LOCUS AK316323 1868 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79222 complete cds, highly similar to
Voltage-dependent L-type calcium channel subunit beta-3.
ACCESSION AK316323
VERSION AK316323.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1868)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1868
/clone="SMINT2005850"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000499936"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 97..1548
/codon_start=1
/note="highly similar to Voltage-dependent L-type calcium
channel subunit beta-3"
/protein_id="BAH14694.1"
/transl_table=1
/translation="MSFSDSSATFLLNEGSADSYTSRPSLDSDVSLEEDRESARREVE
SQAQQQLERAKHKPVAFAVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSDDW
WIGRLVKEGGDIAFIPSPQRLESIRLKQEQKARRSGNPSSLSDIGNRRSPPPSLAKQK
QKQAEHVPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITRVTA
DLSLAKRSVLNNPGKRTIIERSSARSSIAEVQSEIERIFELAKSLQLVVLDADTINHP
AQLAKTSLAPIIVFVKVSSPKVLQRLIRSRGKSQMKHLTVQMMAYDKLVQCPPESFDV
ILDENQLEDACEHLAEYLEVYWRATHHPAPGPGLLGPPSAIPGLQNQQLLGERGEEHS
PLERDSLMPSDEASESSRQAWTGSSQRSSRHLEEDYADAYQDLYQPHRQHTSGLPSAN
GHDPQDRLLAQDSEHNHSDRNWQRNRPWPKDSY"
BASE COUNT 398 a 599 c 535 g 336 t
ORIGIN
1 gtgcaggcgg gagcagcgtg cagagcagcg gccgggtttt gctcccgcct cggagcccct
61 ggcccggggg agggggagag gccgctagcc tggtctatgt ctttttctga ctccagtgca
121 accttcctgc tgaacgaggg ttcagccgac tcctacacca gccgcccatc tctggactca
181 gacgtctccc tggaggagga ccgggagagt gcccggcgtg aagtagagag ccaggctcag
241 cagcagctcg aaagggccaa gcacaaacct gtggcatttg cggtgaggac caatgtcagc
301 tactgtggcg tactggatga ggagtgccca gtccagggct ctggagtcaa ctttgaggcc
361 aaagattttc tgcacattaa agagaagtac agcgatgact ggtggatcgg gcggctagtg
421 aaagagggcg gggacatcgc cttcatcccc agcccccagc gcctggagag catccggctc
481 aaacaggagc agaaggccag gagatctggg aacccttcca gcctgagtga cattggcaac
541 cgacgctccc ctccgccatc tctagccaag cagaagcaaa agcaggcgga acatgttccc
601 ccatatgacg tggtgccctc catgcggcct gtggtgctgg tgggaccctc tctgaaaggt
661 tatgaggtca cagacatgat gcagaaggct ctcttcgact tcctcaaaca cagatttgat
721 ggcaggatct ccatcacccg agtcacagcc gacctctccc tggcaaagcg atctgtgctc
781 aacaatccgg gcaagaggac catcattgag cgctcctctg cccgctccag cattgcggaa
841 gtgcagagtg agatcgagcg catatttgag ctggccaaat ccctgcagct agtagtgttg
901 gacgctgaca ccatcaacca cccagcacag ctggccaaga cctcgctggc ccccatcatc
961 gtctttgtca aagtgtcctc accaaaggta ctccagcgtc tcattcgctc ccgggggaag
1021 tcacagatga agcacctgac cgtacagatg atggcatatg ataagctggt tcagtgccca
1081 ccggagtcat ttgatgtgat tctggatgag aaccagctgg aggatgcctg tgagcacctg
1141 gctgagtacc tggaggttta ctggcgggcc acgcaccacc cagcccctgg ccccggactt
1201 ctgggtcctc ccagtgccat ccccggactt cagaaccagc agctgctggg ggagcgtggc
1261 gaggagcact ccccccttga gcgggacagc ttgatgccct ctgatgaggc cagcgagagc
1321 tcccgccaag cctggacagg atcttcacag cgtagctccc gccacctgga ggaggactat
1381 gcagatgcct accaggacct gtaccagcct caccgccaac acacctcggg gctgcctagt
1441 gctaacgggc atgaccccca agaccggctt ctagcccagg actcagaaca caaccacagt
1501 gaccggaact ggcagcgcaa ccggccttgg cccaaggata gctactgaca gcctcctgct
1561 gccctaccct ggcaggcaca ggcgcagctg gctggggggc ccactccagg cagggtggcg
1621 ttagactggc atcaggctgg cactaggctc agcccccaaa accccctgcc cagccccagc
1681 ttcagggctg cctgtggtcc caaggttctg ggagaaacag gggaccccct cacctcctgg
1741 gcagtgaccc ctactaggct cccattccag gtactagctg tgtgttctgc acccctggca
1801 ccttcctctc ctcccacaca ggaagctgcc ccactgggca gtgccctcag gccaggatcc
1861 ccttagca
//