LOCUS       AK316263                3123 bp    mRNA    linear   HUM 21-JAN-2009
DEFINITION  Homo sapiens cDNA, FLJ79162 partial cds, highly similar to
            Protocadherin-11 X-linked precursor.
ACCESSION   AK316263
VERSION     AK316263.1
KEYWORDS    FLI_CDNA; oligo capping.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3123)
  AUTHORS   Isogai,T. and Yamamoto,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
            Contact:Takao Isogai
            Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
            Chiyoda-ku, Tokyo 101-0044, Japan
            E-mail :flj-cdna@nifty.com
REFERENCE   2
  AUTHORS   Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
            Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
            Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
            Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
  TITLE     NEDO human cDNA sequencing project
  JOURNAL   Unpublished (2008)
COMMENT     Human cDNA sequencing project focused on splicing variants of mRNA
            in NEDO functional analysis of protein and research application
            project supported by Ministry of Economy, Trade and Industry,
            Japan; cDNA selection for complete cds sequencing: Reverse
            Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
            (Hitachi) and Japan Biological Informatics Consortium, Japan
            (JBIC); cDNA complete cds sequencing: JBIC; cDNA library
            construction: Helix Research Institute supported by Japan Key
            Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
            Research Association for Biotechnology, Japan, Biotechnology
            Center, National Institute of Technology and Evaluation, Japan and
            HRI; cDNA mapping to human genome: Central Research Laboratory,
            Hitachi; evaluation and annotation: REPRORI.
FEATURES             Location/Qualifiers
     source          1..3123
                     /clone="OCBBF2009023"
                     /clone_lib="OCBBF2"
                     /db_xref="H-InvDB:HIT000499876"
                     /db_xref="taxon:9606"
                     /dev_stage="fetal"
                     /mol_type="mRNA"
                     /note="cloning vector: pME18SFL3"
                     /organism="Homo sapiens"
                     /tissue_type="brain"
     CDS             433..>3123
                     /codon_start=1
                     /note="highly similar to Protocadherin-11 X-linked
                     precursor"
                     /protein_id="BAH14634.1"
                     /transl_table=1
                     /translation="MRTERQWVLIQIFQVLCGLIQQTVTSVPGMDLLSGTYIFAVLLA
                     CVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVP
                     LIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIED
                     INDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDV
                     IETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHP
                     VFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNAT
                     TGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNP
                     VNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFLLETA
                     AYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENN
                     SPGIQLTKVSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYL
                     FTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVT
                     DPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSR
                     SSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEV
                     RYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIVN
                     LFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVV
                     IFITAVVRCRQAPHLKAAQKNKQNSEWATPNPENRQMIMMK"
BASE COUNT          942 a          679 c          702 g          800 t
ORIGIN      
