LOCUS AL049799 4564 bp mRNA linear HUM 14-NOV-2006
DEFINITION Novel human gene mapping to chomosome 1.
ACCESSION AL049799
VERSION AL049799.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4564)
AUTHORS Rhodes S.
JOURNAL Submitted (06-MAY-1999) to the INSDC. E-mail contact:
humquery@sanger.ac.uk
COMMENT This cDNA sequence was assembled from public domain ESTs and single
pass sequencing reads from expressed DNA templates, aligned to the
genomic DNA sequence from the bacterial clone 1114G22 (AL008626).
The EST sequences listed match this sequence with an identity
of at least 95% between the coordinates shown.
Further information can be found at
http://www.sanger.ac.uk/HGP/Chr1/
Not an experimentally determined gene.
Isoform of dJ1114G22.C1.1 (HS114G221)
Sanger Centre name : dJ1114G22.C1.1a
FEATURES Location/Qualifiers
source 1..4564
/db_xref="H-InvDB:HIT000250093"
/organism="Homo sapiens"
/chromosome="1"
/map="1q24-25"
/mol_type="mRNA"
/db_xref="taxon:9606"
exon 1..154
/number=1
misc_feature 44..311
/note="matches EST AA348192"
exon 155..228
/number=2
misc_feature 156..477
/note="matches EST N25843 from clone 262489"
exon 229..404
/number=3
misc_feature complement(260..736)
/note="matches EST AA845913 from clone IMAGE:1414758"
misc_feature complement(261..746)
/note="matches EST AI554645 from clone IMAGE:2168777"
misc_feature complement(342..746)
/note="matches EST AI560443 from clone IMAGE:2167267"
exon 405..4564
/number=4
misc_feature join(547..755,800..848)
/note="matches EST M85618 from clone HFBCK91,"
CDS 921..1382
/product="hypothetical protein"
/db_xref="GOA:Q15053"
/db_xref="H-InvDB:HIT000250093.14"
/db_xref="HGNC:HGNC:28950"
/db_xref="InterPro:IPR039964"
/db_xref="UniProtKB/Swiss-Prot:Q15053"
/protein_id="CAB42560.1"
/translation="MHYVHVHRVTTQPRNKPQTKCPSGGQSQGPRGQFLDTVLAAMCP
IAMLLTADPGMPPTCLWHTPHAKHKEHLSIHLNMVPKCVHMHVTHTHTNSGSRYVGKY
ILLIKWSLAMYFVQGSTLSTVTKMSHGKALPDSDTYIQFPNQQGPHTPSIP"
misc_feature 1165..1405
/note="matches EST AA296438"
misc_feature complement(1921..2140)
/note="matches EST AI202966 from clone IMAGE:1942578"
misc_feature 2314..2604
/note="matches EST AA359242"
misc_feature 2585..2924
/note="matches EST AA343958"
misc_feature complement(2652..2908)
/note="matches EST T04985 from clone HFBCK91"
misc_feature join(2780..2891,2899..3074,3074..3105)
/note="matches EST H02176 from clone 150668"
misc_feature join(2884..3156,3154..3237)
/note="matches EST AA359203"
misc_feature 2912..3139
/note="matches EST T84408 from clone 111238"
misc_feature join(2912..3139,3151..3188)
/note="matches EST T82224 from clone 109567"
misc_feature 3115..3432
/note="matches EST T87595 from clone 115028"
misc_feature 3121..3177
/note="matches EST T99456 from clone 122491"
misc_feature 3167..3281
/note="matches EST AA443567 from clone 771231"
misc_feature 3236..3393
/note="matches EST T28636"
misc_feature join(3237..3378,3367..3495,3495..3526)
/note="matches EST R48229 from clone 153478"
misc_feature 3454..3628
/note="matches EST R08958 from clone 127490"
misc_feature join(3500..3622,3617..3700,3678..3990)
/note="matches EST AA476824 from clone 784741"
misc_feature complement(3503..4012)
/note="matches EST AA858080 from clone IMAGE:1323651"
misc_feature join(3516..3622,3617..3638,3639..3786,3948..4004)
/note="matches EST AA465478 from clone IMAGE:814054"
misc_feature 3522..3911
/note="matches EST AA044572 from clone 488634"
misc_feature complement(3522..3904)
/note="matches EST AI287701 from clone IMAGE:1964584"
misc_feature complement(join(3522..3611,3611..3971))
/note="matches EST AA044894 from clone 488634"
misc_feature join(3524..3622,3617..3754)
/note="matches EST H45761 from clone 188248"
misc_feature join(3530..3622,3617..3700,3678..3922)
