LOCUS AL021708 2233 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens partial cDNA homologous to M.musculus JIP-1 gene.
ACCESSION AL021708
VERSION AL021708.1
KEYWORDS JIP-1 gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2233)
AUTHORS Smink L.J., Burton J.
JOURNAL Submitted (20-JAN-1998) to the INSDC. E-mail contact:
humquery@sanger.ac.uk Clone requests:clonerequest@sanger.ac.uk
COMMENT This sequence was generated from a cDNA clone isolated using
sequence from the BAC clone CIT987SK-384D8 sequenced by
The Institute for Genomic Research(U62317).
Exon numbers stated derived by comparison to M.musculus JIP-1
gene sequence : AF003115. Further information
can be found at http://www.sanger.ac.uk/HGP/Chr22/
All matches to EMBL sequences shown 90% or more.
FEATURES Location/Qualifiers
source 1..2233
/db_xref="H-InvDB:HIT000250033"
/organism="Homo sapiens"
/chromosome="22"
/map="q13"
/mol_type="mRNA"
/clone="U56K21"
/tissue_type="monocyte"
/db_xref="taxon:9606"
exon <1..903
/number=5
mRNA <1..>2233
/product="hypothetical protein"
CDS 209..1612
/db_xref="GOA:Q13387"
/db_xref="H-InvDB:HIT000250033.13"
/db_xref="HGNC:HGNC:6883"
/db_xref="InterPro:IPR001452"
/db_xref="InterPro:IPR006020"
/db_xref="InterPro:IPR011993"
/db_xref="InterPro:IPR035637"
/db_xref="UniProtKB/Swiss-Prot:Q13387"
/protein_id="CAA16714.1"
/translation="MISEGSSPIRCPGQCLSPAPRPPGEPVSPAGGAAQDSQDPEAAA
GPGGVELVDMETLCAPPPPAPAAPRPGPAQPGPCLFLSNPTRDTITPLWAAPGRAARP
GRACSAACSEEEDEEDDEEEEDAEDSAGSPGGRGTGPSAPRDASLVYDAVKYTLVVDE
HTQLELVSLRRCAGLGHDSEEDSGGEASEEEAGAALLGGGQVSGDTSPDSPDLTFSKK
FLNVFVNSTSRSSSTESFGLFSCLVNGEEREQTHRAVFRFIPRHPDELELDVDDPVLV
EAEEDDFWFRGFNMRTGERGVFPAFYAHAVPGPAKDLLGSKRSPCWVERFDVQFLGSV
EVPCHQGNGILCAAMQKIATARKLTVHLRPPASCDLEISLRGVKLSLSGGGPEFQRCS
HFFQMKNISFCGCHPRNSCYFGFITKHPLLSRFACHVFVSQESMRPVAQSVGRAFLEY
YQEHLAYACPTEDIYLE"
misc_feature 542..574
/note="match: 5' EST W41873 clone 353471"
misc_feature join(816..833,830..1167,1166..1220)
/note="match: 5' EST T32933 clone 183939"
misc_feature 900..1146
/note="match: 5' EST Z43824 clone c-1lg04"
exon 904..979
/number=6
misc_feature join(930..948,959..986,986..1091,1094..1166,1164..1281)
/note="match: 5' EST T78842 clone 23959"
exon 980..1152
/number=7
misc_feature 1004..1316
/note="match: 5' EST AA324906 clone 192685"
exon 1153..1262
/number=8
exon 1263..1370
/number=9
misc_feature join(1268..1508,1503..1553)
/note="match: 5' EST AA323678 clone 281387"
misc_feature join(1311..1549,1546..1587,1582..1638)
/note="match: 5' EST H38480 clone 192685"
misc_feature 1321..1508
/note="match: 5' EST R87578 clone 166137"
misc_feature join(1322..1549,1546..1660,1658..1727)
/note="match: 5' EST H30298 clone 183939"
misc_feature join(1352..1469,1465..1525,1526..1549,1546..1570,
1581..1618,1618..1646,1680..1727)
/note="match: 5' EST AA505001 clone 839760"
misc_feature join(1363..1389,1388..1525,1546..1587,1582..1667)
/note="match: 5' EST N53101 clone 281387"
misc_feature join(1365..1587,1582..1666)
/note="match: 5' EST AA322904 clone 839760"
misc_feature join(1365..1607,1606..1634)
/note="match: 5' EST AA323084 clone 281387"
misc_feature join(1365..1587,1582..1627)
/note="match: 5' EST AA323104 clone 281387"
misc_feature 1368..1442
/note="match: 3' EST AA666239 clone 859098"
exon 1371..1441
/number=10
misc_feature complement(join(1478..1589,1386..1478))
/note="match: 3' EST AA351451 clone IMAGE:964182"
misc_feature join(1399..1574,1573..1680)
/note="match: 5' EST AA323870 clone 281387"
exon 1442..1540
/number=11
exon 1541..>2233
/number=12
misc_feature 1626..1842
/note="match: 3' EST AA324271 clone IMAGE:964182"
