LOCUS AK316274 2002 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79173 complete cds, highly similar to ETS
translocation variant 3.
ACCESSION AK316274
VERSION AK316274.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2002)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2002
/clone="OCBBF3004165"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000499887"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 290..1828
/codon_start=1
/note="highly similar to ETS translocation variant 3"
/protein_id="BAH14645.1"
/transl_table=1
/translation="MKAGCSIVEKPEGGGGYQFPDWAYKTESSPGSRQIQLWHFILEL
LQKEEFRHVIAWQQGEYGEFVIKDPDEVARLWGRRKCKPQMNYDKLSRALRYYYNKRI
LHKTKGKRFTYKFNFNKLVMPNYPFINIRSSGVVPQSAPPVPTASSRFHFPPLDTHSP
TNDVQPGRFSASSLTASGQESSNGTDRKTELSELEDGSAADWRRGVDPVSSRNAIGGG
GIGHQKRKPDIMLPLFARPGMYPDPHSPFAVSPIPGRGGVLNVPISPALSLTPTIFSY
SPSPGLSPFTSSSCFSFNPEEMKHYLHSQACSVFNYHLSPRTFPRYPGLMVPPLQCQM
HPEESTQFSIKLQPPPVGRKNRERVESSEESAPVTTPTMASIPPRIKVEPASEKDPES
LRQSAREKEEHTQEEGTVPSRTIEEEKGTIFARPAAPPIWPSVPISTPSGEPLEVTED
SEDRPGKEPSAPEKKEDALMPPKLRLKRRWNDDPEARELSKSGKFLWNGSGPQGLATA
AADA"
BASE COUNT 486 a 527 c 582 g 407 t
ORIGIN
1 ggatgcgcgg gatgcgggcc gggaggagcg cgcaggggga ggagtgcggg cggaagtcgg
61 cgtctgctga aaggagaaag gaaagggaga cgctgctggg tgcggcgagg tgaggctggg
121 aaccggcggg agggcgcctc ctcctccccc gccctctctg ctgaggatgg aagtgacgaa
181 agcagccgag gaggtcactt cctgctgggg tggatgagga ggagccggag acgccgcgga
241 ggagaccgga ccgaagacgg accgtgccgg gaagagcagg cgggtgaaaa tgaaagccgg
301 ctgtagcatc gtggaaaagc cagaaggagg tggagggtat cagtttcctg actgggccta
361 caaaacagag tcatccccag gctcccggca gatccagctg tggcacttca tcctggagct
421 gctgcagaag gaagagttcc gccatgtcat cgcctggcag cagggagagt acggggaatt
481 tgtcatcaag gatccagatg aggtggcccg cctctggggc cgcaggaaat gcaaaccaca
541 gatgaattat gacaagctga gccgggccct cagatactat tacaacaaga ggatccttca
601 taaaacaaaa gggaaaagat ttacctataa atttaacttc aacaagctgg tgatgcccaa
661 ctacccattc atcaacattc ggtcaagtgg tgtggttcct cagagtgcac caccagtgcc
721 aacagcctct tcccggttcc atttcccacc tctggacacc cattctccaa ccaatgatgt
781 gcagccggga cggttctctg ctagctccct aactgcttct ggccaggagt ccagtaatgg
841 tactgataga aagactgagc tttcagagct ggaggatggc tcagctgctg actggcgccg
901 gggtgtggat cccgtgtcct ccaggaatgc cattggtgga ggagggattg gccatcagaa
961 acgcaagcct gacataatgc ttcctctgtt tgctaggcca gggatgtacc ctgaccccca
1021 cagtcccttc gctgtctctc caatccctgg ccgcggaggt gtccttaatg tccccatttc
1081 accagccctc tccctgactc ccaccatctt ctcctatagc ccatcaccag gcctgagccc
1141 tttcaccagc agcagctgct tctccttcaa ccctgaggaa atgaaacact accttcattc
1201 tcaagcttgt tctgtgttca actaccatct gagtcctcgg acttttcccc gttacccagg
1261 gctcatggtt ccaccactgc agtgccaaat gcatcctgag gagtcaactc agttctccat
1321 caagctgcag cccccaccag ttgggcggaa gaaccgggag agggttgaga gcagcgagga
1381 gtcagcacca gtcaccacgc ccaccatggc ttctattccc ccaagaatca aggtggaacc
1441 tgcctctgaa aaggatcctg agagcctcag gcagtcggca cgagagaagg aggagcacac
1501 tcaagaagag ggcactgtgc caagcaggac cattgaagag gaaaaaggca ccatctttgc
1561 ccgtcctgct gcaccaccca tctggccctc tgtgcccatt agcaccccaa gtggagaacc
1621 tctggaggtg actgaagaca gtgaggatag gcctggcaaa gagcccagtg cacctgagaa
1681 gaaagaagat gcactgatgc cccccaagct tcggttgaag cggcgctgga atgatgaccc
1741 tgaagcccga gagctgagca agagtggcaa gtttctctgg aatgggtcag gaccccaggg
1801 cttggcaaca gcagctgctg atgcttagaa ctggaagtgg attaggagct gtttatacta
1861 taatcaaata catacatgta tttatgtagc aagatttcag ggtggggggg agggagttaa
1921 actggtttga tcattctagg ggcatagact tgtattttta tgttttgggg atgggatggg
1981 gttatcttct gttgtaaatt ag
//