LOCUS AK316435 3086 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79334 complete cds, highly similar to
Nuclear pore complex protein Nup214.
ACCESSION AK316435
VERSION AK316435.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3086)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3086
/clone="TESTI4042287"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000500048"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 307..3057
/codon_start=1
/note="highly similar to Nuclear pore complex protein
Nup214"
/protein_id="BAH14806.1"
/transl_table=1
/translation="MKSSLLLRGVHFCFHLPGTAKIETAVTSTPSASGQFSKPFSFSP
SGTGFNFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSG
ITSASNTTPGEPAASSSRPEAPSGTALSTTSSKLETPPSKLGELLFPSSLAGETLGSF
SGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPPVTSSA
TTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTV
PPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAGRSTEEATSSALPEKPGDS
EVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAE
ATPATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTSIV
APGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFSQLTNNTATAPSATPVFGQVAASTA
PSLFGQQTGSTASTAAATPQGSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAA
SVFSFSQPGFSSVPAFGQPASSTPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGLF
GQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNTGSVFGQAAS
TGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTA
TSSTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGGGSVASQGFGFSSPNKTGGFGA
APVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSS
NTTSFGTLASQNAPTFGSLSQQTSGFGTQSSGFSGFGSGTGGFSFGSNNSSVQGFGGW
RS"
BASE COUNT 689 a 894 c 755 g 748 t
ORIGIN
1 agtgatatgg aaccacagtt ggtatcatgt acgcctcaca tgagaaggag gtatctagca
61 cttctcgacc ggggcctaaa gctttatgtt aaaaggaaaa ttatatagta gaactgtcaa
121 agacttgagt attttacaaa aaggttttga gagatcatat actctttttt caaggacttc
181 attggagagg tttttgtcac tcttggagtt agaatcaaag aaacctaagg aactttgctt
241 tatgcatgtc tgggcaagta gtgtgacttg caagaaattt ccgagattca ccattcattg
301 ctaatcatga aatcctctct tttgttacga ggtgttcact tctgttttca cttgccaggg
361 acagccaaga tagaaacagc tgtgacttca accccatctg cttctgggca gttcagcaag
421 cctttctcat tttctccatc agggactggc tttaattttg ggataatcac accaacaccg
481 tcttctaatt tcactgctgc acaaggggca acaccctcca ctaaagagtc aagccagccg
541 gacgcattct catctggtgg gggaagcaaa ccttcttatg aggccattcc tgaaagctca
601 cctccctcag gaatcacatc cgcatcaaac accaccccag gagaacctgc cgcatctagc
661 agcagacctg aggcaccttc tggaactgct ctttccacca cctctagtaa gctggaaacc
721 ccaccgtcca agctgggaga gcttctgttt ccaagttctt tggctggaga gactctggga
781 agtttttcag gactgcgggt tggccaagca gatgattcta caaaaccaac caataaggct
841 tcatccacaa gcctaactag tacccagcca accaagacgt caggcgtgcc ctcagggttt
901 aattttactg cccccccggt gttagggaag cacacggagc cccctgtgac atcctctgca
961 accaccacct cagtagcacc accagcagcc accagcactt cctcaactgc cgtttttggc
1021 agtctgccag tcaccagtgc aggatcctct ggggtcatca gttttggtgg gacatctcta
1081 agtgctggca agactagttt ttcattcgga agccaacaga ccaatagcac agtgccccca
1141 tctgccccac caccaactac agctgccact ccccttccaa catcattccc cacattgtca
1201 tttggtagcc tcctgagttc agcaactacc ccctccctgc ctatgtccgc tggcagaagc
1261 acagaagagg ccacttcatc agctttgcct gagaagccag gtgacagtga ggtctcagca
1321 tcagcagcct cacttctaga ggagcaacag tcagcccagc ttccccaggc tcctccgcaa
1381 acttctgact ctgttaaaaa agaacctgtt cttgcccagc ctgcagtcag caactctggc
1441 actgcagcat ctagtactag tcttgtagca ctttctgcag aggctacccc agccaccacg
1501 ggggtccctg atgccaggac ggaggcagta ccacctgctt cctccttttc tgtgcctggg
1561 cagactgctg tcacagcagc tgctatctca agtgcaggcc ctgtggccgt cgaaacatca
1621 agtaccccca tagcctccag caccacgtcc attgttgctc ccggcccatc tgcagaggca
1681 gcagcatttg gtaccgtcac ttctggctca tccgtctttg ctcagcctcc tgctgccagt
1741 tctagctcag ctttcagcca gctcaccaac aacacagcca ctgccccctc tgccacgccc
1801 gtgtttgggc aagtggcagc cagcaccgca ccaagtctgt ttgggcagca gactggtagc
1861 acagccagca cagcagctgc cacaccacag ggcagcagct cagggtttag cagcccagct
1921 tttggtacca cagccccagg ggtctttgga cagacaacct tcgggcaggc ctcagtcttt
1981 gggcagtcgg cgagcagtgc tgcaagtgtc ttttccttca gtcagcctgg gttcagttcc
2041 gtgcctgcct tcggtcagcc tgcttcctcc actcccacat ccaccagtgg aagtgtcttt
2101 ggtgccgcct caagtaccag tagctccagt tccttctcat ttggacagtc ttctcccaac
2161 acaggagggg ggctgtttgg ccaaagcaac gctcctgctt ttgggcagag tcctggcttt
2221 ggacagggag gctctgtctt tggtggtacc tcagccgcca ccacaacagc agcaacctct
2281 gggttcagct tttgccaagc ttcaggtttt gggtctagta atactggttc tgtgtttggt
2341 caagcagcca gtactggtgg aatagtcttt ggccagcaat catcctcttc cagtggtagc
2401 gtgtttgggt ctggaaacac tggaagaggg ggaggtttct tcagtggcct tggaggaaaa
2461 cccagtcagg atgcagccaa caaaaaccca ttcagctcgg ccagtggggg ctttggatcc
2521 acagctacct caagtacctc taacctattt ggaaacagtg gggccaagac atttggtgga
2581 tttgccagct cgtcgtttgg agagcagaaa cccactggca ctttcagctc tggaggagga
2641 agtgtggcat cccaaggctt tgggttttcc tctccaaaca aaacaggtgg cttcggtgct
2701 gctccagtgt ttggcagccc tcctactttt gggggatccc ctgggtttgg aggggtgcca
2761 gcattcggtt cagccccagc ctttacaagc cctctgggct cgacgggagg caaagtgttc
2821 ggagagggca ctgcagctgc cagcgcagga ggattcgggt ttgggagcag cagcaacacc
2881 acatccttcg gcacgctcgc gagtcagaat gcccccactt tcggatcact gtcccaacag
2941 acttctggtt ttgggaccca gagtagcgga ttctctggtt ttggatcagg cacaggaggg
3001 ttcagctttg ggtcaaataa ctcgtctgtc cagggttttg gtggctggcg aagctgaggg
3061 cgtgtcagca ggcctttcga tccctg
//