misc_feature 1743..2063
/note="match: 5' EST R76018 clone 159021"
misc_feature join(1743..1969,1986..2060)
/note="match: 5' EST R83813 clone 186661"
misc_feature join(1747..2095,2093..2116)
/note="match: 5' EST R22305 clone 130843"
misc_feature complement(join(2109..2178,1974..2009))
/note="match: 3' EST R88296 clone 166137"
misc_feature complement(join(2109..2233,1986..2009))
/note="match: 3' EST H38446 clone 192685"
misc_feature complement(join(2109..2178,1992..2018))
/note="match: 3' EST H41254 clone 192535"
misc_feature complement(2017..2223)
/note="match: 3' EST AA507924 clone IMAGE:964182"
misc_feature 2051..2102
/note="match: 5' EST AA033504 clone 466371"
misc_feature complement(2109..2178)
/note="match: 3' EST R22306 clone 130843"
/note="match: 3' EST Z39890 clone c-1lg04"
misc_feature complement(2124..2178)
/note="match: 3' EST T16799 clone c-1lg04"
BASE COUNT 339 a 762 c 723 g 409 t
ORIGIN
1 ccgctcctcg cacctcacca actccatcga ggaggcctcg tcgcccgcct cggagccgga
61 gcccccgcgc gaacccccgc gccgccccgc cttcctgccc gtgggccccg acgacaccaa
121 cagcgagtac gagtcggggt cggagtcgga gccggacctc agcgaggacg cggactcgcc
181 ctggctgctc agcaacctgg tgagccgcat gatctccgag ggctcctcgc ccatccgctg
241 ccccggccag tgcctgtctc ctgcgccgcg cccgcccggg gagcccgtgt cgccggccgg
301 cggggccgcc caggactccc aggaccccga ggcggccgcg gggcccggcg gcgtggagct
361 ggtggacatg gagacgctgt gcgcgccgcc gccgcccgcg cccgccgcgc ctcgacccgg
421 ccccgcgcag cccgggcctt gcctattcct cagcaacccc acgcgtgaca ccatcacgcc
481 gctgtgggcc gcgcccggcc gcgccgcccg cccgggacga gcctgctccg ccgcctgctc
541 cgaggaggag gacgaagagg acgacgagga agaggaggat gccgaggaca gtgcggggtc
601 ccccgggggc aggggcacgg gcccctcggc gccgcgggac gcgtcgctgg tgtacgacgc
661 ggtcaagtac acgctggtgg tggatgaaca cacgcagctg gagctggtga gcctgcggcg
721 ctgtgctggg ctgggccacg acagcgaaga ggacagcggc ggggaggcca gcgaggagga
781 ggcgggcgcg gcgctgctag gcggcggtca ggtctcgggg gacacctcgc cggacagccc
841 tgacctcact ttctccaaga agttcctcaa tgtcttcgtc aacagcacat ctcggtcctc
901 cagcaccgag tcctttggcc ttttctcctg tctggtcaac ggcgaggagc gagagcagac
961 tcaccgggct gtgttcaggt tcatcccgcg gcatccagac gagctggagc tggatgtgga
1021 tgaccctgtg ttggtggagg ccgaggagga cgacttctgg ttccgtggct tcaacatgcg
1081 cacgggggag cgcggtgtgt ttcctgcctt ctacgcccat gcggtgcccg gccctgccaa
1141 ggacctgctg gggagtaagc ggagcccctg ctgggtggag cgctttgacg tgcagttcct
1201 gggctccgtg gaggtgccct gccaccaggg caacggcatc ctgtgtgcag ccatgcagaa
1261 gattgccact gcccggaaac tgaccgtcca cctgcgccct cctgcctcct gtgacctcga
1321 gatctctctt cggggggtca agctgagtct gagcggagga gggcctgagt tccagcgctg
1381 cagccatttc ttccagatga agaacatctc cttctgcggc tgccatcccc gcaacagctg
1441 ctatttcggc ttcatcacca aacaccccct gctgagccgc ttcgcctgcc acgtctttgt
1501 ctcccaggag tccatgaggc cggtggcgca gagtgtgggc cgcgccttcc tggagtacta
1561 ccaagagcac ctggcgtacg cctgccccac ggaggacatc tacctggagt agcctgccca
1621 ccgctctgtc tcctggccgt ctgctccagg cgcagctggg gctgaggatg tctcaagagg
1681 ccaccatggc tttggcaagg actggattgg ggggacatgg gaccttacgc ttgtgggggt
1741 ctgcgggctg ggaactctcg tcctcggtcc ccagggcgca gctgttgggg ctgcggggga
1801 gtggagcccc cgtgcccctg cttttcctca gatccgttct ttctctgtgt tgtcctcctc
1861 cttcccttcc cagtctccct tttctctctc ctggtgtctc tgcccctctc tgtgcctgca
1921 aaccttatcc tctattcttc actttggggt cagaacttcg ggggtgtgga ggaggtgcgg
1981 ctctagggac aggtaatgtc ggcttccaag tgatgccctc ctgccactcc cctgcgattt
2041 ataagggaat tttaattttt atagtgaatc tcaagggatc atcccatcct tgaccacagg
2101 gacaagacgg gccccctcgc cccagcccca ccccacatgg agctcagggg gaagcaggga
2161 ggggttccca aaagagccct gcggaggcta ggagtggttc ttgatgctca cctgaagccc
2221 ctagacgctg cta
//