LOCUS AK316233 1965 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79132 complete cds, highly similar to Zinc
finger protein 79.
ACCESSION AK316233
VERSION AK316233.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1965)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1965
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2021949"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000499846"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 532..1956
/codon_start=1
/note="highly similar to Zinc finger protein 79"
/protein_id="BAH14604.1"
/transl_table=1
/translation="MAAGLLTAGPRGSTFFSSVTVAFAQERWRCLVSTPRDRFKEGIP
GKSRSLVLLGLPVSQPGMNSQLEQREGAWMLEGEDLRSPSPGWKIISGSPPEQALSEA
SFQDPCVEMPPGDSDHGTSDLEKSFNLRPVLSPQQRVPVEARPRKCETHTESFKNSEI
LKPHRAKPYACNECGKAFSYCSSLSQHQKSHTGEKPYECSECGKAFSQSSSLIQHQRI
HTGEKPYKCSECGRAFSQNANLTKHQRTHTGEKPYRCSECEKAFSDCSALVQHQRIHT
GEKPYECSDWGKAFRHSANLTNHQRTHTGEKPYKCSECGKAFSYCAAFIQHQRIHTGE
KPYRCAACGKAFSQSANLTNHQRTHTGEKPYKCSECGKAFSQSTNLIIHQKTHTGEKP
YKCNECGKFFSESSALIRHHIIHTGEKPYECNECGKAFNQSSSLSQHQRIHTGVKPYE
CSECGKAFRCSSAFVRHQRLHAGE"
BASE COUNT 522 a 518 c 557 g 368 t
ORIGIN
1 acagcggttc ttgagctctc gcggttgccg gtagattgtt gccagttgcc agttgccagt
61 cgtttttcgg aaagctggca gcggcttttt caccgggttc tgcttgaggc cgagccaaag
121 agtggctgtg actcgggaga cggagtggaa cacccggctg ggcaggcccg gacagctccc
181 gcgacccagc accgcaggat cagaccgtgc ctctgcgggg agaggctgga gaggaagagt
241 ccggcctggg agccgtcaga gcagccctgc agaacggggt gggggctgct gtagatagac
301 ccttacgccc agagaactgc tgggaggctg tggcgcgagg cgggactcaa atgctggagg
361 aaggagatga gaaaaatgag acttagagag gttacgtgat ttgcacactg ctgctgagtg
421 gtggatcatg gatacttgag agtctgtgaa cactctaatg cctccctaca tctgatactg
481 ccttccccag gccctgccct tccccaagag gaaaacacag gagaggaagg aatggctgct
541 ggtctcctca cagctgggcc ccggggatcc acattcttca gcagtgtgac ggtagctttt
601 gcacaggaaa ggtggaggtg cctcgtgtct actccacggg acaggttcaa ggaggggata
661 ccaggaaagt ccaggagcct tgtcctacta ggacttccag tttcccagcc tggcatgaac
721 tcccagttgg aacaaaggga aggcgcatgg atgctggagg gcgaagacct gcgaagtccc
781 tctccaggct ggaagattat atctggatca ccaccagagc aagccctttc tgaagcttca
841 ttccaagacc catgtgtaga gatgccccct ggggattcag accacgggac cagtgacctt
901 gagaagagct tcaatctgag accagtcctc tctccgcaac agagagtgcc cgtggaagcg
961 agacctcgca aatgtgagac acacaccgag agcttcaaga actcggaaat cctgaaacct
1021 cacagagcaa aaccatatgc atgtaatgaa tgtggcaaag ccttcagtta ctgttcttcc
1081 ctttctcagc atcagaagag ccacactgga gagaagccct atgagtgcag tgaatgtggg
1141 aaggccttca gccagagctc atctctcatt cagcaccaga ggattcacac tggagagaag
1201 ccttacaagt gcagtgaatg tggaagagcc ttcagccaga acgccaacct caccaaacac
1261 cagcgaaccc acaccggaga gaagccctac agatgcagcg agtgtgagaa agccttcagt
1321 gactgctcag ctcttgttca gcatcagaga attcataccg gagagaagcc ctacgaatgc
1381 agcgactggg ggaaggcctt ccgtcacagt gcaaacctca cgaaccatca gaggactcac
1441 accggggaga agccctacaa gtgcagcgag tgtgggaagg ccttcagtta ctgcgcagcg
1501 ttcattcagc accagaggat tcacaccggg gagaagccct acagatgtgc cgcgtgtggg
1561 aaggccttca gccagagtgc aaacctcaca aaccatcaga ggactcacac tggggagaaa
1621 ccctacaagt gcagcgagtg tgggaaggcc ttcagccaga gtaccaatct cataatccac
1681 caaaagaccc acaccgggga gaagccatat aaatgtaatg aatgtgggaa attcttcagt
1741 gagagctcag ccctcattcg gcatcatata atccacaccg gagaaaaacc ttatgagtgt
1801 aatgagtgtg gtaaagcgtt taaccagagc tcatccctta gtcagcatca gagaatccac
1861 acaggcgtga aaccctacga atgcagcgag tgtgggaagg ccttccggtg cagctctgcc
1921 ttcgttagac atcagagact ccacgccgga gagtaactag gaaca
//