LOCUS AL049787 2041 bp mRNA linear HUM 15-OCT-2008
DEFINITION Novel human gene mapping to chomosome 13.
ACCESSION AL049787
VERSION AL049787.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2041)
AUTHORS Rhodes S.
JOURNAL Submitted (05-MAY-1999) to the INSDC. E-mail contact:
humquery@sanger.ac.uk
COMMENT This cDNA sequence was assembled from public domain ESTs and single
pass sequencing reads from expressed DNA templates, aligned to the
genomic DNA sequence from the bacterial clone 92M18 (Z73359).
The EST sequences listed match this sequence with an identity
of at least 95% between the coordinates shown.
Further information can be found at
http://www.sanger.ac.uk/HGP/Chr13/
Experimentally determined gene with isoforms 92M18.C13.1
(HS92M181),
92M18.C13.1a (HS92M181A) and 92M18.C13.1c (HS92M181C).
Sanger Centre name : 92M18.C13.1b
FEATURES Location/Qualifiers
source 1..2041
/db_xref="H-InvDB:HIT000250091"
/organism="Homo sapiens"
/chromosome="13"
/map="13q12.3"
/mol_type="mRNA"
/db_xref="taxon:9606"
exon 1..231
/number=1
misc_feature 128..458
/note="matches EST AI279647 from clone IMAGE:1927920"
misc_feature join(128..458,515..607)
/note="matches EST AI378203 from clone IMAGE:2069456"
misc_feature join(134..458,1816..1876)
/note="matches EST AA931559 from clone IMAGE:1570190"
misc_feature 171..231
/note="matches EST AA922057 from clone IMAGE:1543986"
misc_feature 215..458
/note="matches EST AA741313 from clone IMAGE:1356598"
misc_feature join(219..458,522..543)
/note="matches EST AA830633 from clone IMAGE:1353189"
exon 232..359
/number=2
misc_feature join(279..458,515..572)
/note="matches EST AA353983"
exon 360..448
/number=3
exon 449..517
/number=4
exon 518..2041
/number=5
CDS 558..776
/product="hypothetical protein"
/db_xref="H-InvDB:HIT000250091.14"
/db_xref="InterPro:IPR026302"
/db_xref="UniProtKB/TrEMBL:Q9UQP6"
/protein_id="CAB42445.1"
/translation="MKERYEHDVTFHSVLHAEKPSRMNRNQDRNNALPSNNARYWNSY
TEFPNRRAHGGFTNESSYHRRGGCHHGY"
misc_feature join(579..713,697..871,863..987,985..1058,1056..1072)
/note="matches EST AA007301 from clone 429238"
misc_feature complement(644..1110)
/note="matches EST AA776774 from clone 1276637"
misc_feature 1219..1649
/note="matches EST AA488718 from clone 841695"
misc_feature 1360..1649
/note="matches EST AA278464 from clone IMAGE:703448"
misc_feature complement(1511..1648)
/note="matches EST AI434835 from clone IMAGE:2131075"
misc_feature complement(1554..1985)
/note="matches EST N80918 from clone 301370"
misc_feature complement(1585..1988)
/note="matches EST R61510 from clone 37787"
misc_feature complement(1665..1981)
/note="matches EST AA007302 from clone 429238"
misc_feature complement(1665..2041)
/note="matches EST AA988369 from clone IMAGE:1605575"
misc_feature complement(1683..2041)
/note="matches EST AI051820 from clone IMAGE:1648444"
misc_feature complement(1694..2041)
/note="matches EST AA825349 from clone IMAGE:1416311"
misc_feature complement(1696..1982)
/note="matches EST AA989248 from clone IMAGE:1604004"
