LOCUS AK316373 1844 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79272 complete cds, highly similar to
Sorting nexin-17.
ACCESSION AK316373
VERSION AK316373.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1844)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1844
/clone="TESTI2005221"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000499986"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 670..1440
/codon_start=1
/note="highly similar to Sorting nexin-17"
/protein_id="BAH14744.1"
/transl_table=1
/translation="MENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKE
FLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVT
RMRCWRVTSSVPLPSGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSI
CLQSMVDELMVKKSGGSIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATRESMVKL
SSKLSAVSLRGIGSPSTDASASDVHGNFAFEGIGDGDL"
BASE COUNT 399 a 475 c 531 g 439 t
ORIGIN
1 acttttgtgt cctcaggcct ataacattca cgtgaatgga gtcctgcact gtcgggtgcg
61 ctacagccag ctcctggggc tgcacgagca gcttcggaag gagtatgggg ccaatgtgct
121 tcctgcattc cccccaaaga agcttttctc tctgactcct gctgaggtag aacagaggag
181 agagcagtta gagaagtaca tgcaagctgt tctatagact ggactcacct agatggcagc
241 caagggtggg gcaggtgaag aatttatgca agcagtgagt gagttcggca agacccattg
301 cttgggagca gcgagacttt caacagtttc ctgcgtcggg cacaacagga gacacagcag
361 gtccccacag aggaagtgtc cttggaagtg ctgctcagca acgggcagaa agttctggtc
421 aacgtgctaa cttcagatca gactgaggat gtcctggagg ctgtagctgc aaagctggat
481 cttccagatg acttgattgg atactttagt ctattcttag ttcgagaaaa agaggatgga
541 gccttttctt ttgtacggaa gttgcaagag tttgagctgc cttatgtgtc tgtcaccagc
601 cttcggagtc aagagtataa gattgtgcta aggaagagtt attgggactc tgcctatgat
661 gacgatgtca tggagaaccg ggttggcctg aacctgcttt atgctcagac ggtatcagat
721 attgagcgtg ggtggatctt ggtcaccaag gaacagcacc ggcaactcaa atctctgcaa
781 gagaaagtct ccaagaagga gttcctgaga ctggcccaga cgctgcggca ctatggctac
841 ttgcgctttg atgcctgtgt ggctgacttc ccagaaaagg actgtcctgt ggtggtgagc
901 gcgggcaaca gtgagctcag cctgcagctc cgcctgcctg gccagcaact ccgagaaggc
961 tccttccggg tcacccgcat gcgatgctgg cgggtcacct cctctgtacc attgcccagt
1021 ggaagcacga gcagcccagg ccggggccgg ggtgaggtgc gcctggaact ggcttttgaa
1081 tacctcatga gcaaggaccg gctacagtgg gtcaccatca ctagccccca ggctatcatg
1141 atgagcatct gcttgcagtc catggttgat gaactgatgg tgaagaaatc tggcggcagt
1201 atcaggaaga tgctgcgccg gcgggtgggg ggtactctga gacgctcaga cagccagcaa
1261 gcagtgaagt ccccaccact gcttgagtca cctgatgcca cccgggagtc tatggtcaaa
1321 ctctcaagta agctgagtgc cgtgagcttg cggggaattg gcagtcccag cacagatgcc
1381 agtgccagtg atgtccacgg caatttcgcc ttcgagggca ttggagatgg ggatctgtaa
1441 tctccactgc ttggatgtct gccctctacc ccagaggaat ttacagaaac ttgccctgtg
1501 cctgtgtccc ccatgctagg ggcggagggg tcttttcctt cttctttcct acctacccct
1561 tttctcttgg ccaggggcct cgtatcctac ctttccttgt cccctgggct ggctgcacag
1621 aggattgccc cttctctttt cagagctggc cctcgatgcc aaattagcat ttagtatttt
1681 gcacaaagtc taagggacca tggctgcctg ccttggggag gaaccatatc tccctctggg
1741 ccgcttctgg cctcttggag ccatgggcca aaggccaagg ggatgggcag aggtctgtgt
1801 ttggtctggc ccagttcccc atcattaaac tcagcctgac tgct
//