LOCUS AK316505 1565 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79404 complete cds, highly similar to
Sorting nexin-19.
ACCESSION AK316505
VERSION AK316505.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1565)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1565
/clone="TRACH3005752"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000500118"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 641..1339
/codon_start=1
/note="highly similar to Sorting nexin-19"
/protein_id="BAH14876.1"
/transl_table=1
/translation="MSAMESFIEKQTKLLEMQPTKAPEKDPEQPPKGRVDSCVSDAAV
PAQDPSNSDPGTETELADTALDLLLLLLTEQWKWLCTENMQKFLRLIFGTLVQRWLEV
QVANLTSPQRWVQYLRLLQESIWPGGVLPKFPRPVRTQEQKLAAEKQALQSLMGVLPD
LVVEILGVNKCRLSWGLVLESLQQPLINRHLIYCLGDIILEFLDLSASVEESAATTSA
SDTPGNSKRMGVSS"
BASE COUNT 381 a 406 c 413 g 365 t
ORIGIN
1 acacaggccc ggctgcggag cgcagtcgcc caggtttacg gcggcagagg gccgaggctc
61 ccggagagga ccgcgatgag tccacttcag gtcggggctg agtgtgggcg cgcggttccc
121 ggcggcgtgt gacccagtct tcgccggccg ctgcccgctg cgtgttacga gacagccctt
181 gacggtgaaa acagcagcgg cctgcagcag ctggcctacc acactgtgaa tcgtcgctat
241 cgggagttct tgaatctgca gacccgtctg gaggagaaac cagatctacg aaagttcatc
301 aaaaatgtga agggtcctaa aaagctcttt ccagatcttc catttggaaa catggacagt
361 gacagagtag aagcccgtaa gagcctccta gaatcattcc taaagcaact ctgtgccatt
421 ccagagatcg ctaacagtga ggaggtgcag gagttccttg ctctgaacac agatgctcgt
481 attgcctttg tcaagaaacc atttatggtc tctagaatag acaaggtcca ggctgaggtt
541 ctcatccagt aaaatttctc cagcactaag tgcgactgaa gcacaagaca agattcttta
601 ttgtctccag gaaggcagtg tggagtctga gactctatcc atgtctgcga tggaatcttt
661 tattgaaaaa cagacaaagt tactggaaat gcagccaaca aaagccccag aaaaagatcc
721 tgaacaacct cccaaaggac gtgtggacag ttgcgtgtca gatgcagccg tgccagccca
781 agaccccagc aacagcgatc caggaacaga gacagagtta gctgacacag ccctggatct
841 gctcctcttg ctactaacag aacagtggaa atggctatgt accgaaaaca tgcaaaagtt
901 tcttcgtctt atctttggga ccctagttca aaggtggcta gaggtgcagg tagctaattt
961 aacaagtcca cagcgctggg tgcagtacct ccggcttctt caggagtcca tctggcctgg
1021 tggagttttg cctaagtttc cacggcccgt aaggacccaa gagcagaaac tggctgctga
1081 gaaacaggct ttgcagagcc tgatgggagt cctcccagat ctcgtagtag aaattcttgg
1141 ggtgaacaaa tgccggctga gctggggtct agtcctggag tcactacaac aacccctcat
1201 caacaggcat ttgatttact gccttgggga catcatcctg gaattcttgg atctcagtgc
1261 ctctgttgag gagtctgctg ctaccacctc tgcctcagat accccaggca actctaagag
1321 gatgggtgtc tcctcttagc tggttattca cgccttcttc ccaggtcagg gaagtagagt
1381 tactcggcca ccagagacca gtcaggaagc ccgtgccctc ttcaagtagg ctacagctaa
1441 gaaggcctag gttctcggtg gctcacttct ctcccacttc tgctccgttt gtagcaggtg
1501 acaggggtct gtgtgtccca gttgcatgca cgtttatttc cctgttcctt ttgtgatgtt
1561 gggat
//