misc_feature complement(1702..1985)
/note="matches EST Z38606 from clone c-0ic01"
misc_feature complement(1706..1985)
/note="matches EST F02671 from clone c-16e06"
misc_feature complement(1725..1985)
/note="matches EST F03825 from clone c-2bc03"
misc_feature complement(1740..2041)
/note="matches EST AA487590 from clone 841695"
misc_feature complement(1847..2041)
/note="matches EST AA890530 from clone IMAGE:1405621"
misc_feature complement(1899..2041)
/note="matches EST R41970 from clone 32048"
regulatory 2022..2027
/regulatory_class="polyA_signal_sequence"
BASE COUNT 623 a 400 c 417 g 601 t
ORIGIN
1 cgtgacttca gtaaagggaa cccggggctc tcgcagccag ccctcctgcc catggaggac
61 agtttccttc aatcttttgg gaggctgagc ctccagcccc agcagcagca gcagcggcag
121 cggccgcccc ggccgccccc gcgggggtac acctcctcgc cgccacagct ttaggaaaca
181 cctctacctc ctgcgaggcc tcccgggctc cgggaaaact acactggcca gacaattgca
241 gcatgacttt cccagggccc tgattttcag cacggatgat tttttcttca gggaagatgg
301 tgcctatgag ttcaatcctg acttcctgga ggaagctcat gaatggaacc aaaaaagagc
361 aagaaaagca atgaggaatg gcatatcccc cattattatt gataatacca acctccacgc
421 ctgggaaatg aagccctatg cagtcatggt atttcagacc gaacaaaaga atcttttcag
481 gctggaaatg gacatggtag ttttcaggcc agaaatgaag aaacattcat ggtgtctcaa
541 gagaaaaaat ccaccgaatg aaagaacggt atgaacacga tgttactttt cacagtgtgc
601 ttcatgcaga aaagccaagc agaatgaaca gaaaccagga caggaataat gcattgcctt
661 ccaacaatgc cagatactgg aattcctaca cagagtttcc aaaccggagg gcccacggtg
721 gatttacaaa tgagagctcc tatcacagaa ggggcggttg tcaccatgga tattagaggc
781 ctatcttaca gccaggcaga attttcctaa gtcagtttct acttcagttt ttgttatttt
841 ttgttgcatt ttagtcagag ctccaattcc agtgtaaata gctgaactca aaagtttctg
901 agcaaagtca ttatattcac tttcttcacc aaaatttgtt aaagtgcttc tatatgcatg
961 gtctgatgct gggaattctg cagatttgag taaacagtct ctttctctag ggtaagaatt
1021 tgaaaccaaa acttgagaac acacccaaga atatatttac ataggttcat agatgaaata
1081 aagtgtttat attatatata agcttcagta ccatttgctc tgaagtgatc tatttatttt
1141 ttcaggaaat tcatctccat cggtaaagtt gggaaggtgg agagaagtgg tgggggggca
1201 ttgctactta tcaaagtgcc attgctactt tgataatcta tgtatctaaa aatgtgagat
1261 gtgcgactct tatgatactg attttccttt aatgttaata tgccagaaag catacatcta
1321 agggaacatt gtccttcaaa gtagacactt tgggaagtta tttctttatt ttaatgatgt
1381 atcattgtta aaaatgctgt caaatcctta atagctacag gagctactga gggaaatcag
1441 tgtcattatt taaagtcacg ccttgtgttt ttactacttt attcagcagg attaaacctg
1501 aataactttt ggctgttgtg ctaatagtgt aaataaaata agcctgcctt cataaaacac
1561 taacttttaa aaggaataaa cgacttctaa aattatgcct attaacatgt gtaattagtc
1621 ggcagctcaa atgtttggga gtgcaagaaa ttaggcaccc caggatatag gtcatacagg
1681 gatatataaa agccatgctc attacaaaat gagcagttga tgttttatgt ggcattaaga
1741 caatcaagtc ctcacaactc tggaatgtct tcttatactg atgctgaatt tatgaatcca
1801 aattaatttc caacaggttg gaatcagatt taatgtgaga tcatgataga caagaccaca
1861 gaggacgtat gctctatttc ttgttggcca acagcttctt tctaatgttc tgtgaaaaat
1921 tattttaagt gtcttatata atggtgcttt tatggttatt aaaaattgta aatggtatca
1981 catttatatg gatttgtcat tggatctttt tttggttcaa caataaaaaa atttaattac
2041 c
//