LOCUS AL049800 4494 bp mRNA linear HUM 14-NOV-2006
DEFINITION Novel human gene mapping to chomosome 1.
ACCESSION AL049800
VERSION AL049800.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4494)
AUTHORS Rhodes S.
JOURNAL Submitted (06-MAY-1999) to the INSDC. E-mail contact:
humquery@sanger.ac.uk
COMMENT This cDNA sequence was assembled from public domain ESTs and single
pass sequencing reads from expressed DNA templates, aligned to the
genomic DNA sequence from the bacterial clone 1114G22 (AL008626).
The EST sequences listed match this sequence with an identity
of at least 95% between the coordinates shown.
Further information can be found at
http://www.sanger.ac.uk/HGP/Chr1/
Not an experimentally determined gene.
Isoform of dJ1114G22.C1.1a (HS14G221A).
Sanger Centre name : dJ1114G22.C1.1
FEATURES Location/Qualifiers
source 1..4494
/db_xref="H-InvDB:HIT000250094"
/organism="Homo sapiens"
/chromosome="1"
/map="1q24-25"
/mol_type="mRNA"
/db_xref="taxon:9606"
exon 1..84
/number=1
misc_feature join(1..34,71..407)
/note="matches EST N25843 from clone 262489"
exon 85..158
/number=2
exon 159..334
/number=3
misc_feature complement(190..666)
/note="matches EST AA845913 from clone IMAGE:1414758"
misc_feature complement(191..676)
/note="matches EST AI554645 from clone IMAGE:2168777"
misc_feature complement(272..676)
/note="matches EST AI560443 from clone IMAGE:2167267"
exon 335..4494
/number=4
misc_feature join(477..685,730..778)
/note="matches EST M85618 from clone HFBCK91"
CDS 851..1312
/product="hypothetical protein"
/db_xref="GOA:Q15053"
/db_xref="H-InvDB:HIT000250094.14"
/db_xref="HGNC:HGNC:28950"
/db_xref="InterPro:IPR039964"
/db_xref="UniProtKB/Swiss-Prot:Q15053"
/protein_id="CAB42561.1"
/translation="MHYVHVHRVTTQPRNKPQTKCPSGGQSQGPRGQFLDTVLAAMCP
IAMLLTADPGMPPTCLWHTPHAKHKEHLSIHLNMVPKCVHMHVTHTHTNSGSRYVGKY
ILLIKWSLAMYFVQGSTLSTVTKMSHGKALPDSDTYIQFPNQQGPHTPSIP"
misc_feature 1095..1335
/note="matches EST AA296438"
misc_feature complement(1851..2070)
/note="matches EST AI202966 from clone IMAGE:1942578"
misc_feature 2244..2534
/note="matches EST AA359242"
misc_feature 2515..2854
/note="matches EST AA343958"
misc_feature complement(2582..2838)
/note="matches EST T04985 from clone HFBCK91"
misc_feature join(2710..2821,2829..3004,3004..3035)
/note="matches EST H02176 from clone 150668"
misc_feature join(2814..3086,3084..3167)
/note="matches EST AA359203"
misc_feature join(2842..3069,3081..3118)
/note="matches EST T82224 from clone 109567"
misc_feature 2842..3069
/note="matches EST T84408 from clone 111238"
misc_feature 3045..3362
/note="matches EST T87595 from clone 115028"
misc_feature 3051..3107
/note="matches EST T99456 from clone 122491"
misc_feature 3097..3211
/note="matches EST AA443567 from clone 771231"
misc_feature 3166..3323
/note="matches EST T28636"
misc_feature join(3167..3308,3297..3425,3425..3456)
/note="matches EST R48229 from clone 153478"
misc_feature 3384..3558
/note="matches EST R08958 from clone 127490"
misc_feature join(3430..3552,3547..3630,3608..3920)
/note="matches EST AA476824 from clone 784741"
misc_feature complement(3433..3942)
/note="matches EST AA858080 from clone IMAGE:1323651"
misc_feature join(3446..3552,3547..3568,3569..3716,3878..3934)
/note="matches EST AA465478 from clone IMAGE:814054"
misc_feature 3452..3841
/note="matches EST AA044572 from clone 488634"
misc_feature complement(join(3452..3541,3541..3901))
/note="matches EST AA044894 from clone 488634"
misc_feature complement(3452..3834)
/note="matches EST AI287701 from clone IMAGE:1964584"
misc_feature join(3454..3552,3547..3684)
/note="matches EST H45761 from clone 188248"
misc_feature join(3460..3552,3547..3630,3608..3852)
