LOCUS AK316592 3899 bp mRNA linear HTC 24-MAY-2008 DEFINITION Homo sapiens cDNA, FLJ95940, highly similar to Homo sapiens TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa (TAF2), mRNA. ACCESSION AK316592 VERSION AK316592.1 KEYWORDS HTC; HTC_FLI; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3899) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (08-FEB-2008) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K., Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T., Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S., Goshima,N., Nomura,N. and Isogai,T. TITLE NEDO functional analysis of protein and research application project JOURNAL Unpublished (2008) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC and Biological Information Research Center (BIRC), AIST; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3899 /clone="TRACH3031491" /clone_lib="TRACH3" /db_xref="H-InvDB:HIT000434803" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="trachea" CDS 300..3899 /note="highly similar to Homo sapiens TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa (TAF2), mRNA" /protein_id="BAG38179.1" /translation="MPLTGVEPARMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKS VVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHSESKQRN LNYFSNAYAAAVSAVDPDAGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLH FVVPSVEGSMAERGAHVFSCGYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNG DLVETVYTHDMRKKTFHYMLTIPTAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPL LKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAM IIDETPLTRRCLAQSLAQQFFGCFISRMSWSDEWVLKGISGYIYGLWMKKTFGVNEYR HWIKEELDKIVAYELKTGGVLLHPIFGGGKEKDNPASHLHFSIKHPHTLSWEYYSMFQ CKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSIS NVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQDYTSPGTQKYVGPLKV TVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEEVDMDLSAMDADSP LLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALEKFPTPASRLALT DILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCKSCPNIVKTNN FMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKNKFSDNYYRAEM IDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTITVSCLR AIRVLQKNGHVPSDPALFKSYAEYGHFVDIRIAALEAVVDYTKVDRSYEELQWLLNMI QNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRLRCGAV DLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPESVAGNQEAANNPSSHPQL VGFQNPFSSSQDEEEIDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPASSRSALIPQ HSAGCDSTPTTKPQWSLELARKGTGKEQAPLEMSMHPAASAPLSVFTKESTASKHSDH HHHHHHEHKKKKKKHKHKHKHKHKHDSKEKDKEPFTFSSPASGRSIRSPSLSD" BASE COUNT 1171 a 782 c 867 g 1079 t ORIGIN 1 acttccgctg acgtcggagg tcagaggtta cagacaagat gtcggcggat ggtagcttcg 61 agcccttgcg gagaggagca tctctgtgac agaagcttgt cgacggcggc ttctaggagc 121 tagtcgaagg agcgaggttg aggcgggcag cgacccgtca ggtcgctcac ctgggcaccg 181 gccagctgcg agacgtgact tggggaccgc aggggagtgg agagtgtgag gtgccaaaga 241 ctagtaatgc cccgtatccc cctaggaagc cgggaagcca agctccgcgg gaccgcttca 301 tgccgctgac tggtgtagag cccgccagaa tgaacaggaa gaaaggagac aagggctttg 361 aaagcccaag gccatataaa ttaacccatc aggtcgtctg catcaacaac ataaatttcc 421 agagaaaatc tgttgtggga tttgtggaac tgactatatt tcccacagtt gcaaacttga 481 atagaatcaa gttgaacagc aaacagtgta gaatataccg agtaaggatc aatgatttag 541 aggctgcttt tatttataat gacccaacct tggaagtttg tcacagtgaa tcaaaacaga 601 gaaacctcaa ttatttttcc aatgcttatg cagctgcagt tagtgctgtg gaccctgatg 661 caggaaatgg agaactttgc attaaggttc catcagagct atggaaacac gttgatgagt 721 taaaggtcct gaagatacac atcaattttt ctttggatca gcccaaagga ggtcttcatt 781 ttgtggtacc cagtgtagag ggaagtatgg cagagagagg tgctcatgtt ttctcttgtg 841 ggtatcaaaa