LOCUS AL035291 5556 bp mRNA linear HUM 15-OCT-2008
DEFINITION H.sapiens gene from PACs 125H23 and 105D12.
ACCESSION AL035291
VERSION AL035291.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5556)
AUTHORS Rhodes S.
JOURNAL Submitted (06-JAN-1999) to the INSDC. E-mail contact:
humquery@sanger.ac.uk
COMMENT This sequence was generated from cDNA clones isolated using
sequence from the bacterial clones 125H23 (Z94054) and 105D12
(Z96050) and EST data.
The EST sequences listed match this sequence with an identity
of at least 95% between the coordinates shown.
Further information can be found at
http://www.sanger.ac.uk/HGP/Chr1/
Sanger Centre name: dJ125H23.C1.1.
This experimentally determined gene has a CpG island.
FEATURES Location/Qualifiers
source 1..5556
/db_xref="H-InvDB:HIT000250042"
/organism="Homo sapiens"
/chromosome="1"
/map="1q24"
/mol_type="mRNA"
/db_xref="taxon:9606"
exon 1..281
/number=1
CDS 220..3984
/product="hypothetical protein"
/db_xref="GOA:Q9UBS9"
/db_xref="H-InvDB:HIT000250042.15"
/db_xref="HGNC:HGNC:1240"
/db_xref="InterPro:IPR008979"
/db_xref="InterPro:IPR012919"
/db_xref="UniProtKB/Swiss-Prot:Q9UBS9"
/protein_id="CAA22894.1"
/translation="MKKHRRALALVSCLFLCSLVWLPSWRVCCKESSSASASSYYSQD
DNCALENEDVQFQKKDEREGPINAESLGKSGSNLPISPKEHKLKDDSIVDVQNTESKK
LSPPVVETLPTVDLHEESSNAVVDSETVENISSSSTSEITPISKLDEIEKSGTIPIAK
PSETEQSETDCDVGEALDASAPIEQPSFVSPPDSLVGQHIENVSSSHGKGKITKSEFE
SKVSASEQGGGDPKSALNASDNLKNESSDYTKPGDIDPTSVASPKDPEDIPTFDEWKK
KVMEVEKEKSQSMHASSNGGSHATKKVQKNRNNYASVECGAKILAANPEAKSTSAILI
ENMDLYMLNPCSTKIWFVIELCEPIQVKQLDIANYELFSSTPKDFLVSISDRYPTNKW
IKLGTFHGRDERNVQSFPLDEQMYAKYVKMFIKYIKVELLSHFGSEHFCPLSLIRVFG
TSMVEEYEEIADSQYHSERQELFDEDYDYPLDYNTGEDKSSKNLLGSATNAILNMVNI
AANILGAKTEDLTEGNKSISENATATAAPKMPESTPVSTPVPSPEYVTTEVHTHDMEP
STPDTPKESPIVQLVQEEEEEASPSTVTLLGSGEQEDESSPWFESETQIFCSELTTIC
CISSFSEYIYKWCSVRVALYRQRSRTALSKGKDYLVLAQPPLLLPAESVDVSVLQPLS
GELENTNIEREAETVVLGDLSSSMHQDDLVNHTVDAVELEPSHSQTLSQSLLLDITPE
INPLPKIEVSESVEYEAGHIPSPVIPQESSVEIDNETEQKSESFSSIEKPSITYETNK
VNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV
VDSSSLPEVKEEEQSPEDALLRGLQRTATDFYAELQNSTDLGYANGNLVHGSNQKESV
FMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNKTIVKLQNTSRIAEEQD
QRQTEAIQLLQAQLTNMTQLVSNLSATVAELKREVSDRQSYLVISLVLCVVLGLMLCM
QRCRNTSQFDGDYISKLPKSNQYPSPKRCFSSYDDMNLKRRTSFPLMRSKSLQLTGKE
VDPNDLYIVEPLKFSPEKKKKRCKYKIEKIETIKPEEPLHPIANGDIKGRKPFTNQRD
FSNMGEVYHSSYKGPPSEGSSETSSQSEESYFCGISACTSLCNGQSQKTKTEKRALKR
RRSKVQDQGKLIKTLIQTKSGSLPSLHDIIKGNKEITVGTFGVTAVSGHI"
exon 282..396
/number=2
exon 397..507
/number=3
exon 508..662
/number=4
exon 663..800
/number=5
exon 801..951
/number=6
exon 952..1075
/number=7
exon 1076..1200
/number=8
exon 1201..1268
/number=9
exon 1269..1376
/number=10
exon 1377..1482
/number=11
exon 1483..1503
/number=12
exon 1504..1559
/number=13
exon 1560..1651
/number=14
exon 1652..1717
/number=15
exon 1718..1786
/number=16
exon 1787..1877
/number=17
exon 1878..3044
/number=18
exon 3045..3132