/note="matches EST AA447496 from clone 784277"
misc_feature complement(3552..4017)
/note="matches EST AI342506 from clone IMAGE:1949313"
misc_feature complement(join(3559..3607,3616..3975))
/note="matches EST H95372 from clone 256592"
misc_feature complement(3562..4014)
/note="matches EST AI199836 from clone IMAGE:1757177"
misc_feature complement(3575..4013)
/note="matches EST N32205 from clone 258601"
misc_feature join(3589..3720,3721..3768)
/note="matches EST N57302 from clone 258601"
misc_feature complement(3611..4012)
/note="matches EST AA555171 from clone IMAGE:1030508"
misc_feature complement(3611..4016)
/note="matches EST AA593111 from clone IMAGE:928221"
misc_feature complement(3612..3700)
/note="matches EST AA443770 from clone 784741"
misc_feature complement(join(3613..3700,3678..4016))
/note="matches EST AA447497 from clone 784277"
misc_feature complement(3617..4013)
/note="matches EST AA443568 from clone 771231"
misc_feature 3617..3745
/note="matches EST H95398 from clone 256592"
misc_feature complement(3668..4017)
/note="matches EST AI085844 from clone IMAGE:1659489"
misc_feature complement(3773..4015)
/note="matches EST T79953 from clone 115028"
misc_feature complement(3908..4013)
/note="matches EST AI436393 from clone IMAGE:2129207"
misc_feature complement(4100..4564)
/note="matches EST AA836201 from clone IMAGE:1368730"
misc_feature complement(4167..4560)
/note="matches EST AA749341 from clone IMAGE:1270394"
misc_feature complement(join(4179..4200,4246..4549))
/note="matches EST H45762 from clone 188248"
misc_feature complement(join(4217..4286,4287..4496))
/note="matches EST AA829319 from clone IMAGE:1358352"
misc_feature complement(4217..4327)
/note="matches EST T25960"
misc_feature complement(4236..4564)
/note="matches EST AI188621 from clone IMAGE:1723299"
misc_feature complement(4323..4559)
/note="matches EST AA465479 from clone IMAGE:814054"
misc_feature 4407..4564
/note="matches EST D45632 from clone lg2550"
regulatory 4540..4545
/regulatory_class="polyA_signal_sequence"
BASE COUNT 1272 a 1117 c 1024 g 1151 t
ORIGIN
1 ccggggccct acacgccaga cctggctcgg ggtgggagtg cagaggcaac caaaaaggaa
61 cccacacctc cctccagggc ccggggcgct gtcagacggg gcagcaacca ggagattccc
121 tgggcctgca ggaagccctt ccgcggaccg aaagattgtt ccccattttg gagatgaaga
181 aactgagact caaagcagct gagtgacctt cccaaggaca cacactgaac tgggcggtga
241 tcaggatctg aatgcacagg gcgggtgttc agcgattgtt tactacgttg aacgtgacct
301 ccaggaaagc agttctggcc gagatcccct gacaacgcaa agcaagaagt aacgtggaag
361 gaggctcccc aagctggctg gccattttgc tgctgtgtgt ggaggtgctg ccagtggcat
421 gcccaaaccc aaagctggaa gaggaataaa ttacaagtgg tcaaggttgc atccttttga
481 gcccaggacc tgcttgtaag ccgagagggt tctctggccc taatctagcc aagcaccatg
541 gagagaatca gtgccttctt cagctctatc tgggacacca tcttgaccaa acaccaagaa
601 ggcatctaca acaccatctg cctgggagtc ctcctgggcc tgccactctt ggtgatcatc
661 acactcctct tcatctgttg ccattgctgc tggagcccac caggcaagag gggccagcag
721 ccagagaaga acaagaagaa gaagaagaag aagaagaaga aggatgaaga agacctctgg
781 atctctgctc aacccaagct tctccagatg gagaagagac catcactgcc tgtttagtta
841 ggcaggaagc agaggtgttt cctttctggg gctaagcctc cttctgacca cacacagaca
901 tttcaggaac ccctgaaata atgcactatg tccatgtcca cagagtaact actcaaccaa
961 ggaacaaacc tcagactaag tgtcccagtg gagggcagtc ccagggacca cgtggacaat
1021 tcttggatac tgtcttggca gctatgtgtc caatagcaat gctccttact gcagacccag
1081 gcatgcctcc cacctgtctc tggcataccc cacatgcaaa gcacaaagaa catttatcca
1141 tacatctcaa tatggttccc aagtgtgtgc acatgcacgt aacacacaca cacacaaatt
1201 caggtagcag gtacgtgggc aagtatattc tgctcatcaa atggtcattg gctatgtact
1261 ttgtgcaggg aagtacatta tctacagtca caaaaatgtc tcatgggaaa gccttgccag
1321 attcagacac atatatacaa tttcctaacc agcaaggccc ccatacacca tctattccat
1381 aaaccactca ggttacagat gcatgctttc ctatttctaa ctctacacat aaacttttac
