LOCUS AK316422 2405 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79321 complete cds, highly similar to
Tripartite motif-containing protein 36.
ACCESSION AK316422
VERSION AK316422.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2405)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2405
/clone="TESTI4022882"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000500035"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 233..2383
/codon_start=1
/note="highly similar to Tripartite motif-containing
protein 36"
/protein_id="BAH14793.1"
/transl_table=1
/translation="MEGDGSDSPVTIKNIERELICPACKELFTHPLILPCQHSICHKC
VKELLLTLDDSFNDVGSDNSNQSSPRLRLPSPSMDKIDRINRPGWKRNSLTPRTTVFP
CPGCEHDVDLGERGINGLFRNFTLETIVERYRQAARAATAIMCDLCKPPPQESTKSCM
DCSASYCNECFKIHHPWGTIKAQHEYVGPTTNFRPKILMCPEHETERINMYCELCRRP
VCHLCKLGGNHANHRVTTMSSAYKTLKEKLSKDIDYLIGKESQVKSQISELNLLMKET
ECNGERAKEEAITHFEKLFEVLEERKSSVLKAIDSSKKLRLDKFQTQMEEYQGLLENN
GLVGYAQEVLKETDQSCFVQTAKQLHLRIQKATESLKSFRPAAQTSFEDYVVNTSKQT
ELLGELSFFSSGIDVPEINEEQSKVYNNALINWHHPEKDKADSYVLEYRKINRDDEMS
WNEIEVCGTSKIIQDLENSSTYAFRVRAYKGSICSPCSRELILHTPPAPVFSFLFDEK
CGYNNEHLLLNLKRDRVESRAGFNLLLAAERIQVGYYTSLDYIIGDTGITKGKHFWAF
RVEPYSYLVKVGVASSDKLQEWLRSPRDAVSPRYEQDSGHDSGSEDACFDSSQPFTLV
TIGMQKFFIPKSPTSSNEPENRVLPMPTSIGIFLDCDKGKVNFYDMDQMKCLYERQVD
CSHTLYPAFALMGSGGIQLEEPITAKYLEYQEDM"
BASE COUNT 736 a 516 c 539 g 614 t
ORIGIN
1 attcccgggg tagtcgctgg gagcaaagct cgcttctccc gcgcctgtgc ttttgcctgc
61 cccggcttac ttctccccgc gtcggtccgc tggccacgta cagctgacca gctcatcttc
121 cagcttcgga ccgaggctcc acggccgccg cagggacccg cccaccagac cctgcgctcg
181 gtagccggtg tgagtggaac gtgccgctga tgacacctgg cagaaggcag ccatggaggg
241 cgatggctca gattcgccgg ttaccattaa gaatatcgaa agggagctca tttgcccagc
301 atgcaaggag ctgtttaccc acccattgat tctcccttgc caacatagta tctgtcataa
361 atgtgtaaaa gaactcctgc tgactctcga tgattcattc aacgatgtgg gatcagacaa
421 ctccaatcaa agcagtcctc gacttcggct cccctcccct agtatggata aaattgaccg
481 aattaacaga ccaggctgga agcgcaattc attgaccccg aggacaactg ttttcccttg
541 ccctggctgt gagcatgatg tggatcttgg agaacgagga atcaatggtc tgtttcgaaa
601 cttcactttg gaaactattg tggaaagata tcgtcaagca gctagggcag ccacagccat
661 tatgtgtgac ctttgtaaac caccacctca agaatccaca aaaagctgca tggactgtag
721 tgcaagttac tgcaatgaat gcttcaaaat tcatcaccct tggggtacta taaaagctca
781 acatgagtat gttggtccaa ctactaactt cagacccaag attttaatgt gcccagaaca
841 tgaaacagag agaataaaca tgtactgtga attatgtagg aggccagttt gccatctgtg
901 taagttgggt ggtaatcatg ccaaccaccg tgtaaccact atgagcagtg cctacaaaac
961 cttaaaggaa aagctttcaa aggatattga ttaccttatt ggtaaggaaa gccaggtgaa
1021 gagtcaaata tctgaactaa acttgttaat gaaagaaaca gagtgtaatg gagagagggc
1081 taaagaagaa gcaattacac attttgaaaa gctctttgaa gttctggaag agaggaaatc
1141 atctgttttg aaagcaattg actcctctaa gaaactaaga ttagacaaat ttcagactca
1201 aatggaagag taccagggac ttctagagaa caatggactt gtgggatatg ctcaagaagt
1261 gctaaaggag acagatcagt cttgctttgt gcagacagca aagcagctcc acctcagaat
1321 acagaaagcc acagaatctt tgaagagctt tagacctgca gctcagactt cttttgaaga
1381 ctatgttgtt aatacctcta aacaaacaga acttcttgga gaattatcct ttttctctag
1441 tggcatagac gtgccagaga tcaatgagga acagagcaaa gtttataaca atgccttgat
1501 aaattggcac catccagaaa aggataaagc tgatagctat gttcttgaat atcggaaaat
1561 caatagagat gatgaaatgt catggaatga gatagaagtg tgtggaacaa gtaaaataat
1621 tcaagacttg gaaaacagta gtacctatgc tttcagagta agagcttaca agggttcaat
1681 ctgtagtcct tgcagcagag aattgattct tcatactcct ccagctccag ttttcagctt
1741 cctctttgat gaaaaatgtg gctataataa tgaacacctc ctgctgaact tgaagagaga
1801 ccgtgtagag agtagagctg gatttaatct tctgcttgct gcagaacgca tccaagtggg
1861 ttattacaca agcttagact acatcattgg agatactggc attacaaaag gaaaacactt
1921 ctgggccttc cgtgtggaac catattcata cctggtaaaa gtgggagttg cttctagcga
1981 taaactacaa gaatggctcc gttctccccg ggatgcagtt agtccaagat atgagcaaga
2041 cagtgggcat gacagtggaa gtgaggatgc ctgttttgat tcttcacaac catttacctt
2101 agttactata ggcatgcaga aattttttat acccaagtca cctacttctt ctaatgaacc
2161 tgaaaataga gttctcccta tgccaacaag tattgggatt ttccttgact gtgataaagg
2221 caaagtaaat ttctatgata tggatcagat gaaatgcctt tatgaacgcc aagtggactg
2281 ttcacataca ctgtatccag catttgcatt aatgggcagt ggaggaattc agcttgaaga
2341 acccatcaca gcaaaatatc tggaatacca agaggacatg tagttgaaac atctgatgtg
2401 actca
//