LOCUS AK316222 1940 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA, FLJ79121 complete cds, highly similar to Homo
sapiens S1 RNA binding domain 1 (SRBD1).
ACCESSION AK316222
VERSION AK316222.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1940)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1940
/cell_type="neutrophils"
/clone="NETRP2008780"
/clone_lib="NETRP2"
/db_xref="H-InvDB:HIT000499835"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, neutrophils"
/organism="Homo sapiens"
CDS 200..1744
/codon_start=1
/note="highly similar to Homo sapiens S1 RNA binding
domain 1 (SRBD1)"
/protein_id="BAH14593.1"
/transl_table=1
/translation="MKILYNSLNDSFKRLIYPLLCREFRAKLTSDAEKESVMMFGRNL
RQLLLTSPVPGRTLMGVDPGYKHGCKLAIISPTSQILHTDVVYLHCGQGFREAEKIKT
LLLNFNCSTVVIGNGTACRETEAYFADLIMKNYFAPLDVVYCIVSEAGASIYSVSPEA
NKEMPGLDPNLRSAVSIARRVQDPLAELVKIEPKHIGVGMYQHDVSQTLLKATLDSVV
EECVSFVGVDINICSEVLLRHIAGLNANRAKNIIEWREKNGPFINREQLKKVKGLGPK
SFQQCAGFIRINQDYIRTFCSQQTETSGQIQGVAVTSSADVEVTNEKQGKKKSRTAVN
VLLRPNPLDQTCIHPESYDIAMRFLSSIGGTLYEVGKPEMQQKINSFLEKEGMEKIAE
RLQTTVHTLQVIIDGLSQPESFDFRTDFDKPDFKRSIVCLEDLQIGTVLTGKVENATL
FGIFVDIGVGKSGLIPIRNVTEAKLSKTKKRRSLGLGPGERVEVQVLNIDIPRSRITL
DLIRVL"
BASE COUNT 610 a 366 c 435 g 529 t
ORIGIN
1 attatttctg ttaccttatt cccttctcca ccatgggtct tcctgtgtgt caggattttt
61 tattctggca attaaccgtg gagaaaattt gaaggtactg acggttaagg tcaatatttc
121 tgatggagtg aaggatgaat tctgtaggtg gtgcatccaa aacaggtgga gaccacgtag
181 ctttgcaagg ccagagttaa tgaagatctt atataattca ctgaatgatt cctttaaacg
241 ccttatttat cctcttctct gtagagaatt cagagccaaa ctaacatcag atgcagagaa
301 ggaatcagta atgatgtttg gacggaacct tcgtcagctc cttttaacaa gccctgttcc
361 agggcgcacc ttaatgggag tggatcctgg ttataaacat ggttgcaaat tagctataat
421 ttctcctact agtcagatac ttcatactga tgtggtttac ttgcattgtg gacaaggctt
481 ccgagaggcg gagaaaataa agacactttt gctgaatttc aactgcagca cagtagtgat
541 tggaaatgga actgcctgca gggaaacaga agcttacttt gctgacctga taatgaagaa
601 ttattttgca ccactggatg ttgtttactg tatcgtcagt gaagcaggag catcaatcta
661 cagtgtcagc cctgaagcta acaaagagat gccagggctg gaccctaatt tgagaagtgc
721 agtttccata gcaaggcgtg tacaagatcc attagctgag ctagtgaaaa ttgagccaaa
781 gcacattgga gttggaatgt atcagcatga cgtatcccag actttactca aggcaacact
841 ggacagtgtc gtagaagaat gtgtcagctt tgtgggagtg gatattaaca tctgttcaga
901 agttttgtta aggcatattg caggactcaa tgccaacagg gccaaaaata ttattgaatg
961 gcgagagaaa aatggaccct ttatcaaccg agaacagctg aagaaagtga aagggctggg
1021 cccaaaatcc ttccaacagt gtgctggctt catcagaatc aaccaggatt atatccgaac
1081 gttttgcagt cagcaaactg aaacttccgg ccaaattcaa ggagttgctg tgacatcttc
1141 agcagacgtt gaggtcacaa atgagaagca gggcaaaaag aagagcagaa ctgcagtgaa
1201 tgttttactg aggccaaatc ctttggacca aacttgtatt catccagaat catatgacat
1261 agcaatgagg tttttgtcat ccattggagg gacactgtat gaggttggaa agcctgaaat
1321 gcaacaaaaa ataaattcat tccttgaaaa ggaaggaatg gagaaaattg cagaaagatt
1381 gcaaacaaca gtacacacct tacaggtcat catagatggt ctcagccagc ctgaaagctt
1441 tgactttcga acagattttg ataaacctga tttcaagaga agcatagtat gcctggaaga
1501 tctgcagatt gggacagttc ttacaggcaa agttgagaat gccactctct ttggaatttt
1561 tgtggatata ggagtgggga aatctgggct gattcccata cgaaatgtaa cagaagcaaa
1621 actttcaaaa acaaagaaga gaagaagcct tggactgggc cccggagaaa gagtggaagt
1681 ccaagtactc aacattgaca tcccccgatc taggattact ctggacctca ttcgggtgtt
1741 atgagtatcc cacgaaggcc agacgctgat tttattttct catttccaca gattgacaag
1801 gataagtcag ttgtttgtaa actctaggta gcagatgaga aataattcac ttaatatcag
1861 aaatattttc caaacacttt cctttatttt ttcttctgaa taaatagaaa accaacagtt
1921 tgatttcctt ttcccttaaa
//