/note="matches EST AA447496 from clone 784277"
misc_feature complement(3482..3947)
/note="matches EST AI342506 from clone IMAGE:1949313"
misc_feature complement(join(3489..3537,3546..3905))
/note="matches EST H95372 from clone 256592"
misc_feature complement(3492..3944)
/note="matches EST AI199836 from clone IMAGE:1757177"
misc_feature complement(3505..3943)
/note="matches EST N32205 from clone 258601"
misc_feature join(3519..3650,3651..3698)
/note="matches EST N57302 from clone 258601"
misc_feature complement(3541..3942)
/note="matches EST AA555171 from clone IMAGE:1030508"
misc_feature complement(3541..3946)
/note="matches EST AA593111 from clone IMAGE:928221"
misc_feature complement(3542..3630)
/note="matches EST AA443770 from clone 784741"
misc_feature complement(join(3543..3630,3608..3946))
/note="matches EST AA447497 from clone 784277"
misc_feature 3547..3675
/note="matches EST H95398 from clone 256592"
misc_feature complement(3547..3943)
/note="matches EST AA443568 from clone 771231"
misc_feature complement(3598..3947)
/note="matches EST AI085844 from clone IMAGE:1659489"
misc_feature complement(3703..3945)
/note="matches EST T79953 from clone 115028"
misc_feature complement(3838..3943)
/note="matches EST AI436393 from clone IMAGE:2129207"
misc_feature complement(4030..4494)
/note="matches EST AA836201 from clone IMAGE:1368730"
misc_feature complement(4097..4490)
/note="matches EST AA749341 from clone IMAGE:1270394"
misc_feature complement(join(4109..4130,4176..4479))
/note="matches EST H45762 from clone 188248"
misc_feature complement(4147..4257)
/note="matches EST T25960"
misc_feature complement(join(4147..4216,4217..4426))
/note="matches EST AA829319 from clone IMAGE:1358352"
misc_feature complement(4166..4494)
/note="matches EST AI188621 from clone IMAGE:1723299"
misc_feature complement(4253..4489)
/note="matches EST AA465479 from clone IMAGE:814054"
misc_feature 4337..4494
/note="matches EST D45632 from clone lg2550"
regulatory 4471..4476
/regulatory_class="polyA_signal_sequence"
BASE COUNT 1257 a 1089 c 1004 g 1144 t
ORIGIN
1 tggagcgaaa cctcaactat gccaggcgtc ggcccgtagg aaggcaggga acacagaggg
61 cgctgccctc ggcggcagcg gcagattgtt ccccattttg gagatgaaga aactgagact
121 caaagcagct gagtgacctt cccaaggaca cacactgaac tgggcggtga tcaggatctg
181 aatgcacagg gcgggtgttc agcgattgtt tactacgttg aacgtgacct ccaggaaagc
241 agttctggcc gagatcccct gacaacgcaa agcaagaagt aacgtggaag gaggctcccc
301 aagctggctg gccattttgc tgctgtgtgt ggaggtgctg ccagtggcat gcccaaaccc
361 aaagctggaa gaggaataaa ttacaagtgg tcaaggttgc atccttttga gcccaggacc
421 tgcttgtaag ccgagagggt tctctggccc taatctagcc aagcaccatg gagagaatca
481 gtgccttctt cagctctatc tgggacacca tcttgaccaa acaccaagaa ggcatctaca
541 acaccatctg cctgggagtc ctcctgggcc tgccactctt ggtgatcatc acactcctct
601 tcatctgttg ccattgctgc tggagcccac caggcaagag gggccagcag ccagagaaga
661 acaagaagaa gaagaagaag aagaagaaga aggatgaaga agacctctgg atctctgctc
721 aacccaagct tctccagatg gagaagagac catcactgcc tgtttagtta ggcaggaagc
781 agaggtgttt cctttctggg gctaagcctc cttctgacca cacacagaca tttcaggaac
841 ccctgaaata atgcactatg tccatgtcca cagagtaact actcaaccaa ggaacaaacc
901 tcagactaag tgtcccagtg gagggcagtc ccagggacca cgtggacaat tcttggatac
961 tgtcttggca gctatgtgtc caatagcaat gctccttact gcagacccag gcatgcctcc
1021 cacctgtctc tggcataccc cacatgcaaa gcacaaagaa catttatcca tacatctcaa
1081 tatggttccc aagtgtgtgc acatgcacgt aacacacaca cacacaaatt caggtagcag
1141 gtacgtgggc aagtatattc tgctcatcaa atggtcattg gctatgtact ttgtgcaggg
1201 aagtacatta tctacagtca caaaaatgtc tcatgggaaa gccttgccag attcagacac
1261 atatatacaa tttcctaacc agcaaggccc ccatacacca tctattccat aaaccactca
1321 ggttacagat gcatgctttc ctatttctaa ctctacacat aaacttttac tggaagtact