/number=19
misc_feature 3113..3500
/note="match: EST N28026"
exon 3133..3237
/number=20
exon 3238..3392
/number=21
misc_feature 3323..3484
/note="match: EST AA481703"
misc_feature 3372..3718
/note="match: EST AA336692"
exon 3393..3484
/number=22
exon 3485..3540
/number=23
exon 3541..5556
/number=24
misc_feature 3755..4174
/note="match: EST AA374971"
misc_feature 3773..4226
/note="match: EST AA235936"
misc_feature 3965..4169
/note="match: EST AA343970"
misc_feature 4104..4368
/note="match: EST AA330203"
misc_feature 4104..4531
/note="match: EST N32686"
misc_feature join(4114..4356,4376..4402)
/note="match: EST H26460"
misc_feature 4160..4338
/note="match: EST N44164"
misc_feature complement(4316..4401)
/note="match: EST AA103178"
misc_feature 4400..4670
/note="match: EST AA373313"
misc_feature join(4515..4695,4719..4949)
/note="match: EST AA278830"
misc_feature join(4692..4749,4784..4890,4890..4922)
/note="match: EST T27279"
misc_feature 4785..4868
/note="match: EST T27289"
misc_feature 4898..5157
/note="match: EST H88063"
misc_feature 5042..5343
/note="match: EST D61948"
misc_feature complement(5087..5554)
/note="match: EST AA974378"
misc_feature complement(join(5092..5117,5146..5556))
/note="match: EST N45113"
misc_feature complement(5093..5554)
/note="match: EST AI203426"
misc_feature complement(join(5104..5366,5363..5556))
/note="match: EST N36176"
misc_feature complement(5117..5556)
/note="match: EST AI142894"
misc_feature complement(5134..5556)
/note="match: EST N22982"
misc_feature complement(5136..5554)
/note="match: EST AI203406"
misc_feature complement(5138..5554)
/note="match: EST AI206281"
misc_feature complement(5146..5556)
/note="match: EST AA864476"
misc_feature complement(5159..5556)
/note="match: EST AI217893"
misc_feature complement(5168..5556)
/note="match: EST AA830836"
misc_feature 5188..5452
/note="match: EST H88718"
misc_feature complement(5191..5556)
/note="match: EST AA236951"
misc_feature complement(5231..5556)
/note="match: EST AA757158"
misc_feature complement(5239..5556)
/note="match: EST AA868446"
misc_feature 5454..5556
/note="match: EST C00478"
regulatory 5531..5536
/regulatory_class="polyA_signal_sequence"
BASE COUNT 1784 a 1008 c 1139 g 1625 t
ORIGIN
1 ccggagtcct gtgaagcgcc cctgtccgcg cctctgtggg gccctcagag agggctgcca
61 ggacgcgagc cactgaggag ccgctcagcc agcgccatag cccttaggac tatcggtcac
121 attctcgcgc tcctgctccg gctcctccat cttggcctcg gcagtggcgg ctgccgggag
181 gatgtgccgc cttctggcag ggggaagaag gaggagaaga tgaagaagca ccggcgggcc
241 ttggccctgg tctcctgcct ctttctgtgc tctctggtct ggcttcccag ctggcgtgta
301 tgttgtaaag agagttcttc agcttcagcg tcatcatatt actctcaaga tgacaactgc
361 gcactagaaa atgaagatgt acaattccag aaaaaggatg aaagagaggg acctatcaat
421 gccgaatcat tgggaaaatc aggttcaaat ttacctattt ctccaaaaga acataaatta
481 aaagatgatt ctattgtgga tgtacaaaat acagagtcaa aaaagttaag tccaccggtg
541 gtggagacac tccctacagt tgatttgcat gaagagtctt ccaatgcagt tgtggacagt
