LOCUS AK316497 1780 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79396 complete cds, highly similar to
Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20).
ACCESSION AK316497
VERSION AK316497.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1780)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1780
/clone="TOVAR2001190"
/clone_lib="TOVAR2"
/db_xref="H-InvDB:HIT000500110"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="ovary, tumor tissue"
CDS 205..1677
/codon_start=1
/note="highly similar to Phenylalanyl-tRNA synthetase
beta chain (EC 6.1.1.20)"
/protein_id="BAH14868.1"
/transl_table=1
/translation="MPDGKIQKLIITEETAKIRPFAVAAVLRNIKFTKDRYDSFIELQ
EKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIY
KTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECTGTD
FTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLINKK
VGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN
NIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGSTEALTFALCSQEDIADKLGVDISA
TKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDIVIKDSNTDVGA
KNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEGPAFFPGRCA
EIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINIGPFL"
BASE COUNT 533 a 385 c 369 g 493 t
ORIGIN
1 gtgagttcga cacaccatgc cgactgtcag cgtgaagcgt gatctgctct tccaagccct
61 gggccgcacc tacactgacg aagaatttga tgaactatgt tttgaatttg gtctggagct
121 tgatgaaatt acatctgaga aggattggtt cgaggacttc aggtcttcaa agaaaggata
181 aaggctccag tgtataaacg ggtaatgcct gatggaaaaa tccagaaatt gattatcaca
241 gaagagacag ctaagatacg tccttttgcg gtagcagcag ttctccgtaa tataaagttt
301 actaaagatc gatatgacag cttcattgaa cttcaggaga aattacatca gaatatttgc
361 aggaaaagag cactggttgc cattggtacc catgatttgg acactttgtc gggcccattt
421 acttatactg caaagcgtcc ttcagatatc aaattcaagc ctctaaataa gaccaaggag
481 tatacagcct gtgaactgat gaacatatac aagactgaca atcacctgaa acattattta
541 catatcattg aaaacaaacc cctgtatcca gttatctatg atagcaatgg tgtcgtcctt
601 tcaatgcctc ccatcatcaa tggggatcat tccagaataa cagtaaatac tagaaatatt
661 tttattgaat gcacgggaac tgactttact aaggcaaaaa tagttcttga tattattgtc
721 accatgttca gtgaatattg tgagaatcaa tttacggtcg aagctgctga agtggttttt
781 cctaatggaa aatcacatac ctttccagaa ttagcttacc gaaaggagat ggtgagagct
841 gacctaatta acaaaaaagt tggaatcaga gaaactccag aaaatcttgc caaacttctg
901 accaggatgt atttaaaatc agaagtcata ggtgatggga atcagattga gattgaaatc
961 cctccaacca gagctgacat tatccatgca tgtgatattg tagaagatgc agctattgct
1021 tatggatata acaacattca gatgactctc ccgaaaactt acaccatagc taatcaattt
1081 cctcttaata agctcactga acttctccga catgacatgg cagccgctgg ctccactgaa
1141 gcacttacct ttgccctgtg ctcccaagaa gatattgctg ataaactagg tgtggatatc
1201 tctgcaacaa aggcagtcca cataagtaat cctaaaacag ctgaatttca ggtggcacgc
1261 actacccttc ttcctggcct cctgaagacc atagcagcaa atcgtaagat gccccttcca
1321 ctgaaactgt ttgaaatctc tgacattgta ataaaagatt ctaatacaga tgtaggtgca
1381 aaaaactaca gacatctctg tgctgtttat tacaacaaga atcctgggtt tgagatcatt
1441 catgggctgc tggacagaat tatgcagttg ctcgatgtgc ctcctggtga agacaagggg
1501 ggatatgtga tcaaagcatc agaagggcct gctttcttcc ccgggcgatg tgcagagatc
1561 tttgccaggg gtcaaagcgt cgggaagctt ggggtccttc atcctgacgt tatcaccaaa
1621 tttgagctga ccatgccctg ctcctcccta gaaatcaata ttggaccctt tttgtgaaga
1681 ctggtctctg tggtgtgatt ctcttcccag gtgtcccttt ctcctcccct agtgtcctta
1741 agtcctcctc cacagggaac atctatttgg gctttgatgt
//