        1 gcagtcggcg aactgtcggg gcgggaggag ccgtgagcag tagctgcact cagctgcccg
       61 cgcggcaaag aggaaggcaa gccaaacaga gtgcgcagag tggcagtgcc agcggcgaca
      121 caggcagcac aggcagcccg ggctgcctga atagcctcag aaacaacctc agcgactccg
      181 gctgctctgc ggactgcgag ctgtggcggt agagcccgct acagcagtcg cagtctccgt
      241 ggagcgggcg gaagcctttt ttctcccttt cgtttacctc ttcattctac tctaaaggca
      301 tcgttattag gaaaatcctg ttgcgaataa gaaggattcc acagatcaca taccggagag
      361 gttttgcctc agctgctctc aactttgtaa tcttgtgaag aagctgacaa gcttggctga
      421 ttgcagagca ctatgaggac tgaacgacag tgggttttaa ttcagatatt tcaagtgttg
      481 tgcgggttaa tacaacaaac tgtaacaagt gtacctggta tggacttgtt gtccgggacg
      541 tacattttcg cggtcctgct agcatgcgtg gtgttccact ctggcgccca ggagaaaaac
      601 tacaccatcc gagaagaaat gccagaaaac gtcctgatag gcgacttgtt gaaagacctt
      661 aacttgtcgc tgattccaaa caagtccttg acaactgcta tgcagttcaa gctagtgtac
      721 aagaccggag atgtgccact gattcgaatt gaagaggata ctggtgagat cttcactact
      781 ggcgctcgca ttgatcgtga gaaattatgt gctggtatcc caagggatga gcattgcttt
      841 tatgaagtgg aggttgccat tttgccggat gaaatattta gactggttaa gatacgtttt
      901 ctgatagaag atataaatga taatgcacca ttgttcccag caacagttat caacatatca
      961 attccagaga actcggctat aaactctaaa tatactctcc cagcggctgt tgatcctgac
     1021 gtaggaataa acggagttca aaactacgaa ctaattaaga gtcaaaacat ttttggcctc
     1081 gatgtcattg aaacaccaga aggagacaag atgccacaac tgattgttca aaaggagtta
     1141 gatagggaag agaaggatac ctacgtgatg aaagtaaagg ttgaagatgg tggctttcct
     1201 caaagatcca gtactgctat tttgcaagtg agtgttactg atacaaatga caaccaccca
     1261 gtctttaagg agacagagat tgaagtcagt ataccagaaa atgctcctgt aggcacttca
     1321 gtgacacagc tccatgccac agatgctgac ataggtgaaa atgccaagat ccacttctct
     1381 ttcagcaatc tagtctccaa cattgccagg agattatttc acctcaatgc caccactgga
     1441 cttatcacaa tcaaagaacc actggatagg gaagaaacac caaaccacaa gttactggtt
     1501 ttggcaagtg atggtggatt gatgccagca agagcaatgg tgctggtaaa tgttacagat
     1561 gtcaatgata atgtcccatc cattgacata agatacatcg tcaatcctgt caatgacaca
     1621 gttgttcttt cagaaaatat tccactcaac accaaaattg ctctcataac tgtgacggat
     1681 aaggatgcgg accataatgg cagggtgaca tgcttcacag atcatgaaat ccctttcaga
     1741 ttaaggccag tattcagtaa tcagttcctc ctggagactg cagcatatct tgactatgag
     1801 tccacaaaag aatatgccat taaattactg gctgcagatg ctggcaaacc tcctttgaat
     1861 cagtcagcaa tgctcttcat caaagtgaaa gatgaaaatg acaatgctcc agttttcacc
     1921 cagtctttcg taactgtttc tattcctgag aataactctc ctggcatcca gttgacgaaa
     1981 gtaagtgcaa tggatgcaga cagtgggcct aatgctaaga tcaattacct gctaggccct
     2041 gatgctccac ctgaattcag cctggattgt cgtacaggca tgctgactgt agtgaagaaa
     2101 ctagatagag aaaaagagga taaatattta ttcacaattc tggcaaaaga taacggggta
     2161 ccacccttaa ccagcaatgt cacagtcttt gtaagcatta ttgatcagaa tgacaatagc
     2221 ccagttttca ctcacaatga atacaacttc tatgtcccag aaaaccttcc aaggcatggt
     2281 acagtaggac taatcactgt aactgatcct gattatggag acaattctgc agttacgctc
     2341 tccattttag atgagaatga tgacttcacc attgattcac aaactggtgt catccgacca
     2401 aatatttcat ttgatagaga aaaacaagaa tcttacactt tctatgtaaa ggctgaggat
     2461 ggtggtagag tatcacgttc ttcaagtgcc aaagtaacca taaatgtggt tgatgtcaat
     2521 gacaacaaac cagttttcat tgtccctcct tccaactgtt cttatgaatt ggttctaccg
     2581 tccactaatc caggcacagt ggtctttcag gtaattgctg ttgacaatga cactggcatg
     2641 aatgcagagg ttcgttacag cattgtagga ggaaacacaa gagatctgtt tgcaatcgac
     2701 caagaaacag gcaacataac attgatggag aaatgtgatg ttacagacct tggtttacac
     2761 agagtgttgg tcaaagctaa tgacttagga cagcctgatt ctctcttcag tgttgtaatt
     2821 gtcaatctgt tcgtgaatga gtcggtgacc aatgctacac tgattaatga actggtgcgc
     2881 aaaagcactg aagcaccagt gaccccaaat actgagatag ctgatgtatc ctcaccaact
     2941 agtgactatg tcaagatcct ggttgcagct gttgctggca ccataactgt cgttgtagtt
     3001 attttcatca ctgctgtagt aagatgtcgc caggcaccac accttaaggc tgctcagaaa
     3061 aacaagcaga attctgaatg ggctacccca aacccagaaa acaggcagat gataatgatg
     3121 aag
//