601 gaaactgttg aaaatatttc cagctcatct acctcagaaa tcactccaat ctcaaagctt
661 gatgaaatag aaaaatctgg tactattccg atagccaaac caagtgaaac tgagcagtct
721 gaaactgatt gtgatgttgg tgaggccctt gatgctagtg ctccaattga acaaccttcc
781 tttgtcagtc cacctgacag ccttgttggc cagcatatag aaaatgtatc atcttcacat
841 ggtaaaggaa agataacaaa atcagaattt gaatcaaaag tttcagcaag tgaacagggc
901 ggtggtgatc caaaatctgc attgaatgct tcagataatt taaaaaatga gagctctgat
961 tatacaaaac caggagacat tgaccctaca tcagtagcaa gtcccaaaga tccagaagat
1021 ataccaacat ttgatgaatg gaagaagaaa gttatggaag tagaaaaaga aaaaagtcag
1081 tcgatgcatg catcttctaa tggaggttca catgccacca aaaaggtcca gaaaaatcga
1141 aataattatg cctcagtaga atgtggtgcc aaaattctag cagctaatcc agaagccaag
1201 agcacatctg ctattcttat agaaaatatg gatctttaca tgttgaatcc ttgcagcact
1261 aaaatttggt ttgttattga actttgtgaa ccaattcaag taaaacagct tgatattgca
1321 aattatgaat tattttcttc tactcctaaa gattttctgg tttctatcag tgacagatat
1381 ccaacaaata agtggattaa gctgggtact tttcatggta gagatgagcg gaatgtacag
1441 agtttccctt tagatgaaca gatgtatgca aaatatgtca agatgttcat caagtacata
1501 aaggttgagt tgctatcaca ttttggatca gagcactttt gtccattaag ccttataagg
1561 gtatttggca ctagcatggt ggaagaatat gaagaaattg ctgattccca gtatcactca
1621 gaacgccagg aactatttga tgaggactat gattatccac tggattataa tactggagag
1681 gataaatcct caaaaaatct tcttggttct gctacaaatg ccattctaaa tatggtgaat
1741 attgctgcta atattctggg agcaaaaact gaagacctga cagaaggaaa taaaagtata
1801 tctgagaatg ccactgccac agctgcacct aaaatgcctg aatcaactcc tgtttcaact
1861 cctgttccat ctcctgagta tgtaaccact gaagtacaca cacatgacat ggagccgtca
1921 acaccagata ctccaaaaga gagtcccatt gtacagttag ttcaagagga ggaagaggag
1981 gcaagtccat ctacagtgac ccttctgggc agcggtgaac aggaagatga atcatcaccc
2041 tggtttgagt cagagacaca aatattttgc agtgaactga ccacaatttg ttgtatttct
2101 agtttttcag aatacatata taaatggtgt tcagttagag ttgctcttta tcggcagcgc
2161 agccgaactg ctttgagtaa aggaaaagat tatcttgtgt tagctcaacc acccttacta
2221 cttcctgcgg aatcagtaga tgtttcagta ttgcaacctc tgagtggaga attggaaaat
2281 acgaatatag aaagggaagc tgaaactgtt gttctgggtg atttaagtag tagtatgcac
2341 caggatgact tggtgaatca cactgtagat gcagttgaac ttgaaccaag ccattctcaa
2401 actctttctc agtctcttct tttagatatt accccagaaa tcaatccctt gcctaaaata
2461 gaagtatctg agtctgttga atatgaggca ggacatatac catcaccagt gattccccaa
2521 gagagttctg ttgagatcga taatgaaaca gaacaaaagt ctgagagctt tagttctata
2581 gagaaaccat ctattaccta tgaaacaaat aaagttaatg agttaatgga taatattata
2641 aaagaagatg tgaactccat gcaaattttc acaaagctgt ctgaaacaat agtgccacca
2701 ataaatacag ccactgtacc cgacaatgaa gatggggaag ccaaaatgaa tatagctgac
2761 acagcaaagc aaactttgat ttctgttgtg gattcttctt cattacctga agtaaaagaa
2821 gaagaacagt ctccagaaga tgcccttttg agagggttac agaggacagc tacagatttt
2881 tatgctgaat tgcaaaattc tacagatcta ggatatgcta atggaaatct tgtacatgga
2941 tcaaaccaaa aggagtcagt atttatgaga cttaataatc gtattaaagc cttagaagtt
3001 aacatgtctc tcagtggtcg ctatctggag gagcttagcc aaaggtaccg aaaacaaatg
