LOCUS AK316414 1506 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79313 complete cds, highly similar to
Sorting nexin-19.
ACCESSION AK316414
VERSION AK316414.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1506)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1506
/clone="TESTI4006703"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000500027"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 359..1477
/codon_start=1
/note="highly similar to Sorting nexin-19"
/protein_id="BAH14785.1"
/transl_table=1
/translation="MDSDRVEARKSLLESFLKQLCAIPEIANSEEVQEFLALNTDARI
AFVKKPFMVSRIDKMVVSAIVDTLKTAFPRSEPQSPTEELSEAETESKPQTEGKKASK
SRLRFSSSKISPALSVTEAQDKILYCLQEGNVESETLSMSAMESFIEKQTKLLEMQPT
KAPEKDPEQPPKGRVDSCVSDAAVPAQDPSNSDPGTETELADTALDLLLLLLTEQWKW
LCTENMQKFLRLIFGTLVQRWLEVQVANLTSPQRWVQYLRLLQESIWPGGVLPKFPRP
VRTQEQKLAAEKQALQSLMGVLPDLVVEILGVNKCRLSWGLVLESLQQPLINRHLIYC
LGDIILEFLDLSASVEESAATTSASDTPGNSKRMGVSS"
BASE COUNT 386 a 391 c 400 g 329 t
ORIGIN
1 agccttcaca caggcccggc tgcggagcgc agtcgcccag gtttacggcg gcagagggcc
61 gaggctcccg gagaggaccg cgatgagtcc acttcaggtc ggggctgagt gtgggcgcgc
121 ggttcccggc ggcgtgtgac ccagtcttcg ccggccgcag cccgctgcgt gttacgagac
181 agcccttgac ggtgaaaaca gcagcggcct gcagcagctg gcctaccaca ctgtgaatcg
241 tcgctatcgg gagttcttga atctgcagac ccgtctggag gagaaaccag atctacgaaa
301 gttcatcaaa aatgtgaagg gtcctaaaaa gctctttcca gatcttccat ttggaaacat
361 ggacagtgac agagtagaag cccgtaagag cctcctagaa tcattcctaa agcaactctg
421 tgccattccg gagatcgcta acagtgagga ggtgcaggag ttccttgctc tgaacacaga
481 tgctcgtatt gcctttgtca agaaaccatt tatggtctct agaatagaca agatggtggt
541 gagtgccatt gtggacacct tgaagacagc gtttcctcgc tctgaacccc agagccccac
601 agaggagctg agtgaggccg agaccgaaag caagccccag acagaaggca agaaggctag
661 caagtctagg ctgaggttct catccagtaa aatttctcca gcactaagtg tgactgaagc
721 acaagacaag attctttatt gtctccagga aggcaatgtg gagtctgaga ctctatccat
781 gtctgcgatg gaatctttta ttgaaaaaca gacaaagtta ctggaaatgc agccaacaaa
841 agccccagaa aaagatcctg aacaacctcc caaaggacgt gtggacagtt gcgtgtcaga
901 tgcagccgtg ccagcccaag accccagcaa cagcgatcca ggaacagaga cagagttagc
961 tgacacagcc ctggatctgc tcctcttgct actaacagaa cagtggaaat ggctatgtac
1021 cgaaaacatg caaaagtttc ttcgtcttat ctttgggacc ctagttcaaa ggtggctaga
1081 ggtgcaggta gctaatttaa caagtccaca gcgctgggtg cagtacctcc ggcttcttca
1141 ggagtccatc tggcctggtg gagttttgcc taagtttcca cggcccgtaa ggacccaaga
1201 gcagaaactg gctgctgaga aacaggcttt gcagagcctg atgggagtcc tcccagatct
1261 cgtagtagaa attcttgggg tgaacaaatg ccggctgagc tggggtctag tcctggagtc
1321 actacaacaa cccctcatca acaggcattt gatttactgc cttggggaca tcatcctgga
1381 attcttggat ctcagtgcct ctgttgagga gtctgctgct accacctctg cctcagatac
1441 cccaggcaac tctaagagga tgggtgtctc ctcttagctg gttattcacg ccttcttccc
1501 aggtca
//