LOCUS AK316563 1457 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ92897, Homo sapiens protein tyrosine
phosphatase, non-receptor type 1 (PTPN1), mRNA.
ACCESSION AK316563
VERSION AK316563.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1457)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (08-FEB-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1457
/clone="CTONG2001457"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000434774"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 150..1457
/note="Homo sapiens protein tyrosine phosphatase,
non-receptor type 1 (PTPN1), mRNA"
/protein_id="BAG38152.1"
/translation="MEMEKEFEQIDKSGSWAAIYQDIRHEASDFPCRVAKLPKNKNRN
RYRDVSPFDHSRIKLHQEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQ
KSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLEL
ENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAG
IGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIE
GAKFIMGDSSVQDQWKELSHEDLEPPPEHIPPPPRPPKRILEPHNGKCREFFPNHQWV
KEETQEDKDCPIKEEKGSPLNAAPYGIESMSQDTEVRSRVVGGSLRGAQAASPAKGEP
SLPEKDEDHALSYWKPFLVNMCVATVLTAGAYLCYRFLFNSNT"
BASE COUNT 404 a 365 c 403 g 285 t
ORIGIN
1 gacatgaaga agcagcagcg gctagggcgg cggtagctgc aggggtcggg gattgcagcg
61 ggcctcgggg ctaagagcgc gacgctggcc tagagcggca gacggcgcag tgggccgaga
121 aggaggcgca gcagccgccc tggcccgtca tggagatgga aaaggagttt gagcagatcg
181 acaagtccgg gagctgggcg gccatttacc aggatatccg acatgaagcc agtgacttcc
241 catgtagagt ggccaagctt cctaagaaca aaaaccgaaa taggtacaga gacgtcagtc
301 cctttgacca tagtcggatt aaactacatc aagaagataa tgactatatc aacgctagtt
361 tgataaaaat ggaagaagcc caaaggagtt acattcttac ccagggccct ttgcctaaca
421 catgcggtca cttttgggag atggtgtggg agcagaaaag caggggtgtc gtcatgctca
481 acagagtgat ggagaaaggt tcgttaaaat gcgcacaata ctggccacaa aaagaagaaa
541 aagagatgat ctttgaagac acaaatttga aattaacatt gatctctgaa gatatcaagt
601 catattatac agtgcgacag ctagaattgg aaaaccttac aacccaagaa actcgagaga
661 tcttacattt ccactatacc acatggcctg actttggagt ccctgaatca ccagcctcat
721 tcttgaactt tcttttcaaa gtccgagagt cagggtcact cagcccggag cacgggcccg
781 ttgtggtgca ctgcagtgca ggcatcggca ggtctggaac cttctgtctg gctgatacct
841 gcctcttgct gatggacaag aggaaagacc cttcttccgt tgatatcaag aaagtgctgt
901 tagaaatgag gaagtttcgg atggggctga tccagacagc cgaccagctg cgcttctcct
961 acctggctgt gatcgaaggt gccaaattca tcatggggga ctcttccgtg caggatcagt
1021 ggaaggagct ttcccacgag gacctggagc ccccacctga gcatatcccc ccacctcccc
1081 ggccacccaa acgaatcctg gagccacaca atgggaaatg cagggagttc ttcccaaatc
1141 accagtgggt gaaggaagag acccaggagg ataaagactg ccccatcaag gaagaaaaag
1201 gaagcccctt aaatgccgca ccctacggca tcgaaagcat gagtcaagac actgaagtta
1261 gaagtcgggt cgtgggggga agtcttcgag gtgcccaggc tgcctcccca gccaaagggg
1321 agccgtcact gcccgagaag gacgaggacc atgcactgag ttactggaag cccttcctgg
1381 tcaacatgtg cgtggctacg gtcctcacgg ccggcgctta cctctgctac aggttcctgt
1441 tcaacagcaa cacatag
//