3061 gaagaaatgc aaaaggcttt caataaaaca atcgtgaaac ttcagaatac ttcaagaata
3121 gcagaggagc aggatcagcg gcaaactgaa gccatccagt tgctacaggc acagctgacc
3181 aacatgacac agcttgtttc aaatttatca gcaacagtag cagaattgaa acgggaggtt
3241 tcagatcgac aaagctatct tgtcatatct ttggttcttt gtgttgtctt gggactgatg
3301 ctttgtatgc agcgttgtcg aaatacttct caatttgatg gagattatat ttcaaaactt
3361 cctaaaagta atcagtatcc aagccctaaa aggtgtttct cttcctatga tgatatgaat
3421 ttgaaaagaa gaacttcatt cccactcatg agatccaagt ctctacagtt aactggcaaa
3481 gaagtagacc caaatgattt gtacattgta gaacccctca agttttctcc agaaaagaag
3541 aagaagcgct gcaagtacaa aattgaaaaa attgagacca taaagcctga agaaccattg
3601 caccccatag ccaatggcga cataaaagga agaaagccct ttacgaacca gagagatttt
3661 tctaatatgg gagaagttta tcactcttct tataaaggtc ctccatctga aggaagctca
3721 gaaacttcat cacagtcaga agagtcctat ttttgtggca tttcagcttg cacaagtctg
3781 tgcaatggac agtctcaaaa gacaaaaact gagaagaggg ctttaaaacg aagacgatct
3841 aaagtccaag accaaggaaa attgataaaa actctaatac agactaagtc gggatcattg
3901 ccgagcctgc atgacataat caaaggaaac aaagagatca ccgtgggaac atttggtgtt
3961 acagcagtct cgggacatat ctaaaattaa ttgaactttt catacagaag acttttttgt
4021 tgttgttctt tgaagaacag tctgtagtat ttgaagggtt tgggggaggg agaaaatatt
4081 aatgggaaag gcattcagaa attatggttt ctaccttttt aaaaagtaga tgggattgtg
4141 tcaatcttgg ttaatgagct acagttttac aaagctgatc acttcctata aggacaatgg
4201 tagacatttt ataaagatgt tttttcacaa gattaattac tgggacaaaa gtaatttgga
4261 agcccagttc cttaggtggg ataggaatga aagcctaaac ctcttccttt agctttgttc
4321 ctatttcttg caccttccca tatttatgtg ccttttgtct atttataatg ccactggaag
4381 aggagggata actttttctg ttatttgatt tcttttataa ctttgttagg tttttgaagc
4441 tgcaaacact acaatgcttt gagggggtct gtgcctgaag ctcaggagtg tggatcagac
4501 agtctaaaga tcctaaaaac ttgccaactg gatctttgtt tagcaaactc actggaaatg
4561 aacacttaat ggaattttta agtctgttct gttaggtaga tggtgatgct cttgttattt
4621 tcacttattc agactggatt acttcttact tagttactaa ctcaatgagg aaaaatccct
4681 acaggatctt tttttgcaaa caactgatat atgcagacaa atttttgaca aattcacctt
4741 ttaaacacac ttaaccattt gtgaaggttt tctttagctt acattttaaa catacacaat
4801 aaacactaat cctccaaact ttcactgttt ttattagtat gaatataaaa tttgaaggtt
4861 tggccaatta gtacaagtct catgatataa tcactgcctg catacatatg cacagatcca
4921 gttagtgagt ttgtcaagct taatctaatt ggttaagtct aaagagatta ttattccttg
4981 atgtttgctt tgtattggct acaaatgtgc agaggtaata catatgtgat gtcgatgtct
5041 ctgtcttttt ttttgtcttt aaaaaataat tggcagcaac tgtatttgaa taaaatgatt
5101 tcttagtatg attgtacagt aatgaatgaa agtggaacat gtttcttttt gaaagggaga
5161 gaattgacca tttattgttg tgatgtttaa gttataactt attgagcact tttagtagtg
5221 ataactgttt ttaaacttgc ctaatacctt tcttgggtat tgtttgtaat gtgacttatt
5281 taacgccttt tttgtttgtt taagttgctg ctttaggtta acagcgtgtt ttagaagatt
5341 taaatttctt tcctgtctgc acaattagct attcagagca agagggcctg attttataga
5401 agccccttga aaagaggtcc agatgagagc agagatacag tgagaaatta tgtgatctgt
5461 gtgttgtggg aagagaattt tcaatatgta actacggagc tgtagtgcca ttagaaactg
5521 tgaatttcca aataaatctg aacacttgtc tttatt
//