LOCUS AK316534 1909 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79433 complete cds, highly similar to
Squalene synthetase (EC 2.5.1.21).
ACCESSION AK316534
VERSION AK316534.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1909)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1909
/clone="UTERU2011631"
/clone_lib="UTERU2"
/db_xref="H-InvDB:HIT000500147"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="uterus"
CDS 406..1404
/codon_start=1
/note="highly similar to Squalene synthetase (EC
2.5.1.21)"
/protein_id="BAH14905.1"
/transl_table=1
/translation="MTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTIS
LEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLF
SASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGD
FAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAAC
YNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ
IISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLTTLSQVTEDYVQTGEH"
BASE COUNT 491 a 409 c 433 g 576 t
ORIGIN
1 cttggcagct gaacctgcct gtgagcaggt cgtgtatttc tcggcttccc ttatccaact
61 ttgcatttct atttctagca tattgggttg attcttttga agctgcctct gtgcagatta
121 cacccatgaa cttagacccg ttgcctttat gtatgatcgt atttatactg agaagttact
181 gtgttttttg actttctttt ctatttgcta catattagtt cggtctaaac gtttggtctt
241 ctggtctcca tagttctaca ttggttaaat gcaactcact tctgggagta gtggtgacat
301 tcaactagta ggctttttaa taaactacag aagttcatta ctctcatcaa cgcagtgtgc
361 atattttatc tggttctccg agctctggac acactggaag atgacatgac catcagtgtg
421 gaaaagaagg tcccgctgtt acacaacttt cactctttcc tttaccaacc agactggcgg
481 ttcatggaga gcaaggagaa ggatcgccag gtgctggagg acttcccaac gatctccctt
541 gagtttagaa atctggctga gaaataccaa acagtgattg ccgacatttg ccggagaatg
601 ggcattggga tggcagagtt tttggataag catgtgacct ctgaacagga gtgggacaag
661 tactgccact atgttgctgg gctggtcgga attggccttt cccgtctttt ctcggcctca
721 gagtttgaag accccttagt tggtgaagat acagaacgtg ccaactctat gggcctgttt
781 ctgcagaaaa caaacatcat ccgtgactat ctggaagacc agcaaggagg aagagagttc
841 tggcctcaag aggtttggag caggtatgtt aagaagttag gggattttgc taagccggag
901 aatattgact tggccgtgca gtgcctgaat gaacttataa ccaatgcact gcaccacatc
961 ccagatgtca tcacctacct ttcgagactc agaaaccaga gtgtgtttaa cttctgtgct
1021 attccacagg tgatggccat tgccactttg gctgcctgtt ataataacca gcaggtgttc
1081 aaaggggcag tgaagattcg gaaagggcaa gcagtgaccc tgatgatgga tgccaccaat
1141 atgccagctg tcaaagccat catatatcag tatatggaag agatttatca tagaatcccc
1201 gactcagacc catcttctag caaaacaagg cagatcatct ccaccatccg gacgcagaat
1261 cttcccaact gtcagctgat ttcccgaagc cactactccc ccatctacct gtcgtttgtc
1321 atgcttttgg ctgccctgag ctggcagtac ctgaccactc tctcccaggt aacagaagac
1381 tatgttcaga ctggagaaca ctgatcccaa atttgtccat agctgaagtc caccataaag
1441 tggatttact ttttttcttt aaggatggat gttgtgttct ctttattttt ttcctactac
1501 tttaatccct aaaagaacgc tgtgtggctg ggacctttag gaaagtgaaa tgcaggtgag
1561 aagaacctaa acatgaaagg aaagggtgcc tcatcccagc aacctgtcct tgtgggtgat
1621 gatcactgtg ctgcttgcgg ctcatggcag agcattcagt gccacggttt aggtgaagtc
1681 gctgcatatg tgactgtcat gagatcctac ttagtatgat cctggctaga atgataatta
1741 aaagtattta atttgaagca ccatttgaat gttcgtaata gtagaaaatg atgtgaattt
1801 tctttctgtt cggctcctat ttttctcatc attttgtttt ctttaattgg gttgaatgga
1861 gtagatagaa atatttatgg tttaggtaac agttagatgt ttcctaaga
//