ttctacaaga ttttggttcc cttgtgttga ttcatactct gaattgtgta 901 catggaaatt agaatttaca gtagatgctg caatggttgc tgtttctaat ggcgatttgg 961 tggagacagt gtatactcat gatatgagga agaaaacttt ccattatatg cttaccattc 1021 ctacagcagc gtcaaatatc tccttggcca ttggaccatt tgaaatactg gtagatccat 1081 acatgcatga ggttactcat ttttgtttgc cccaacttct tccattgctg aaacatacca 1141 catcatacct tcatgaagtc tttgaatttt atgaagaaat tcttacatgt cgttacccat 1201 actcctgttt taagactgtc ttcattgatg aggcttatgt tgaagtggct gcttatgctt 1261 ccatgagcat ttttagcaca aatcttttac acagtgccat gattatagat gagacacctt 1321 tgactagaag gtgtttagcc caatccttgg cccagcagtt ttttggttgt ttcatatcta 1381 gaatgtcttg gtctgatgaa tgggtgctga agggaatttc aggctatatc tatggacttt 1441 ggatgaaaaa aacttttggt gttaatgagt accgccattg gattaaagag gagctagaca 1501 aaatagtggc atatgaacta aaaactggtg gggttttact acatcccata tttggtggag 1561 gaaaagagaa ggataatccg gcttcccatc tacacttttc aataaagcat ccacatacac 1621 tgtcctggga atactacagt atgtttcagt gtaaagccca ccttgtgatg agattgattg 1681 aaaataggat cagtatggaa tttatgctac aagttttcaa taaactgcta agtctggcta 1741 gtactgcttc atctcagaag ttccagtcac atatgtggag tcagatgttg gtttccacat 1801 ctgggttttt gaaatccatt tcaaatgtct ctggcaaaga tattcagccg ttaataaagc 1861 agtgggtaga tcagagtgga gtggtaaaat tttatggaag ttttgcattt aatagaaaac 1921 gaaatgtctt ggaactggaa ataaaacagg actatacatc tcctggaact cagaaatacg 1981 tgggaccact taaagtgaca gtgcaggagt tagatggatc cttcaatcat acactgcaaa 2041 ttgaagaaaa cagccttaaa catgatatac cctgccattc caaaagtaga aggaataaaa 2101 agaaaaaaat cccactgatg aatggagaag aagttgatat ggatctttct gcaatggatg 2161 ctgattcccc tttgctgtgg ataaggatag acccagatat gtcagtattg aggaaggtag 2221 aatttgagca agctgatttt atgtggcagt atcagctccg ctatgagaga gatgttgttg 2281 cacagcagga atccattttg gctttggaaa aattccctac tccagcatct cggcttgcac 2341 tcactgatat attagaacaa gagcagtgtt tctacagagt aagaatgtca gcttgcttct 2401 gtcttgcaaa gattgcaaat tcaatggtga gcacatggac aggaccacca gccatgaagt 2461 cactcttcac taggatgttt tgttgtaaaa gttgtccaaa catcgtgaaa acaaacaact 2521 ttatgagctt tcaaagctat tttctacaga agactatgcc agttgcaatg gctttattaa 2581 gagatgttca taatctttgt cctaaagaag tcttaacatt tattttagac ttaatcaagt 2641 acaatgacaa caggaaaaat aagttttcag ataactatta tcgtgcagaa atgattgatg 2701 ccctggccaa ctctgttaca cctgcagtca gtgtgaataa tgaagttaga actttggata 2761 acttaaatcc tgatgtgcga ctcattcttg aagaaatcac cagatttttg aatatggaaa 2821 aacttcttcc gagttacagg cataccatca ctgtcagttg tttgagagcc atacgggtac 2881 ttcagaagaa cggacatgtg ccaagtgatc cagctctttt taaatcttat gctgaatatg 2941 gccactttgt ggacattagg atagcagctt tggaagcagt tgttgattat actaaagtgg 3001 acagaagtta tgaagaactg caatggctac ttaatatgat tcagaatgac cctgtaccct 3061 atgtaaggca taagattctc aacatgttga ctaagaaccc accatttact aagaacatgg 3121 agtctccctt atgcaatgaa gccctggtag atcaactttg gaaacttatg aattctggta 3181 cttcacatga ctggaggtta cggtgtggtg ctgtggactt gtacttcaca ctttttggcc 3241 tcagtagacc ttcctgttta cccttgccag agcttgggtt ggttcttaat ctaaaggaga 3301 aaaaagctgt cttgaatcct accataattc cagagtcagt agcaggcaac caagaagctg 3361 caaataatcc aagcagtcac ccacagctag ttggatttca gaaccctttt tccagttctc 3421 aagatgagga ggagattgat atggatactg ttcatgatag ccaggccttc atttcccatc 3481 atttaaacat gcttgaaagg ccgtcaactc cagggctctc gaaatatcgg ccagctagct 3541 cccgatctgc tttaataccc cagcactcag caggctgtga cagcacaccc accacaaaac 3601 cccagtggag tttggaactt gcacggaagg gaacaggtaa agaacaagca cctttggaga 3661 tgagtatgca tccagcggca agcgctccac tctcagtctt tactaaggaa tctacagcct 3721 ccaaacacag tgaccaccat caccaccatc accatgagca caagaaaaag aagaagaagc 3781 ataaacataa gcacaaacac aagcataagc atgacagtaa agaaaaggac aaggagcctt 3841 tcactttctc cagccctgcc agtggcaggt ctattcgttc tccttccctt tcagactga //