1441 tggaagtact cataattgga cattccagca acctgctaca gtccccaccc ttgtgtgtct
1501 tgatacagac acaccaagtt tctgtgcctc tgacccctca cctgtgccaa gatgtttaaa
1561 gtgtgatggt tcaaaattca ttgaaagctc ttttcttgta actcatgaca aagtccgtcc
1621 tcattgccac tgagaggtgt ttaatgtgat ccaagacctc tctgtgaaac attacccccg
1681 caaaccactc agcaaagtgc ctttctccaa gcaagaacaa agagctcttg gtggtgactg
1741 ctagaaaatt atggaagccc actcatttat gtcagtggac tgcaactgtg tacctgtgca
1801 atgtttacag atggaaaggg tgaggagatg ctacacctga gctaggtatc tcctatataa
1861 ccaaagtttc cagcagggaa ggaactagac aatcatcagt gcagtctcac agaaggcaac
1921 actggaagtg atgtcataag gttgtgatgt gtgcacggta tggcacaggt gggatgcaga
1981 ggtaacagag tttaaatgaa agtaggatga agctataaag aggtttattt atatttatat
2041 tgaagctcag gcaagtgcct tgcacacagt aggtacttat aactaactgt ggttactgtt
2101 ggatatgtga tgttgttaag ggtaagcttg taatacctca ccagttctcc ccgagtgatc
2161 ttctcttcta agtgagccca ctaattgctg caatggatga aattgggtgt ttaatgctgg
2221 agagcacatg taggtgacac atgtgccttg aggtatgtga ggacatgtaa attagatcca
2281 cagtgagctg aggagggctt tccccgccag agtgaggttg ggaagcagag ttaatccact
2341 tataggatga actgcttggt atttttattg tattgtgact gtattacaaa gatggacaat
2401 tcactccttg ggagcaagtt atgctctaga agtttattta caaatatgct gggcagctct
2461 cttgaaatat tttcccaagg aagctattct acacagtggc aaaattgcta tctaattaat
2521 aatgtagcta aactatgata tttatagtag caaaaaacta aattctataa gattgcatta
2581 aaggaaagat atattctatt tgctcacttg ggctgcttgg tactcacctg ccctccaggt
2641 gtactttagg cctgtggagg gtgggcattt agtggtgacc cttgcaccag ggttttctaa
2701 cagatgaccc tgtgaatcat aatttaaacc tgcatatatt ttatagccag tcacatttgc
2761 cctctcaccc tatatggcca taaactgcct aagcactcag gcctcccact catcaacccc
2821 tttgaccaga gaaagaagca ctctggttct ctatcccctt gtcacataga gagtttgtca
2881 tggggcctct ggctgtgccc ttcacataac agaatgactt gccatctgcc tgcaccaaac
2941 ccagggatgt ggaagacatc tccccacaac tgccactgct caccaggaca agctgccctt
3001 cctgtctcca cctctcagtc cccctagaat ggatggctgg ggagaggtgg aggctgacag
3061 ctgagacgta gtgtcagata tgatctagga gggcggatca ccgggatccg ggaccataca
3121 agtaacatgg tttccatggc aactgcttgc tcctttgaat taagacagca gtcagttgtc
3181 attgccatga caaggcctct atctccaggc acaatgtccc tgctgtctcc taatccaatg
3241 gacttgctct caccccaggg atgaaacacc cagaaactca cttctcagtc acttccacag
3301 ccgatgactc agaagagcca aacccagaat ggggcctctc ttttccccat cacagactcc
3361 cctgacaacc tttcctggcg taactagagg agtcccagtg caggataggc cctaaacgtt
3421 ttgttaaata aacaggtgca tgaaaggagc ctaaggccat tgttgatatc cactctcttc
3481 tttccacttc cttctcatct ttttctccat gttttatgct tctctgattc cctcttctgc
3541 ctgcaccaga ccagccccag ccctttattc ctctccattt tcactccttc cagcctctgt
3601 ccctgaactg ccactggcaa cccatgggac ctcaggacca gagactgctt gactcatctg
3661 gggagggtaa gttcacgggg gacaaaaaaa tgattcctaa agaagaggct tcctagacca
3721 gcacaggctc gagaaagaca tcccctaggc ctggacttct gagcagcttt agccaggctc
3781 cggacggcag ccagaggagg cctttcccca ttgctccttt ccccattgct caatggattc
3841 catgtttctt tttcttgggg ggagcaggga gggagaaagg tagaaaaatg gcagccacct
3901 ttccaagaaa aatataaagg gtccaagctg tatagtattt gtcagtattt ttttctgtaa
3961 aattcaaaca cacacaaaag aaaaatttat ttaaataaaa tactttgaaa atgaaaagtc
4021 ttgatgtagt cagatggtta ctctcttaac attaggtatt acccccactc agacatcact
4081 cagaaatgat caatgcaggg actctttctg tgacacaaat gtcccagccc tccctggtca
4141 ccgccttcgc catggtagag tcataggtct gaggatgagg aatgtggctg tctcaccctt
4201 gcttgcaaaa cagatggcct tggagaccag actccctcaa aggtgccagc tacaggaaaa
4261 atatactgat gttccttggc aacacttaca gaactttcca tcaatgaggt ccatcaatgg
4321 cttcttaaag gaaaaggggg gaaatagcaa aaacctaagg aagaatggac ctttgagtta
4381 aatccagtgt ttgttgggaa aggagggatc aaaaacctct atagtagcca ctagggcaaa
4441 aactgtgtgt atgtgtgtgt gtaagtgtgt gtacactgtt caatatggtt caatatggta
4501 ccaatagcca catgtgacta tttaaattca ttgcaatgaa ataaaattaa aggtatacta
4561 gctc
//