1381 cataattgga cattccagca acctgctaca gtccccaccc ttgtgtgtct tgatacagac
1441 acaccaagtt tctgtgcctc tgacccctca cctgtgccaa gatgtttaaa gtgtgatggt
1501 tcaaaattca ttgaaagctc ttttcttgta actcatgaca aagtccgtcc tcattgccac
1561 tgagaggtgt ttaatgtgat ccaagacctc tctgtgaaac attacccccg caaaccactc
1621 agcaaagtgc ctttctccaa gcaagaacaa agagctcttg gtggtgactg ctagaaaatt
1681 atggaagccc actcatttat gtcagtggac tgcaactgtg tacctgtgca atgtttacag
1741 atggaaaggg tgaggagatg ctacacctga gctaggtatc tcctatataa ccaaagtttc
1801 cagcagggaa ggaactagac aatcatcagt gcagtctcac agaaggcaac actggaagtg
1861 atgtcataag gttgtgatgt gtgcacggta tggcacaggt gggatgcaga ggtaacagag
1921 tttaaatgaa agtaggatga agctataaag aggtttattt atatttatat tgaagctcag
1981 gcaagtgcct tgcacacagt aggtacttat aactaactgt ggttactgtt ggatatgtga
2041 tgttgttaag ggtaagcttg taatacctca ccagttctcc ccgagtgatc ttctcttcta
2101 agtgagccca ctaattgctg caatggatga aattgggtgt ttaatgctgg agagcacatg
2161 taggtgacac atgtgccttg aggtatgtga ggacatgtaa attagatcca cagtgagctg
2221 aggagggctt tccccgccag agtgaggttg ggaagcagag ttaatccact tataggatga
2281 actgcttggt atttttattg tattgtgact gtattacaaa gatggacaat tcactccttg
2341 ggagcaagtt atgctctaga agtttattta caaatatgct gggcagctct cttgaaatat
2401 tttcccaagg aagctattct acacagtggc aaaattgcta tctaattaat aatgtagcta
2461 aactatgata tttatagtag caaaaaacta aattctataa gattgcatta aaggaaagat
2521 atattctatt tgctcacttg ggctgcttgg tactcacctg ccctccaggt gtactttagg
2581 cctgtggagg gtgggcattt agtggtgacc cttgcaccag ggttttctaa cagatgaccc
2641 tgtgaatcat aatttaaacc tgcatatatt ttatagccag tcacatttgc cctctcaccc
2701 tatatggcca taaactgcct aagcactcag gcctcccact catcaacccc tttgaccaga
2761 gaaagaagca ctctggttct ctatcccctt gtcacataga gagtttgtca tggggcctct
2821 ggctgtgccc ttcacataac agaatgactt gccatctgcc tgcaccaaac ccagggatgt
2881 ggaagacatc tccccacaac tgccactgct caccaggaca agctgccctt cctgtctcca
2941 cctctcagtc cccctagaat ggatggctgg ggagaggtgg aggctgacag ctgagacgta
3001 gtgtcagata tgatctagga gggcggatca ccgggatccg ggaccataca agtaacatgg
3061 tttccatggc aactgcttgc tcctttgaat taagacagca gtcagttgtc attgccatga
3121 caaggcctct atctccaggc acaatgtccc tgctgtctcc taatccaatg gacttgctct
3181 caccccaggg atgaaacacc cagaaactca cttctcagtc acttccacag ccgatgactc
3241 agaagagcca aacccagaat ggggcctctc ttttccccat cacagactcc cctgacaacc
3301 tttcctggcg taactagagg agtcccagtg caggataggc cctaaacgtt ttgttaaata
3361 aacaggtgca tgaaaggagc ctaaggccat tgttgatatc cactctcttc tttccacttc
3421 cttctcatct ttttctccat gttttatgct tctctgattc cctcttctgc ctgcaccaga
3481 ccagccccag ccctttattc ctctccattt tcactccttc cagcctctgt ccctgaactg
3541 ccactggcaa cccatgggac ctcaggacca gagactgctt gactcatctg gggagggtaa
3601 gttcacgggg gacaaaaaaa tgattcctaa agaagaggct tcctagacca gcacaggctc
3661 gagaaagaca tcccctaggc ctggacttct gagcagcttt agccaggctc cggacggcag
3721 ccagaggagg cctttcccca ttgctccttt ccccattgct caatggattc catgtttctt
3781 tttcttgggg ggagcaggga gggagaaagg tagaaaaatg gcagccacct ttccaagaaa
3841 aatataaagg gtccaagctg tatagtattt gtcagtattt ttttctgtaa aattcaaaca
3901 cacacaaaag aaaaatttat ttaaataaaa tactttgaaa atgaaaagtc ttgatgtagt
3961 cagatggtta ctctcttaac attaggtatt acccccactc agacatcact cagaaatgat
4021 caatgcaggg actctttctg tgacacaaat gtcccagccc tccctggtca ccgccttcgc
4081 catggtagag tcataggtct gaggatgagg aatgtggctg tctcaccctt gcttgcaaaa
4141 cagatggcct tggagaccag actccctcaa aggtgccagc tacaggaaaa atatactgat
4201 gttccttggc aacacttaca gaactttcca tcaatgaggt ccatcaatgg cttcttaaag
4261 gaaaaggggg gaaatagcaa aaacctaagg aagaatggac ctttgagtta aatccagtgt
4321 ttgttgggaa aggagggatc aaaaacctct atagtagcca ctagggcaaa aactgtgtgt
4381 atgtgtgtgt gtaagtgtgt gtacactgtt caatatggtt caatatggta ccaatagcca
4441 catgtgacta tttaaattca ttgcaatgaa ataaaattaa aggtatacta gctc
//