tggtgcagcg gaagcgagtg
241 ggtgtgtgga atgtaccata catctcccag gcctatgtga tccggggtga taccctgcgg
301 atggagctgc cccagaggga tgtgttctcg ggcagtgaca cagacccgga catggccttc
361 tgtaagagct ttcgagacaa gggcatcttc ctccatctga gcaatcagca tgaatttggc
421 cggctcctgg ccacttccag atacgacacg gagcacctgc accccgacct ctggcagatc
481 ttcgacaacc ccgtcggctg gaaggagcag tacatccacg agaactacag ccgggccctg
541 gaaggggaag gaatcgtgga gcagccatgc ccggacgtgt actggttccc actgctgtca
601 gaacaaatgt gtgatgagct ggtggcagag atggagcact acggccagtg gtcaggcggc
661 cggcatgagg attcaaggct ggccggaggc tacgagaatg tgcccaccgt ggacatccac
721 atgaagcagg tggggtacga ggaccagtgg ctgcagctgc tgcggacgta tgtgggcccc
781 atgaccgaga gcctgtttcc cggttaccac accaaggcgc gggcggtgat gaactttgtg
841 gttcgctacc ggccagacga gcagccgtct ctgcggccac accacgactc atccaccttc
901 accctcaacg ttgccctcaa ccacaagggc ctggactatg agggaggtgg ctgccgcttc
961 ctgcgctacg actgtgtgat ctcctccccg aggaagggct gggcactcct gcaccccggc
1021 cgcctcaccc actaccacga ggggctgcca acgacctggg gcacacgcta catcatggtg
1081 tcctttgtcg acccctgaca ctcaaccact ctgccaaacc tgccctgcca ttgtgccttt
1141 ttagggggcc tggcccccgt cctgggagtt gggggatggg tctctctgtc tccccacttc
1201 ctgagttcat gttccgcgtg cctgaactga atatgtcacc ttgctcccaa gacacggccc
1261 tctcaggaag ctcccggagt ccccgcctct ctcctccgcc cacaggggtt cgtgggcaca
1321 gggcttctgg ggactccccg cgtgataaat tattaatgtt ccgcagtctc actctgaata
1381 aaggacagtt tgtaagtctt gaaaaaaaaa aaaaaaaaaa
//